RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 TSPOP30536 169 aa19.24■□□□□ 0.67
U2AF1-208ENST00000471250 GATD1Q8NB37 220 aa19.24■□□□□ 0.67
U2AF1-208ENST00000471250 S100A8P05109 93 aa19.24■□□□□ 0.67
U2AF1-208ENST00000471250 C7orf71A4D174 169 aa19.23■□□□□ 0.67
U2AF1-208ENST00000471250 UBE2CO00762 179 aa19.23■□□□□ 0.67
U2AF1-208ENST00000471250 CDKN1BP46527 198 aa19.23■□□□□ 0.67
U2AF1-208ENST00000471250 SLAQ13239 276 aa19.23■□□□□ 0.67
U2AF1-208ENST00000471250 SSBP4Q9BWG4 385 aaPredicted RBP19.23■□□□□ 0.67
U2AF1-208ENST00000471250 F2Z2F3 143 aa19.22■□□□□ 0.67
U2AF1-208ENST00000471250 HOXA5P20719 270 aa19.22■□□□□ 0.67
U2AF1-208ENST00000471250 ZNF124Q15973 351 aa19.22■□□□□ 0.67
U2AF1-208ENST00000471250 ODF3L2Q3SX64 289 aa19.22■□□□□ 0.67
U2AF1-208ENST00000471250 NAGKQ9UJ70 344 aa19.22■□□□□ 0.67
U2AF1-208ENST00000471250 KIAA1644Q3SXP7 199 aa19.21■□□□□ 0.67
U2AF1-208ENST00000471250 ANXA2RQ3ZCQ2 193 aa19.21■□□□□ 0.67
U2AF1-208ENST00000471250 CNFNQ9BYD5 112 aa19.21■□□□□ 0.67
U2AF1-208ENST00000471250 COA6Q5JTJ3 125 aaKnown RBP19.2■□□□□ 0.66
U2AF1-208ENST00000471250 AGRNO00468 2067 aa19.2■□□□□ 0.66
U2AF1-208ENST00000471250 SORL1Q92673 2214 aa19.2■□□□□ 0.66
U2AF1-208ENST00000471250 M0R2Z0 102 aa19.2■□□□□ 0.66
U2AF1-208ENST00000471250 ZNF324O75467 553 aaPredicted RBP19.2■□□□□ 0.66
U2AF1-208ENST00000471250 CMC4P56277 68 aaPredicted RBP19.2■□□□□ 0.66
U2AF1-208ENST00000471250 SPINK13Q1W4C9 94 aa19.2■□□□□ 0.66
U2AF1-208ENST00000471250 GFI1BQ5VTD9 330 aa19.2■□□□□ 0.66
U2AF1-208ENST00000471250 TRAV12-3A0A0B4J271 114 aa19.18■□□□□ 0.66
U2AF1-208ENST00000471250 MUC21Q5SSG8 566 aa19.18■□□□□ 0.66
U2AF1-208ENST00000471250 TRAV12-2A0A075B6T6 113 aa19.17■□□□□ 0.66
U2AF1-208ENST00000471250 MUC21A0A0G2JKD1 596 aa19.17■□□□□ 0.66
U2AF1-208ENST00000471250 MUC21A0A140T8X8 626 aa19.17■□□□□ 0.66
U2AF1-208ENST00000471250 RBMY1BA6NDE4 496 aaKnown RBP19.17■□□□□ 0.66
U2AF1-208ENST00000471250 RBMY1EA6NEQ0 496 aaKnown RBP19.17■□□□□ 0.66
U2AF1-208ENST00000471250 SNAI2O43623 268 aa19.17■□□□□ 0.66
U2AF1-208ENST00000471250 OR5AL1P0C617 328 aa19.17■□□□□ 0.66
U2AF1-208ENST00000471250 RBMY1DP0C7P1 496 aaKnown RBP19.17■□□□□ 0.66
U2AF1-208ENST00000471250 ZNF493Q6ZR52 646 aa19.17■□□□□ 0.66
U2AF1-208ENST00000471250 CLUHP3Q96NS8 147 aa19.17■□□□□ 0.66
U2AF1-208ENST00000471250 OR11H12B2RN74 326 aa19.17■□□□□ 0.66
U2AF1-208ENST00000471250 KRTAP24-1Q3LI83 254 aa19.17■□□□□ 0.66
U2AF1-208ENST00000471250 DNLZQ5SXM8 178 aa19.17■□□□□ 0.66
U2AF1-208ENST00000471250 NTF3P20783 257 aa19.16■□□□□ 0.66
U2AF1-208ENST00000471250 BEAN1Q3B7T3 259 aa19.16■□□□□ 0.66
U2AF1-208ENST00000471250 SRIP30626 198 aa19.15■□□□□ 0.66
U2AF1-208ENST00000471250 ASIPP42127 132 aa19.15■□□□□ 0.66
U2AF1-208ENST00000471250 SSTP61278 116 aa19.15■□□□□ 0.66
U2AF1-208ENST00000471250 TWIST1Q15672 202 aa19.15■□□□□ 0.66
U2AF1-208ENST00000471250 PRR31Q5SQ13 230 aa19.15■□□□□ 0.66
U2AF1-208ENST00000471250 FAM159AQ6UWV7 190 aa19.15■□□□□ 0.66
U2AF1-208ENST00000471250 KCNS1Q96KK3 526 aa19.15■□□□□ 0.66
U2AF1-208ENST00000471250 MED14OSP0DP75 135 aa19.14■□□□□ 0.66
U2AF1-208ENST00000471250 Q0VG73 95 aa19.14■□□□□ 0.66
U2AF1-208ENST00000471250 FAM110AQ9BQ89 295 aa19.14■□□□□ 0.66
U2AF1-208ENST00000471250 H3BVH4 76 aa19.14■□□□□ 0.65
U2AF1-208ENST00000471250 GNRH2O43555 120 aa19.14■□□□□ 0.65
U2AF1-208ENST00000471250 FXYD7P58549 80 aa19.14■□□□□ 0.65
U2AF1-208ENST00000471250 CACNG7P62955 275 aa19.13■□□□□ 0.65
U2AF1-208ENST00000471250 TDRG1Q3Y452 100 aa19.13■□□□□ 0.65
U2AF1-208ENST00000471250 HIST3H2BBQ8N257 126 aa19.13■□□□□ 0.65
U2AF1-208ENST00000471250 ALKBH7Q9BT30 221 aaPredicted RBP19.13■□□□□ 0.65
U2AF1-208ENST00000471250 IGHV4-4A0A075B6R2 117 aa19.12■□□□□ 0.65
U2AF1-208ENST00000471250 LOC102724200A0A096LPH7 203 aaPredicted RBP19.12■□□□□ 0.65
U2AF1-208ENST00000471250 CRXO43186 299 aaPredicted RBP19.12■□□□□ 0.65
U2AF1-208ENST00000471250 S100A4P26447 101 aaKnown RBP19.12■□□□□ 0.65
U2AF1-208ENST00000471250 OR10AG1Q8NH19 301 aa19.12■□□□□ 0.65
U2AF1-208ENST00000471250 MSRB1Q9NZV6 116 aa19.12■□□□□ 0.65
U2AF1-208ENST00000471250 INSL3P51460 131 aa19.11■□□□□ 0.65
U2AF1-208ENST00000471250 OR10J3Q5JRS4 329 aa19.11■□□□□ 0.65
U2AF1-208ENST00000471250 TP53TG3Q9ULZ0 132 aa19.11■□□□□ 0.65
U2AF1-208ENST00000471250 STHQ8IWL8 128 aa19.11■□□□□ 0.65
U2AF1-208ENST00000471250 SCRT2Q9NQ03 307 aa19.11■□□□□ 0.65
U2AF1-208ENST00000471250 CD7P09564 240 aa19.1■□□□□ 0.65
U2AF1-208ENST00000471250 C9orf66Q5T8R8 295 aa19.1■□□□□ 0.65
U2AF1-208ENST00000471250 TMEM191AQ9H0A3 160 aa19.1■□□□□ 0.65
U2AF1-208ENST00000471250 C19orf73Q9NVV2 129 aa19.1■□□□□ 0.65
U2AF1-208ENST00000471250 IGHV1OR15-1A0A075B7D0 117 aa19.09■□□□□ 0.65
U2AF1-208ENST00000471250 RNASE3P12724 160 aaKnown RBP19.09■□□□□ 0.65
U2AF1-208ENST00000471250 FAM104BQ5XKR9 115 aa19.09■□□□□ 0.65
U2AF1-208ENST00000471250 TRPT1Q86TN4 253 aaKnown RBP19.09■□□□□ 0.65
U2AF1-208ENST00000471250 SPATA3Q8NHX4 192 aa19.09■□□□□ 0.65
U2AF1-208ENST00000471250 IFITM10A6NMD0 228 aa19.08■□□□□ 0.65
U2AF1-208ENST00000471250 SPANXN1Q5VSR9 72 aa19.08■□□□□ 0.65
U2AF1-208ENST00000471250 PRIMA1Q86XR5 153 aa19.08■□□□□ 0.65
U2AF1-208ENST00000471250 TIMM8BQ9Y5J9 83 aaPredicted RBP19.08■□□□□ 0.65
U2AF1-208ENST00000471250 PDZD11Q5EBL8 140 aa19.08■□□□□ 0.64
U2AF1-208ENST00000471250 DMRTA1Q5VZB9 504 aa19.08■□□□□ 0.64
U2AF1-208ENST00000471250 TMEM256Q8N2U0 113 aa19.08■□□□□ 0.64
U2AF1-208ENST00000471250 RBMY1A1P0DJD3 496 aaKnown RBP19.07■□□□□ 0.64
U2AF1-208ENST00000471250 RBMY1CP0DJD4 496 aa19.07■□□□□ 0.64
U2AF1-208ENST00000471250 RBMY1FQ15415 496 aaKnown RBP19.07■□□□□ 0.64
U2AF1-208ENST00000471250 BAGE3Q86Y29 109 aa19.07■□□□□ 0.64
U2AF1-208ENST00000471250 AMN1Q8IY45 258 aa19.07■□□□□ 0.64
U2AF1-208ENST00000471250 C18orf32Q8TCD1 76 aa19.07■□□□□ 0.64
U2AF1-208ENST00000471250 ZNF747Q9BV97 191 aa19.07■□□□□ 0.64
U2AF1-208ENST00000471250 AMBPP02760 352 aa19.06■□□□□ 0.64
U2AF1-208ENST00000471250 AKR1D1P51857 326 aa19.05■□□□□ 0.64
U2AF1-208ENST00000471250 S100A2P29034 98 aa19.05■□□□□ 0.64
U2AF1-208ENST00000471250 LINC00310P59036 64 aa19.05■□□□□ 0.64
U2AF1-208ENST00000471250 PHLDA3Q9Y5J5 127 aa19.05■□□□□ 0.64
U2AF1-208ENST00000471250 JMJD1CQ15652 2540 aa19.04■□□□□ 0.64
U2AF1-208ENST00000471250 IGHV3-16A0A0C4DH30 117 aa19.04■□□□□ 0.64
U2AF1-208ENST00000471250 NUPR1O60356 82 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms