RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 SPRY2O43597 315 aa6.13□□□□□ -1.43
GTF3A-206ENST00000470606 TMEM136Q6ZRR5 245 aa6.13□□□□□ -1.43
GTF3A-206ENST00000470606 WFDC9Q8NEX5 89 aa6.13□□□□□ -1.43
GTF3A-206ENST00000470606 DNAH3Q8TD57 4116 aa6.13□□□□□ -1.43
GTF3A-206ENST00000470606 TRAV12-3A0A0B4J271 114 aa6.12□□□□□ -1.43
GTF3A-206ENST00000470606 HIST1H2BKO60814 126 aa6.12□□□□□ -1.43
GTF3A-206ENST00000470606 PRM2P04554 102 aa6.12□□□□□ -1.43
GTF3A-206ENST00000470606 HIST1H2BJP06899 126 aa6.12□□□□□ -1.43
GTF3A-206ENST00000470606 HIST1H2BOP23527 126 aa6.12□□□□□ -1.43
GTF3A-206ENST00000470606 HIST1H2BBP33778 126 aa6.12□□□□□ -1.43
GTF3A-206ENST00000470606 HIST1H2BDP58876 126 aa6.12□□□□□ -1.43
GTF3A-206ENST00000470606 HIST1H2BCP62807 126 aa6.12□□□□□ -1.43
GTF3A-206ENST00000470606 FABP9Q0Z7S8 132 aa6.12□□□□□ -1.43
GTF3A-206ENST00000470606 HIST2H2BEQ16778 126 aa6.12□□□□□ -1.43
GTF3A-206ENST00000470606 ANXA2RQ3ZCQ2 193 aa6.12□□□□□ -1.43
GTF3A-206ENST00000470606 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.12□□□□□ -1.43
GTF3A-206ENST00000470606 LYZL1Q6UWQ5 148 aa6.12□□□□□ -1.43
GTF3A-206ENST00000470606 HIST1H2BHQ93079 126 aa6.12□□□□□ -1.43
GTF3A-206ENST00000470606 ODF3Q96PU9 254 aa6.12□□□□□ -1.43
GTF3A-206ENST00000470606 HIST1H2BNQ99877 126 aa6.12□□□□□ -1.43
GTF3A-206ENST00000470606 HIST1H2BMQ99879 126 aa6.12□□□□□ -1.43
GTF3A-206ENST00000470606 MSRB1Q9NZV6 116 aa6.12□□□□□ -1.43
GTF3A-206ENST00000470606 GNRH2O43555 120 aa6.11□□□□□ -1.43
GTF3A-206ENST00000470606 CDKN1BP46527 198 aa6.11□□□□□ -1.43
GTF3A-206ENST00000470606 SSTP61278 116 aa6.11□□□□□ -1.43
GTF3A-206ENST00000470606 SLAQ13239 276 aa6.11□□□□□ -1.43
GTF3A-206ENST00000470606 TPPP3Q9BW30 176 aa6.11□□□□□ -1.43
GTF3A-206ENST00000470606 SSBP4Q9BWG4 385 aaPredicted RBP6.11□□□□□ -1.43
GTF3A-206ENST00000470606 TP53TG3Q9ULZ0 132 aa6.11□□□□□ -1.43
GTF3A-206ENST00000470606 TRAV21A0A0B4J279 112 aa6.11□□□□□ -1.43
GTF3A-206ENST00000470606 C7orf71A4D174 169 aa6.11□□□□□ -1.43
GTF3A-206ENST00000470606 SNURFLB1AK76 121 aa6.11□□□□□ -1.43
GTF3A-206ENST00000470606 DUSP14O95147 198 aaKnown RBP6.11□□□□□ -1.43
GTF3A-206ENST00000470606 GIG44P09565 113 aaPredicted RBP6.11□□□□□ -1.43
GTF3A-206ENST00000470606 TRGC1P0CF51 173 aa6.11□□□□□ -1.43
GTF3A-206ENST00000470606 IGLL1P15814 213 aa6.11□□□□□ -1.43
GTF3A-206ENST00000470606 CTRLP40313 264 aa6.11□□□□□ -1.43
GTF3A-206ENST00000470606 CAMPP49913 170 aa6.11□□□□□ -1.43
GTF3A-206ENST00000470606 NAGKQ9UJ70 344 aa6.11□□□□□ -1.43
GTF3A-206ENST00000470606 C1orf196B1AJZ1 125 aa6.1□□□□□ -1.43
GTF3A-206ENST00000470606 OR11H12B2RN74 326 aa6.1□□□□□ -1.43
GTF3A-206ENST00000470606 RNASE3P12724 160 aaKnown RBP6.1□□□□□ -1.43
GTF3A-206ENST00000470606 KIAA1644Q3SXP7 199 aa6.1□□□□□ -1.43
GTF3A-206ENST00000470606 TRPT1Q86TN4 253 aaKnown RBP6.1□□□□□ -1.43
GTF3A-206ENST00000470606 FER1L6-AS1Q8NA97 138 aa6.1□□□□□ -1.43
GTF3A-206ENST00000470606 OR2K2Q8NGT1 345 aa6.1□□□□□ -1.43
GTF3A-206ENST00000470606 OR10AG1Q8NH19 301 aa6.1□□□□□ -1.43
GTF3A-206ENST00000470606 GNB1LQ9BYB4 327 aa6.1□□□□□ -1.43
GTF3A-206ENST00000470606 CNFNQ9BYD5 112 aa6.1□□□□□ -1.43
GTF3A-206ENST00000470606 MRPL18Q9H0U6 180 aaKnown RBP6.1□□□□□ -1.43
GTF3A-206ENST00000470606 TRAPPC1Q9Y5R8 145 aa6.1□□□□□ -1.43
GTF3A-206ENST00000470606 A0A1B0GUT8 65 aa6.09□□□□□ -1.43
GTF3A-206ENST00000470606 LEPP41159 167 aa6.09□□□□□ -1.43
GTF3A-206ENST00000470606 C3orf56Q8N813 242 aa6.09□□□□□ -1.43
GTF3A-206ENST00000470606 NACAE9PAV3 2078 aa6.09□□□□□ -1.43
GTF3A-206ENST00000470606 LOC105371267A0A1B0GV96 52 aa6.09□□□□□ -1.44
GTF3A-206ENST00000470606 H3BVH4 76 aa6.09□□□□□ -1.44
GTF3A-206ENST00000470606 WIPF1O43516 503 aa6.09□□□□□ -1.44
GTF3A-206ENST00000470606 NTF3P20783 257 aa6.09□□□□□ -1.44
GTF3A-206ENST00000470606 RIPPLY3P57055 190 aa6.09□□□□□ -1.44
GTF3A-206ENST00000470606 RPS20P60866 119 aaKnown RBP6.09□□□□□ -1.44
GTF3A-206ENST00000470606 RAB4BP61018 213 aa6.09□□□□□ -1.44
GTF3A-206ENST00000470606 HBBP68871 147 aa6.09□□□□□ -1.44
GTF3A-206ENST00000470606 TDRG1Q3Y452 100 aa6.09□□□□□ -1.44
GTF3A-206ENST00000470606 C9orf66Q5T8R8 295 aa6.09□□□□□ -1.44
GTF3A-206ENST00000470606 ATP5L2Q7Z4Y8 100 aa6.09□□□□□ -1.44
GTF3A-206ENST00000470606 CLUHP3Q96NS8 147 aa6.09□□□□□ -1.44
GTF3A-206ENST00000470606 FAM110AQ9BQ89 295 aa6.09□□□□□ -1.44
GTF3A-206ENST00000470606 MDFICQ9P1T7 246 aa6.09□□□□□ -1.44
GTF3A-206ENST00000470606 SNAI2O43623 268 aa6.08□□□□□ -1.44
GTF3A-206ENST00000470606 INSL3P51460 131 aa6.08□□□□□ -1.44
GTF3A-206ENST00000470606 RAB5BP61020 215 aa6.08□□□□□ -1.44
GTF3A-206ENST00000470606 RASL11AQ6T310 242 aa6.08□□□□□ -1.44
GTF3A-206ENST00000470606 Q8N1Y9 231 aa6.08□□□□□ -1.44
GTF3A-206ENST00000470606 DEFB125Q8N687 156 aa6.08□□□□□ -1.44
GTF3A-206ENST00000470606 MDFIQ99750 246 aa6.08□□□□□ -1.44
GTF3A-206ENST00000470606 SCRT2Q9NQ03 307 aa6.08□□□□□ -1.44
GTF3A-206ENST00000470606 XCL2Q9UBD3 114 aa6.08□□□□□ -1.44
GTF3A-206ENST00000470606 TENM3Q9P273 2699 aa6.08□□□□□ -1.44
GTF3A-206ENST00000470606 XKRY2A2RUG3 117 aa6.07□□□□□ -1.44
GTF3A-206ENST00000470606 F2Z2F3 143 aa6.07□□□□□ -1.44
GTF3A-206ENST00000470606 OR5AL1P0C617 328 aa6.07□□□□□ -1.44
GTF3A-206ENST00000470606 TSPOP30536 169 aa6.07□□□□□ -1.44
GTF3A-206ENST00000470606 OXLD1Q5BKU9 147 aa6.07□□□□□ -1.44
GTF3A-206ENST00000470606 SHISA2Q6UWI4 295 aa6.07□□□□□ -1.44
GTF3A-206ENST00000470606 C12orf54Q6X4T0 127 aa6.07□□□□□ -1.44
GTF3A-206ENST00000470606 C1orf158Q8N1D5 194 aa6.07□□□□□ -1.44
GTF3A-206ENST00000470606 GATD1Q8NB37 220 aa6.07□□□□□ -1.44
GTF3A-206ENST00000470606 TMEM158Q8WZ71 300 aa6.07□□□□□ -1.44
GTF3A-206ENST00000470606 TIMM8BQ9Y5J9 83 aaPredicted RBP6.07□□□□□ -1.44
GTF3A-206ENST00000470606 IGHV3-16A0A0C4DH30 117 aa6.07□□□□□ -1.44
GTF3A-206ENST00000470606 C5orf52A6NGY3 159 aa6.07□□□□□ -1.44
GTF3A-206ENST00000470606 IFITM10A6NMD0 228 aa6.07□□□□□ -1.44
GTF3A-206ENST00000470606 GAS8-AS1O95177 125 aa6.07□□□□□ -1.44
GTF3A-206ENST00000470606 HLA-DQA1P01909 254 aa6.07□□□□□ -1.44
GTF3A-206ENST00000470606 RPL35AP18077 110 aaKnown RBP6.07□□□□□ -1.44
GTF3A-206ENST00000470606 LINC00310P59036 64 aa6.07□□□□□ -1.44
GTF3A-206ENST00000470606 SNRPEP62304 92 aaKnown RBP6.07□□□□□ -1.44
GTF3A-206ENST00000470606 DNLZQ5SXM8 178 aa6.07□□□□□ -1.44
GTF3A-206ENST00000470606 WDR73Q6P4I2 378 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms