RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 MLH3Q9UHC1 1453 aa1.25□□□□□ -2.21
BRCA2-202ENST00000470094 DISP2A7MBM2 1401 aa1.25□□□□□ -2.21
BRCA2-202ENST00000470094 ALPK3Q96L96 1907 aa1.25□□□□□ -2.21
BRCA2-202ENST00000470094 BRWD1Q9NSI6 2320 aa1.25□□□□□ -2.21
BRCA2-202ENST00000470094 TRAV10A0A0B4J240 114 aa1.25□□□□□ -2.21
BRCA2-202ENST00000470094 PNMA8CA0A1B0GUJ8 204 aa1.25□□□□□ -2.21
BRCA2-202ENST00000470094 ERC2-IT1O76042 136 aa1.25□□□□□ -2.21
BRCA2-202ENST00000470094 TNFP01375 233 aa1.25□□□□□ -2.21
BRCA2-202ENST00000470094 MT-ND4LP03901 98 aa1.25□□□□□ -2.21
BRCA2-202ENST00000470094 IL7P13232 177 aa1.25□□□□□ -2.21
BRCA2-202ENST00000470094 TPT1P13693 172 aaKnown RBP1.25□□□□□ -2.21
BRCA2-202ENST00000470094 GNG4P50150 75 aa1.25□□□□□ -2.21
BRCA2-202ENST00000470094 NCS1P62166 190 aa1.25□□□□□ -2.21
BRCA2-202ENST00000470094 RPS25P62851 125 aaKnown RBP1.25□□□□□ -2.21
BRCA2-202ENST00000470094 HSD52Q0P140 79 aa1.25□□□□□ -2.21
BRCA2-202ENST00000470094 TMEM244Q5VVB8 128 aa1.25□□□□□ -2.21
BRCA2-202ENST00000470094 C2orf82Q6UX34 121 aa1.25□□□□□ -2.21
BRCA2-202ENST00000470094 OR5AS1Q8N127 324 aa1.25□□□□□ -2.21
BRCA2-202ENST00000470094 OR4C12Q96R67 309 aa1.25□□□□□ -2.21
BRCA2-202ENST00000470094 SAR1AQ9NR31 198 aa1.25□□□□□ -2.21
BRCA2-202ENST00000470094 BOKQ9UMX3 212 aaPredicted RBP1.25□□□□□ -2.21
BRCA2-202ENST00000470094 TNFSF18Q9UNG2 199 aa1.25□□□□□ -2.21
BRCA2-202ENST00000470094 MPC1Q9Y5U8 109 aa1.25□□□□□ -2.21
BRCA2-202ENST00000470094 LAMB4A4D0S4 1761 aa1.25□□□□□ -2.21
BRCA2-202ENST00000470094 SYNJ1O43426 1573 aa1.25□□□□□ -2.21
BRCA2-202ENST00000470094 ADGRB2O60241 1585 aa1.25□□□□□ -2.21
BRCA2-202ENST00000470094 INO80Q9ULG1 1556 aaPredicted RBP1.25□□□□□ -2.21
BRCA2-202ENST00000470094 MAPKBP1O60336 1514 aa1.25□□□□□ -2.21
BRCA2-202ENST00000470094 FYCO1Q9BQS8 1478 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 NRXN1Q9ULB1 1477 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 KIAA1549LQ6ZVL6 1849 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.24□□□□□ -2.21
BRCA2-202ENST00000470094 LOC107986453A0A1B0GWG9 222 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 GNG7O60262 68 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 HYPMO75409 117 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 MPC2O95563 127 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 TRACP01848 142 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 SLC25A5P05141 298 aaKnown RBP1.24□□□□□ -2.21
BRCA2-202ENST00000470094 CXCL8P10145 99 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 LSM3P62310 102 aaKnown RBP1.24□□□□□ -2.21
BRCA2-202ENST00000470094 GNGT1P63211 74 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 Q6ZS92 163 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 GKN2Q86XP6 184 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 SNX29P2Q8IUI4 249 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 CLECL1Q8IZS7 167 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 LINC00269Q8N2A0 174 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 TTC9CQ8N5M4 171 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 DEFB119Q8N690 84 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 PATE1Q8WXA2 126 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 CLEC2BQ92478 149 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 RAB37Q96AX2 223 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 LINC00052Q96N35 136 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 SDF2Q99470 211 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 RERGLQ9H628 205 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 TAS2R8Q9NYW2 309 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 AP4S1Q9Y587 144 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 PTPRFP10586 1907 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 MYH1P12882 1939 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 CEP192Q8TEP8 1941 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 FREM1Q5H8C1 2179 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 GOLGA3Q08378 1498 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 NCOA2Q15596 1464 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 TEX14Q8IWB6 1497 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 TENM1Q9UKZ4 2725 aa1.24□□□□□ -2.21
BRCA2-202ENST00000470094 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.23□□□□□ -2.21
BRCA2-202ENST00000470094 ANKRD26Q9UPS8 1709 aa1.23□□□□□ -2.21
BRCA2-202ENST00000470094 TANC2Q9HCD6 1990 aa1.23□□□□□ -2.21
BRCA2-202ENST00000470094 RP1P56715 2156 aa1.23□□□□□ -2.21
BRCA2-202ENST00000470094 ADAMTS12P58397 1594 aa1.23□□□□□ -2.21
BRCA2-202ENST00000470094 IGKV3D-7A0A0C4DH55 119 aa1.23□□□□□ -2.21
BRCA2-202ENST00000470094 IGKV3OR2-268A0A0C4DH90 116 aa1.23□□□□□ -2.21
BRCA2-202ENST00000470094 LOC100130705A0A1B0GUX0 176 aa1.23□□□□□ -2.21
BRCA2-202ENST00000470094 M0R2Z0 102 aa1.23□□□□□ -2.21
BRCA2-202ENST00000470094 TCRAP04437 139 aa1.23□□□□□ -2.21
BRCA2-202ENST00000470094 IGLC1P0CG04 106 aa1.23□□□□□ -2.21
BRCA2-202ENST00000470094 DIAPH2-AS1Q14236 149 aa1.23□□□□□ -2.21
BRCA2-202ENST00000470094 GLIPR1L1Q6UWM5 242 aa1.23□□□□□ -2.21
BRCA2-202ENST00000470094 TMEM91Q6ZNR0 172 aa1.23□□□□□ -2.21
BRCA2-202ENST00000470094 TEN1Q86WV5 123 aa1.23□□□□□ -2.21
BRCA2-202ENST00000470094 SVBPQ8N300 66 aa1.23□□□□□ -2.21
BRCA2-202ENST00000470094 C10orf111Q8N326 155 aa1.23□□□□□ -2.21
BRCA2-202ENST00000470094 MMGT1Q8N4V1 131 aa1.23□□□□□ -2.21
BRCA2-202ENST00000470094 C5orf17Q8NAS9 161 aa1.23□□□□□ -2.21
BRCA2-202ENST00000470094 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.23□□□□□ -2.21
BRCA2-202ENST00000470094 OR10AC1Q8NH08 325 aa1.23□□□□□ -2.21
BRCA2-202ENST00000470094 ZNF431Q8TF32 576 aaPredicted RBP1.23□□□□□ -2.21
BRCA2-202ENST00000470094 AP1S3Q96PC3 154 aa1.23□□□□□ -2.21
BRCA2-202ENST00000470094 S100A13Q99584 98 aa1.23□□□□□ -2.21
BRCA2-202ENST00000470094 SNRNP25Q9BV90 132 aaKnown RBP1.23□□□□□ -2.21
BRCA2-202ENST00000470094 BANF2Q9H503 90 aa1.23□□□□□ -2.21
BRCA2-202ENST00000470094 CLASP1Q7Z460 1538 aa1.23□□□□□ -2.21
BRCA2-202ENST00000470094 A2ML1A8K2U0 1454 aa1.23□□□□□ -2.21
BRCA2-202ENST00000470094 MYOM2P54296 1465 aa1.23□□□□□ -2.21
BRCA2-202ENST00000470094 GRIN2AQ12879 1464 aa1.23□□□□□ -2.21
BRCA2-202ENST00000470094 KIAA1549Q9HCM3 1950 aa1.23□□□□□ -2.21
BRCA2-202ENST00000470094 MYH6P13533 1939 aa1.23□□□□□ -2.21
BRCA2-202ENST00000470094 MGAMO43451 1857 aa1.22□□□□□ -2.21
BRCA2-202ENST00000470094 MYO18AQ92614 2054 aaKnown RBP1.22□□□□□ -2.21
BRCA2-202ENST00000470094 HEATR5BQ9P2D3 2071 aa1.22□□□□□ -2.21
BRCA2-202ENST00000470094 POLEQ07864 2286 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms