RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 C2orf91Q6ZV80 131 aa11.11□□□□□ -0.63
CBWD3-205ENST00000469687 ERASQ7Z444 233 aa11.11□□□□□ -0.63
CBWD3-205ENST00000469687 RHPN1-AS1Q9BWJ2 59 aa11.11□□□□□ -0.63
CBWD3-205ENST00000469687 USP24Q9UPU5 2620 aa11.11□□□□□ -0.63
CBWD3-205ENST00000469687 LINC01546A6NGU7 62 aa11.11□□□□□ -0.63
CBWD3-205ENST00000469687 BRI3O95415 125 aa11.11□□□□□ -0.63
CBWD3-205ENST00000469687 IGHV4-59P01825 116 aa11.11□□□□□ -0.63
CBWD3-205ENST00000469687 COX11Q9Y6N1 276 aa11.11□□□□□ -0.63
CBWD3-205ENST00000469687 IGLV2-18A0A075B6J9 118 aa11.1□□□□□ -0.63
CBWD3-205ENST00000469687 FGF6P10767 208 aa11.1□□□□□ -0.63
CBWD3-205ENST00000469687 NRACQ8N912 160 aa11.1□□□□□ -0.63
CBWD3-205ENST00000469687 OR2K2Q8NGT1 345 aa11.1□□□□□ -0.63
CBWD3-205ENST00000469687 OR10J6PQ8NGY7 276 aa11.1□□□□□ -0.63
CBWD3-205ENST00000469687 DEFB112Q30KQ8 113 aa11.1□□□□□ -0.63
CBWD3-205ENST00000469687 ZNF462Q96JM2 2506 aa11.09□□□□□ -0.63
CBWD3-205ENST00000469687 FCER1GP30273 86 aa11.09□□□□□ -0.63
CBWD3-205ENST00000469687 ORAOV1Q8WV07 137 aa11.09□□□□□ -0.63
CBWD3-205ENST00000469687 TMEM158Q8WZ71 300 aa11.09□□□□□ -0.63
CBWD3-205ENST00000469687 LINC00477Q96M19 166 aa11.09□□□□□ -0.63
CBWD3-205ENST00000469687 NXT2Q9NPJ8 142 aaKnown RBP11.09□□□□□ -0.63
CBWD3-205ENST00000469687 LENEPQ9Y5L5 61 aa11.09□□□□□ -0.63
CBWD3-205ENST00000469687 MXRA5Q9NR99 2828 aa11.09□□□□□ -0.63
CBWD3-205ENST00000469687 IGHV4-4A0A075B6R2 117 aa11.09□□□□□ -0.63
CBWD3-205ENST00000469687 M0R381 172 aa11.09□□□□□ -0.63
CBWD3-205ENST00000469687 DAZ1Q9NQZ3 744 aaKnown RBP11.09□□□□□ -0.63
CBWD3-205ENST00000469687 MUC4Q99102 2169 aa11.08□□□□□ -0.64
CBWD3-205ENST00000469687 LRRK2Q5S007 2527 aa11.08□□□□□ -0.64
CBWD3-205ENST00000469687 OVOL1O14753 267 aa11.08□□□□□ -0.64
CBWD3-205ENST00000469687 RNASE4P34096 147 aaKnown RBP11.08□□□□□ -0.64
CBWD3-205ENST00000469687 Q8N8P6 123 aa11.08□□□□□ -0.64
CBWD3-205ENST00000469687 ZNF469Q96JG9 3925 aaPredicted RBP11.08□□□□□ -0.64
CBWD3-205ENST00000469687 A0A0G2JLM5 398 aa11.07□□□□□ -0.64
CBWD3-205ENST00000469687 CCL25O15444 150 aa11.07□□□□□ -0.64
CBWD3-205ENST00000469687 ANXA2RQ3ZCQ2 193 aa11.07□□□□□ -0.64
CBWD3-205ENST00000469687 SMIM15Q7Z3B0 74 aa11.07□□□□□ -0.64
CBWD3-205ENST00000469687 A0A096LNT2 108 aa11.07□□□□□ -0.64
CBWD3-205ENST00000469687 TRAV21A0A0B4J279 112 aa11.07□□□□□ -0.64
CBWD3-205ENST00000469687 WFDC12Q8WWY7 111 aa11.07□□□□□ -0.64
CBWD3-205ENST00000469687 FAM19A4Q96LR4 140 aa11.07□□□□□ -0.64
CBWD3-205ENST00000469687 PEF1Q9UBV8 284 aaKnown RBP11.07□□□□□ -0.64
CBWD3-205ENST00000469687 AGRNO00468 2067 aa11.06□□□□□ -0.64
CBWD3-205ENST00000469687 TAX1BP3O14907 124 aa11.06□□□□□ -0.64
CBWD3-205ENST00000469687 GNRH2O43555 120 aa11.06□□□□□ -0.64
CBWD3-205ENST00000469687 PSMB8P28062 276 aa11.06□□□□□ -0.64
CBWD3-205ENST00000469687 SMPXQ9UHP9 88 aa11.06□□□□□ -0.64
CBWD3-205ENST00000469687 TMEM8BA6NDV4 472 aa11.06□□□□□ -0.64
CBWD3-205ENST00000469687 CD5LO43866 347 aa11.06□□□□□ -0.64
CBWD3-205ENST00000469687 ODF1Q14990 250 aa11.06□□□□□ -0.64
CBWD3-205ENST00000469687 C12orf54Q6X4T0 127 aa11.06□□□□□ -0.64
CBWD3-205ENST00000469687 PCP2Q8IVA1 136 aa11.06□□□□□ -0.64
CBWD3-205ENST00000469687 DPF1Q92782 380 aa11.06□□□□□ -0.64
CBWD3-205ENST00000469687 SORL1Q92673 2214 aa11.06□□□□□ -0.64
CBWD3-205ENST00000469687 S100A4P26447 101 aaKnown RBP11.05□□□□□ -0.64
CBWD3-205ENST00000469687 LINC01356Q8N9X3 169 aa11.05□□□□□ -0.64
CBWD3-205ENST00000469687 PTPN13Q12923 2485 aa11.05□□□□□ -0.64
CBWD3-205ENST00000469687 A1L4Q6 167 aa11.04□□□□□ -0.64
CBWD3-205ENST00000469687 TGFAP01135 160 aa11.04□□□□□ -0.64
CBWD3-205ENST00000469687 PRSS1P07477 247 aa11.04□□□□□ -0.64
CBWD3-205ENST00000469687 NMUP48645 174 aa11.04□□□□□ -0.64
CBWD3-205ENST00000469687 PTTG1IPP53801 180 aa11.04□□□□□ -0.64
CBWD3-205ENST00000469687 BOD1L2Q8IYS8 172 aa11.04□□□□□ -0.64
CBWD3-205ENST00000469687 DEFB125Q8N687 156 aa11.04□□□□□ -0.64
CBWD3-205ENST00000469687 C14orf178Q8N769 122 aaPredicted RBP11.04□□□□□ -0.64
CBWD3-205ENST00000469687 OR1N2Q8NGR9 330 aa11.04□□□□□ -0.64
CBWD3-205ENST00000469687 BBC3Q96PG8 261 aaPredicted RBP11.04□□□□□ -0.64
CBWD3-205ENST00000469687 CR1P17927 2039 aa11.04□□□□□ -0.64
CBWD3-205ENST00000469687 SMIM17P0DL12 118 aa11.04□□□□□ -0.64
CBWD3-205ENST00000469687 FOXC2Q99958 501 aa11.04□□□□□ -0.64
CBWD3-205ENST00000469687 IGKV2D-26A0A0A0MRZ7 120 aa11.03□□□□□ -0.64
CBWD3-205ENST00000469687 GATA3P23771 443 aa11.03□□□□□ -0.64
CBWD3-205ENST00000469687 ASIPP42127 132 aa11.03□□□□□ -0.64
CBWD3-205ENST00000469687 DCANP1Q8TF63 244 aa11.03□□□□□ -0.64
CBWD3-205ENST00000469687 RPL39LQ96EH5 51 aaKnown RBP11.03□□□□□ -0.64
CBWD3-205ENST00000469687 PHLDA3Q9Y5J5 127 aa11.03□□□□□ -0.64
CBWD3-205ENST00000469687 ABCA12Q86UK0 2595 aa11.03□□□□□ -0.64
CBWD3-205ENST00000469687 NBPF19A0A087WUL8 3843 aa11.03□□□□□ -0.64
CBWD3-205ENST00000469687 CBY3A6NI87 242 aa11.03□□□□□ -0.64
CBWD3-205ENST00000469687 PRSS47A8MTI9 375 aa11.03□□□□□ -0.64
CBWD3-205ENST00000469687 RNASE3P12724 160 aaKnown RBP11.03□□□□□ -0.64
CBWD3-205ENST00000469687 SLC25A16P16260 332 aa11.03□□□□□ -0.64
CBWD3-205ENST00000469687 DSCR9P59020 149 aa11.03□□□□□ -0.64
CBWD3-205ENST00000469687 LAGE3Q14657 143 aa11.03□□□□□ -0.64
CBWD3-205ENST00000469687 TTTY13Q9BZ97 58 aa11.03□□□□□ -0.64
CBWD3-205ENST00000469687 HHLA3Q9XRX5 114 aa11.03□□□□□ -0.64
CBWD3-205ENST00000469687 SRSF1Q07955 248 aaKnown RBP eCLIP11.02□□□□□ -0.65
CBWD3-205ENST00000469687 UBE2V1Q13404 147 aa11.02□□□□□ -0.65
CBWD3-205ENST00000469687 APRG1Q8IVJ8 170 aa11.02□□□□□ -0.65
CBWD3-205ENST00000469687 RASL10AQ92737 203 aa11.02□□□□□ -0.65
CBWD3-205ENST00000469687 ZMAT4Q9H898 229 aa11.02□□□□□ -0.65
CBWD3-205ENST00000469687 TEX15Q9BXT5 2789 aa11.02□□□□□ -0.65
CBWD3-205ENST00000469687 C7orf71A4D174 169 aa11.01□□□□□ -0.65
CBWD3-205ENST00000469687 RNF223E7ERA6 249 aa11.01□□□□□ -0.65
CBWD3-205ENST00000469687 TMEM97Q5BJF2 176 aa11.01□□□□□ -0.65
CBWD3-205ENST00000469687 MRAP2Q96G30 205 aa11.01□□□□□ -0.65
CBWD3-205ENST00000469687 SMIM2Q9BVW6 85 aa11.01□□□□□ -0.65
CBWD3-205ENST00000469687 UBR5O95071 2799 aaPredicted RBP11.01□□□□□ -0.65
CBWD3-205ENST00000469687 K7EMT4 169 aa11□□□□□ -0.65
CBWD3-205ENST00000469687 MGPP08493 103 aa11□□□□□ -0.65
CBWD3-205ENST00000469687 KRTAP10-9P60411 292 aa11□□□□□ -0.65
CBWD3-205ENST00000469687 VAMP3Q15836 100 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms