RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 S100A8P05109 93 aa14.08□□□□□ -0.16
SMC4-209ENST00000468653 SSTP61278 116 aa14.08□□□□□ -0.16
SMC4-209ENST00000468653 OR2K2Q8NGT1 345 aa14.08□□□□□ -0.16
SMC4-209ENST00000468653 C7orf71A4D174 169 aa14.07□□□□□ -0.16
SMC4-209ENST00000468653 H3BMM0 161 aa14.07□□□□□ -0.16
SMC4-209ENST00000468653 M0R2Z0 102 aa14.07□□□□□ -0.16
SMC4-209ENST00000468653 CTRLP40313 264 aa14.07□□□□□ -0.16
SMC4-209ENST00000468653 CDKN1BP46527 198 aa14.07□□□□□ -0.16
SMC4-209ENST00000468653 ZNF124Q15973 351 aa14.07□□□□□ -0.16
SMC4-209ENST00000468653 SSBP4Q9BWG4 385 aaPredicted RBP14.07□□□□□ -0.16
SMC4-209ENST00000468653 MUC21A0A0G2JKD1 596 aa14.06□□□□□ -0.16
SMC4-209ENST00000468653 MUC21A0A140T8X8 626 aa14.06□□□□□ -0.16
SMC4-209ENST00000468653 SPINK13Q1W4C9 94 aa14.06□□□□□ -0.16
SMC4-209ENST00000468653 KIAA1644Q3SXP7 199 aa14.06□□□□□ -0.16
SMC4-209ENST00000468653 MUC21Q5SSG8 566 aa14.06□□□□□ -0.16
SMC4-209ENST00000468653 AGRNO00468 2067 aa14.06□□□□□ -0.16
SMC4-209ENST00000468653 TRAV12-3A0A0B4J271 114 aa14.06□□□□□ -0.16
SMC4-209ENST00000468653 F2Z2F3 143 aa14.06□□□□□ -0.16
SMC4-209ENST00000468653 SLAQ13239 276 aa14.06□□□□□ -0.16
SMC4-209ENST00000468653 ODF3L2Q3SX64 289 aa14.06□□□□□ -0.16
SMC4-209ENST00000468653 ANXA2RQ3ZCQ2 193 aa14.06□□□□□ -0.16
SMC4-209ENST00000468653 AMTNQ6UX39 209 aa14.06□□□□□ -0.16
SMC4-209ENST00000468653 TRAV12-2A0A075B6T6 113 aa14.05□□□□□ -0.16
SMC4-209ENST00000468653 OR11H12B2RN74 326 aa14.05□□□□□ -0.16
SMC4-209ENST00000468653 CMC4P56277 68 aaPredicted RBP14.05□□□□□ -0.16
SMC4-209ENST00000468653 GFI1BQ5VTD9 330 aa14.05□□□□□ -0.16
SMC4-209ENST00000468653 A8MTW9 85 aa14.04□□□□□ -0.16
SMC4-209ENST00000468653 TWIST1Q15672 202 aa14.04□□□□□ -0.16
SMC4-209ENST00000468653 KRTAP24-1Q3LI83 254 aa14.04□□□□□ -0.16
SMC4-209ENST00000468653 PRR31Q5SQ13 230 aa14.04□□□□□ -0.16
SMC4-209ENST00000468653 FAM159AQ6UWV7 190 aa14.04□□□□□ -0.16
SMC4-209ENST00000468653 NTF3P20783 257 aa14.03□□□□□ -0.16
SMC4-209ENST00000468653 S100A4P26447 101 aaKnown RBP14.03□□□□□ -0.16
SMC4-209ENST00000468653 FXYD7P58549 80 aa14.03□□□□□ -0.16
SMC4-209ENST00000468653 TEP1Q99973 2627 aaKnown RBP14.03□□□□□ -0.16
SMC4-209ENST00000468653 UBE2CO00762 179 aa14.02□□□□□ -0.16
SMC4-209ENST00000468653 ZNF324O75467 553 aaPredicted RBP14.02□□□□□ -0.16
SMC4-209ENST00000468653 HOXA5P20719 270 aa14.02□□□□□ -0.16
SMC4-209ENST00000468653 ASIPP42127 132 aa14.02□□□□□ -0.16
SMC4-209ENST00000468653 H3BVH4 76 aa14.01□□□□□ -0.17
SMC4-209ENST00000468653 KCNS1Q96KK3 526 aa14.01□□□□□ -0.17
SMC4-209ENST00000468653 CNFNQ9BYD5 112 aa14.01□□□□□ -0.17
SMC4-209ENST00000468653 TIMM8BQ9Y5J9 83 aaPredicted RBP14.01□□□□□ -0.17
SMC4-209ENST00000468653 RBMY1BA6NDE4 496 aaKnown RBP14.01□□□□□ -0.17
SMC4-209ENST00000468653 RBMY1EA6NEQ0 496 aaKnown RBP14.01□□□□□ -0.17
SMC4-209ENST00000468653 GNRH2O43555 120 aa14.01□□□□□ -0.17
SMC4-209ENST00000468653 OR5AL1P0C617 328 aa14.01□□□□□ -0.17
SMC4-209ENST00000468653 RBMY1DP0C7P1 496 aaKnown RBP14.01□□□□□ -0.17
SMC4-209ENST00000468653 SRIP30626 198 aa14.01□□□□□ -0.17
SMC4-209ENST00000468653 STHQ8IWL8 128 aa14.01□□□□□ -0.17
SMC4-209ENST00000468653 GATD1Q8NB37 220 aa14.01□□□□□ -0.17
SMC4-209ENST00000468653 BEAN1Q3B7T3 259 aa14□□□□□ -0.17
SMC4-209ENST00000468653 ATRQ13535 2644 aa13.99□□□□□ -0.17
SMC4-209ENST00000468653 SNAI2O43623 268 aa13.99□□□□□ -0.17
SMC4-209ENST00000468653 INSL3P51460 131 aa13.99□□□□□ -0.17
SMC4-209ENST00000468653 COA6Q5JTJ3 125 aaKnown RBP13.99□□□□□ -0.17
SMC4-209ENST00000468653 C9orf66Q5T8R8 295 aa13.99□□□□□ -0.17
SMC4-209ENST00000468653 ZNF493Q6ZR52 646 aa13.99□□□□□ -0.17
SMC4-209ENST00000468653 OR10AG1Q8NH19 301 aa13.99□□□□□ -0.17
SMC4-209ENST00000468653 CLUHP3Q96NS8 147 aa13.99□□□□□ -0.17
SMC4-209ENST00000468653 CD7P09564 240 aa13.99□□□□□ -0.17
SMC4-209ENST00000468653 CACNG7P62955 275 aa13.99□□□□□ -0.17
SMC4-209ENST00000468653 SPANXN1Q5VSR9 72 aa13.99□□□□□ -0.17
SMC4-209ENST00000468653 MSRB1Q9NZV6 116 aa13.99□□□□□ -0.17
SMC4-209ENST00000468653 LOC102724200A0A096LPH7 203 aaPredicted RBP13.98□□□□□ -0.17
SMC4-209ENST00000468653 PDZD11Q5EBL8 140 aa13.98□□□□□ -0.17
SMC4-209ENST00000468653 FAM110AQ9BQ89 295 aa13.98□□□□□ -0.17
SMC4-209ENST00000468653 MED14OSP0DP75 135 aa13.97□□□□□ -0.17
SMC4-209ENST00000468653 TDRG1Q3Y452 100 aa13.97□□□□□ -0.17
SMC4-209ENST00000468653 DNLZQ5SXM8 178 aa13.97□□□□□ -0.17
SMC4-209ENST00000468653 PRIMA1Q86XR5 153 aa13.97□□□□□ -0.17
SMC4-209ENST00000468653 BAGE3Q86Y29 109 aa13.97□□□□□ -0.17
SMC4-209ENST00000468653 ALKBH7Q9BT30 221 aaPredicted RBP13.97□□□□□ -0.17
SMC4-209ENST00000468653 IGHV1OR15-1A0A075B7D0 117 aa13.96□□□□□ -0.17
SMC4-209ENST00000468653 CRXO43186 299 aaPredicted RBP13.96□□□□□ -0.17
SMC4-209ENST00000468653 AKR1D1P51857 326 aa13.96□□□□□ -0.17
SMC4-209ENST00000468653 Q0VG73 95 aa13.96□□□□□ -0.17
SMC4-209ENST00000468653 OR10J3Q5JRS4 329 aa13.96□□□□□ -0.17
SMC4-209ENST00000468653 HIST3H2BBQ8N257 126 aa13.96□□□□□ -0.17
SMC4-209ENST00000468653 SPATA3Q8NHX4 192 aa13.96□□□□□ -0.17
SMC4-209ENST00000468653 PHLDA3Q9Y5J5 127 aa13.96□□□□□ -0.17
SMC4-209ENST00000468653 TENM1Q9UKZ4 2725 aa13.96□□□□□ -0.17
SMC4-209ENST00000468653 S100A2P29034 98 aa13.96□□□□□ -0.18
SMC4-209ENST00000468653 FAM104BQ5XKR9 115 aa13.96□□□□□ -0.18
SMC4-209ENST00000468653 TRPT1Q86TN4 253 aaKnown RBP13.96□□□□□ -0.18
SMC4-209ENST00000468653 ZNF747Q9BV97 191 aa13.96□□□□□ -0.18
SMC4-209ENST00000468653 TMEM191AQ9H0A3 160 aa13.96□□□□□ -0.18
SMC4-209ENST00000468653 IGHV4-4A0A075B6R2 117 aa13.95□□□□□ -0.18
SMC4-209ENST00000468653 RNASE3P12724 160 aaKnown RBP13.95□□□□□ -0.18
SMC4-209ENST00000468653 SMIM15Q7Z3B0 74 aa13.95□□□□□ -0.18
SMC4-209ENST00000468653 AMN1Q8IY45 258 aa13.95□□□□□ -0.18
SMC4-209ENST00000468653 AMBPP02760 352 aa13.94□□□□□ -0.18
SMC4-209ENST00000468653 NUTF2P61970 127 aaKnown RBP13.94□□□□□ -0.18
SMC4-209ENST00000468653 TMEM256Q8N2U0 113 aa13.94□□□□□ -0.18
SMC4-209ENST00000468653 C3orf56Q8N813 242 aa13.94□□□□□ -0.18
SMC4-209ENST00000468653 MCRIP2Q9BUT9 160 aaKnown RBP13.94□□□□□ -0.18
SMC4-209ENST00000468653 SCRT2Q9NQ03 307 aa13.94□□□□□ -0.18
SMC4-209ENST00000468653 C19orf73Q9NVV2 129 aa13.94□□□□□ -0.18
SMC4-209ENST00000468653 TP53TG3Q9ULZ0 132 aa13.94□□□□□ -0.18
SMC4-209ENST00000468653 M0R381 172 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms