RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 AKR1D1P51857 326 aa1.03□□□□□ -2.24
VPS13A-209ENST00000467124 LINC00575Q6W349 94 aa1.03□□□□□ -2.24
VPS13A-209ENST00000467124 HLA-DRB4X5D2U9 266 aa1.03□□□□□ -2.24
VPS13A-209ENST00000467124 PNMA8CA0A1B0GUJ8 204 aa1.02□□□□□ -2.25
VPS13A-209ENST00000467124 TPST1O60507 370 aa1.02□□□□□ -2.25
VPS13A-209ENST00000467124 IGHV3-30P01768 117 aa1.02□□□□□ -2.25
VPS13A-209ENST00000467124 GYPBP06028 91 aa1.02□□□□□ -2.25
VPS13A-209ENST00000467124 IGHV3-30-5P0DP03 117 aa1.02□□□□□ -2.25
VPS13A-209ENST00000467124 SPTBP11277 2137 aa1.02□□□□□ -2.25
VPS13A-209ENST00000467124 MYH1P12882 1939 aa1.02□□□□□ -2.25
VPS13A-209ENST00000467124 LAMA4Q16363 1823 aa1.02□□□□□ -2.25
VPS13A-209ENST00000467124 ARHGAP31Q2M1Z3 1444 aa1.02□□□□□ -2.25
VPS13A-209ENST00000467124 UNQ5815/PRO19632Q6UWF5 114 aa1.02□□□□□ -2.25
VPS13A-209ENST00000467124 SNX29P2Q8IUI4 249 aa1.02□□□□□ -2.25
VPS13A-209ENST00000467124 OR4S1Q8NGB4 309 aa1.02□□□□□ -2.25
VPS13A-209ENST00000467124 SPANXCQ9NY87 97 aa1.02□□□□□ -2.25
VPS13A-209ENST00000467124 RHOHQ15669 191 aa1.01□□□□□ -2.25
VPS13A-209ENST00000467124 CCSMST1Q4G0I0 132 aa1.01□□□□□ -2.25
VPS13A-209ENST00000467124 MORN2Q502X0 79 aa1.01□□□□□ -2.25
VPS13A-209ENST00000467124 TSTD1Q8NFU3 115 aa1.01□□□□□ -2.25
VPS13A-209ENST00000467124 LINC00208Q96KT6 92 aa1.01□□□□□ -2.25
VPS13A-209ENST00000467124 LSM2Q9Y333 95 aaKnown RBP1.01□□□□□ -2.25
VPS13A-209ENST00000467124 KIAA1549LQ6ZVL6 1849 aa1.01□□□□□ -2.25
VPS13A-209ENST00000467124 CTTNBP2Q8WZ74 1663 aa1□□□□□ -2.25
VPS13A-209ENST00000467124 A0A0G2JMM0 328 aa1□□□□□ -2.25
VPS13A-209ENST00000467124 FAM236AA0A1B0GUQ0 79 aa1□□□□□ -2.25
VPS13A-209ENST00000467124 FAM236BA0A1B0GV22 79 aa1□□□□□ -2.25
VPS13A-209ENST00000467124 A0A1W2PPM0 123 aa1□□□□□ -2.25
VPS13A-209ENST00000467124 POLR2JP52435 117 aaKnown RBP1□□□□□ -2.25
VPS13A-209ENST00000467124 IGF2P01344 180 aa0.99□□□□□ -2.25
VPS13A-209ENST00000467124 PLGLB1Q02325 96 aa0.99□□□□□ -2.25
VPS13A-209ENST00000467124 ZNF56Q15929 161 aa0.99□□□□□ -2.25
VPS13A-209ENST00000467124 MAGOHBQ96A72 148 aaKnown RBP0.99□□□□□ -2.25
VPS13A-209ENST00000467124 NOP16Q9Y3C1 178 aaKnown RBP0.99□□□□□ -2.25
VPS13A-209ENST00000467124 NINQ8N4C6 2090 aa0.99□□□□□ -2.25
VPS13A-209ENST00000467124 ZDBF2Q9HCK1 2354 aa0.99□□□□□ -2.25
VPS13A-209ENST00000467124 HELZP42694 1942 aaKnown RBP0.99□□□□□ -2.25
VPS13A-209ENST00000467124 FHAD1B1AJZ9 1412 aa0.98□□□□□ -2.25
VPS13A-209ENST00000467124 LRP5O75197 1615 aa0.98□□□□□ -2.25
VPS13A-209ENST00000467124 M0R2Z0 102 aa0.98□□□□□ -2.25
VPS13A-209ENST00000467124 FXYD1O00168 92 aa0.98□□□□□ -2.25
VPS13A-209ENST00000467124 IGLC6P0CF74 106 aa0.98□□□□□ -2.25
VPS13A-209ENST00000467124 LINC00694P0DN24 101 aa0.98□□□□□ -2.25
VPS13A-209ENST00000467124 SPINT3P49223 89 aa0.98□□□□□ -2.25
VPS13A-209ENST00000467124 SMCO1Q147U7 214 aa0.98□□□□□ -2.25
VPS13A-209ENST00000467124 FXYD3Q14802 87 aa0.98□□□□□ -2.25
VPS13A-209ENST00000467124 SMIM21Q3B7S5 101 aa0.98□□□□□ -2.25
VPS13A-209ENST00000467124 GLYATL3Q5SZD4 288 aa0.98□□□□□ -2.25
VPS13A-209ENST00000467124 XAF1Q6GPH4 301 aa0.98□□□□□ -2.25
VPS13A-209ENST00000467124 SLC25A26Q70HW3 274 aa0.98□□□□□ -2.25
VPS13A-209ENST00000467124 ATG5Q9H1Y0 275 aa0.98□□□□□ -2.25
VPS13A-209ENST00000467124 FCGBPQ9Y6R7 5405 aaPredicted RBP0.98□□□□□ -2.25
VPS13A-209ENST00000467124 AHNAKQ09666 5890 aaKnown RBP0.97□□□□□ -2.25
VPS13A-209ENST00000467124 NBDYA0A0U1RRE5 68 aa0.97□□□□□ -2.25
VPS13A-209ENST00000467124 K7ERU9 68 aa0.97□□□□□ -2.25
VPS13A-209ENST00000467124 RBP4P02753 201 aa0.97□□□□□ -2.25
VPS13A-209ENST00000467124 CCKP06307 115 aa0.97□□□□□ -2.25
VPS13A-209ENST00000467124 NCS1P62166 190 aa0.97□□□□□ -2.25
VPS13A-209ENST00000467124 ASB16-AS1Q495Z4 193 aa0.97□□□□□ -2.25
VPS13A-209ENST00000467124 PLAC4Q8WY50 150 aa0.97□□□□□ -2.25
VPS13A-209ENST00000467124 MUC5BQ9HC84 5762 aaPredicted RBP0.96□□□□□ -2.26
VPS13A-209ENST00000467124 LY6G6CO95867 125 aa0.96□□□□□ -2.26
VPS13A-209ENST00000467124 CAV3P56539 151 aa0.96□□□□□ -2.26
VPS13A-209ENST00000467124 Q6ZS92 163 aa0.96□□□□□ -2.26
VPS13A-209ENST00000467124 C5orf56Q8N8D9 126 aa0.96□□□□□ -2.26
VPS13A-209ENST00000467124 DMAC1Q96GE9 116 aa0.96□□□□□ -2.26
VPS13A-209ENST00000467124 MRPL35Q9NZE8 188 aaKnown RBP0.96□□□□□ -2.26
VPS13A-209ENST00000467124 COPZ2Q9P299 210 aa0.96□□□□□ -2.26
VPS13A-209ENST00000467124 ZCCHC6Q5VYS8 1495 aaKnown RBP0.95□□□□□ -2.26
VPS13A-209ENST00000467124 HIGD1CA8MV81 97 aa0.95□□□□□ -2.26
VPS13A-209ENST00000467124 J3QR89 54 aa0.95□□□□□ -2.26
VPS13A-209ENST00000467124 MPC1LP0DKB6 136 aa0.95□□□□□ -2.26
VPS13A-209ENST00000467124 COX4I1P13073 169 aa0.95□□□□□ -2.26
VPS13A-209ENST00000467124 EVI2AP22794 236 aa0.95□□□□□ -2.26
VPS13A-209ENST00000467124 MMGT1Q8N4V1 131 aa0.95□□□□□ -2.26
VPS13A-209ENST00000467124 FAM107BQ9H098 131 aa0.95□□□□□ -2.26
VPS13A-209ENST00000467124 ERCC6Q03468 1493 aa0.94□□□□□ -2.26
VPS13A-209ENST00000467124 KIDINS220Q9ULH0 1771 aa0.94□□□□□ -2.26
VPS13A-209ENST00000467124 SLC25A6P12236 298 aa0.94□□□□□ -2.26
VPS13A-209ENST00000467124 C6orf52Q5T4I8 152 aa0.94□□□□□ -2.26
VPS13A-209ENST00000467124 MIC13Q5XKP0 118 aa0.94□□□□□ -2.26
VPS13A-209ENST00000467124 CTAGE3PQ8IX95 158 aa0.94□□□□□ -2.26
VPS13A-209ENST00000467124 ATP6V0E2Q8NHE4 81 aa0.94□□□□□ -2.26
VPS13A-209ENST00000467124 TAS2R8Q9NYW2 309 aa0.94□□□□□ -2.26
VPS13A-209ENST00000467124 PTPRGP23470 1445 aa0.94□□□□□ -2.26
VPS13A-209ENST00000467124 DYNLRB2Q8TF09 96 aa0.93□□□□□ -2.26
VPS13A-209ENST00000467124 CPDO75976 1380 aa0.93□□□□□ -2.26
VPS13A-209ENST00000467124 WDR97A6NE52 1622 aa0.93□□□□□ -2.26
VPS13A-209ENST00000467124 TRBV10-1A0A0K0K1A3 114 aa0.92□□□□□ -2.26
VPS13A-209ENST00000467124 J3QLW9 94 aa0.92□□□□□ -2.26
VPS13A-209ENST00000467124 K7EIL1 84 aa0.92□□□□□ -2.26
VPS13A-209ENST00000467124 TPT1P8Q9HAU6 139 aa0.92□□□□□ -2.26
VPS13A-209ENST00000467124 CDK5RAP2Q96SN8 1893 aa0.92□□□□□ -2.26
VPS13A-209ENST00000467124 CEP152O94986 1710 aa0.92□□□□□ -2.26
VPS13A-209ENST00000467124 CDK12Q9NYV4 1490 aaPredicted RBP0.92□□□□□ -2.26
VPS13A-209ENST00000467124 OVOS2A0A0J9YW53 1432 aa0.91□□□□□ -2.26
VPS13A-209ENST00000467124 OVOS2Q6IE36 1432 aa0.91□□□□□ -2.26
VPS13A-209ENST00000467124 TRBV20-1A0A075B6N2 111 aa0.91□□□□□ -2.26
VPS13A-209ENST00000467124 CXorf51AA0A1B0GTR3 108 aa0.91□□□□□ -2.26
VPS13A-209ENST00000467124 ZNF137PP52743 207 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms