RNA–Protein interactions for RNA: ENST00000466391.1

LSG1-206, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 791 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-206ENST00000466391 TRAV8-2A0A0B4J237 113 aa6.25□□□□□ -1.41
LSG1-206ENST00000466391 TMEM89A2RUT3 159 aa6.25□□□□□ -1.41
LSG1-206ENST00000466391 FABP5P3A8MUU1 101 aa6.25□□□□□ -1.41
LSG1-206ENST00000466391 J3QLI3 93 aa6.25□□□□□ -1.41
LSG1-206ENST00000466391 M0R143 59 aa6.25□□□□□ -1.41
LSG1-206ENST00000466391 PRSS2P07478 247 aa6.25□□□□□ -1.41
LSG1-206ENST00000466391 IGHV4-38-2P0DP08 117 aa6.25□□□□□ -1.41
LSG1-206ENST00000466391 NTF3P20783 257 aa6.25□□□□□ -1.41
LSG1-206ENST00000466391 HIST1H1AQ02539 215 aaPredicted RBP6.25□□□□□ -1.41
LSG1-206ENST00000466391 FAM104BQ5XKR9 115 aa6.25□□□□□ -1.41
LSG1-206ENST00000466391 EBLN2Q6P2I7 272 aa6.25□□□□□ -1.41
LSG1-206ENST00000466391 FAM19A2Q8N3H0 131 aa6.25□□□□□ -1.41
LSG1-206ENST00000466391 KLHDC1Q8N7A1 406 aa6.25□□□□□ -1.41
LSG1-206ENST00000466391 ASCL2Q99929 193 aa6.25□□□□□ -1.41
LSG1-206ENST00000466391 VGLL1Q99990 258 aa6.25□□□□□ -1.41
LSG1-206ENST00000466391 TMEM70Q9BUB7 260 aa6.25□□□□□ -1.41
LSG1-206ENST00000466391 ZMAT5Q9UDW3 170 aaKnown RBP6.25□□□□□ -1.41
LSG1-206ENST00000466391 IGHV1-24A0A0C4DH33 117 aa6.24□□□□□ -1.41
LSG1-206ENST00000466391 TRBV7-9A0A0J9YWB2 115 aa6.24□□□□□ -1.41
LSG1-206ENST00000466391 TRGV3P03979 118 aa6.24□□□□□ -1.41
LSG1-206ENST00000466391 ARL3P36405 182 aa6.24□□□□□ -1.41
LSG1-206ENST00000466391 TDRG1Q3Y452 100 aa6.24□□□□□ -1.41
LSG1-206ENST00000466391 LYZL1Q6UWQ5 148 aa6.24□□□□□ -1.41
LSG1-206ENST00000466391 PET117Q6UWS5 81 aa6.24□□□□□ -1.41
LSG1-206ENST00000466391 SPATA12Q7Z6I5 190 aa6.24□□□□□ -1.41
LSG1-206ENST00000466391 TMEM219Q86XT9 240 aa6.24□□□□□ -1.41
LSG1-206ENST00000466391 FER1L6-AS1Q8NA97 138 aa6.24□□□□□ -1.41
LSG1-206ENST00000466391 TMEM191AQ9H0A3 160 aa6.24□□□□□ -1.41
LSG1-206ENST00000466391 UQCR10Q9UDW1 63 aa6.24□□□□□ -1.41
LSG1-206ENST00000466391 LAMTOR2Q9Y2Q5 125 aa6.24□□□□□ -1.41
LSG1-206ENST00000466391 AKAP6Q13023 2319 aa6.24□□□□□ -1.41
LSG1-206ENST00000466391 IGKV2D-30A0A075B6S6 120 aa6.23□□□□□ -1.41
LSG1-206ENST00000466391 TRAV9-2A0A087WT02 112 aa6.23□□□□□ -1.41
LSG1-206ENST00000466391 A0A0G2JLM5 398 aa6.23□□□□□ -1.41
LSG1-206ENST00000466391 LINC01546A6NGU7 62 aa6.23□□□□□ -1.41
LSG1-206ENST00000466391 H3BUX3 64 aa6.23□□□□□ -1.41
LSG1-206ENST00000466391 SOCS3O14543 225 aa6.23□□□□□ -1.41
LSG1-206ENST00000466391 PPBPP02775 128 aa6.23□□□□□ -1.41
LSG1-206ENST00000466391 IGLC3P0DOY3 106 aa6.23□□□□□ -1.41
LSG1-206ENST00000466391 HLA-DMBP28068 263 aa6.23□□□□□ -1.41
LSG1-206ENST00000466391 ZNF80P51504 273 aaPredicted RBP6.23□□□□□ -1.41
LSG1-206ENST00000466391 ZNF138P52744 262 aa6.23□□□□□ -1.41
LSG1-206ENST00000466391 SPATA45Q537H7 98 aa6.23□□□□□ -1.41
LSG1-206ENST00000466391 SAMD13Q5VXD3 122 aa6.23□□□□□ -1.41
LSG1-206ENST00000466391 BRD3OSQ6XYD6 125 aa6.23□□□□□ -1.41
LSG1-206ENST00000466391 SNHG12Q9BXW3 62 aa6.23□□□□□ -1.41
LSG1-206ENST00000466391 HSPB8Q9UJY1 196 aa6.23□□□□□ -1.41
LSG1-206ENST00000466391 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.23□□□□□ -1.413e-15■■■■■ 56.9
LSG1-206ENST00000466391 COL12A1Q99715 3063 aa6.22□□□□□ -1.41
LSG1-206ENST00000466391 DCHS2Q6V1P9 2916 aa6.22□□□□□ -1.41
LSG1-206ENST00000466391 IGHV4-4A0A075B6R2 117 aa6.22□□□□□ -1.41
LSG1-206ENST00000466391 IGHV3OR16-10A0A075B7F0 116 aa6.22□□□□□ -1.41
LSG1-206ENST00000466391 IGHV3-35A0A0C4DH35 117 aa6.22□□□□□ -1.41
LSG1-206ENST00000466391 PRAC2D3DTV9 90 aa6.22□□□□□ -1.41
LSG1-206ENST00000466391 SYS1-DBNDD2H3BUS1 97 aa6.22□□□□□ -1.41
LSG1-206ENST00000466391 K7EMT4 169 aa6.22□□□□□ -1.41
LSG1-206ENST00000466391 LEPROTL1O95214 131 aa6.22□□□□□ -1.41
LSG1-206ENST00000466391 RNF224P0DH78 156 aa6.22□□□□□ -1.41
LSG1-206ENST00000466391 SSTP61278 116 aa6.22□□□□□ -1.41
LSG1-206ENST00000466391 TMEM78Q5T7P6 136 aa6.22□□□□□ -1.41
LSG1-206ENST00000466391 APRG1Q8IVJ8 170 aa6.22□□□□□ -1.41
LSG1-206ENST00000466391 ORMDL3Q8N138 153 aa6.22□□□□□ -1.41
LSG1-206ENST00000466391 DEFB125Q8N687 156 aa6.22□□□□□ -1.41
LSG1-206ENST00000466391 Q8TAT8 98 aa6.22□□□□□ -1.41
LSG1-206ENST00000466391 LINC00477Q96M19 166 aa6.22□□□□□ -1.41
LSG1-206ENST00000466391 AGPAT4-IT1Q9H0P7 198 aa6.22□□□□□ -1.41
LSG1-206ENST00000466391 TEX15Q9BXT5 2789 aa6.21□□□□□ -1.42
LSG1-206ENST00000466391 TMEM213A2RRL7 107 aa6.21□□□□□ -1.42
LSG1-206ENST00000466391 USP17L23D6RBM5 183 aa6.21□□□□□ -1.42
LSG1-206ENST00000466391 OVOL1O14753 267 aa6.21□□□□□ -1.42
LSG1-206ENST00000466391 SNAI2O43623 268 aa6.21□□□□□ -1.42
LSG1-206ENST00000466391 NUTF2P61970 127 aaKnown RBP6.21□□□□□ -1.42
LSG1-206ENST00000466391 LOXL1Q08397 574 aaPredicted RBP6.21□□□□□ -1.42
LSG1-206ENST00000466391 MRPL51Q4U2R6 128 aaKnown RBP6.21□□□□□ -1.42
LSG1-206ENST00000466391 LINC01545Q5VT33 79 aa6.21□□□□□ -1.42
LSG1-206ENST00000466391 FA2HQ7L5A8 372 aa6.21□□□□□ -1.42
LSG1-206ENST00000466391 GPHB5Q86YW7 130 aa6.21□□□□□ -1.42
LSG1-206ENST00000466391 LRRC75A-AS1Q8N1F1 130 aa6.21□□□□□ -1.42
LSG1-206ENST00000466391 LINC00469Q8N7U9 141 aa6.21□□□□□ -1.42
LSG1-206ENST00000466391 OR10AG1Q8NH19 301 aa6.21□□□□□ -1.42
LSG1-206ENST00000466391 PRELID3AQ96N28 172 aa6.21□□□□□ -1.42
LSG1-206ENST00000466391 ST20Q9HBF5 79 aa6.21□□□□□ -1.42
LSG1-206ENST00000466391 MRPS16Q9Y3D3 137 aaKnown RBP6.21□□□□□ -1.42
LSG1-206ENST00000466391 DOPEY2Q9Y3R5 2298 aa6.21□□□□□ -1.42
LSG1-206ENST00000466391 IGHV3OR16-8A0A075B7F1 116 aa6.2□□□□□ -1.42
LSG1-206ENST00000466391 IGKV3D-20A0A0C4DH25 116 aa6.2□□□□□ -1.42
LSG1-206ENST00000466391 A0A1B0GV90 55 aa6.2□□□□□ -1.42
LSG1-206ENST00000466391 PRSS47A8MTI9 375 aa6.2□□□□□ -1.42
LSG1-206ENST00000466391 D6R8Y8 96 aa6.2□□□□□ -1.42
LSG1-206ENST00000466391 COX6B1P14854 86 aa6.2□□□□□ -1.42
LSG1-206ENST00000466391 CACNG7P62955 275 aa6.2□□□□□ -1.42
LSG1-206ENST00000466391 ERCC8Q13216 396 aa6.2□□□□□ -1.42
LSG1-206ENST00000466391 HIST2H2BCQ6DN03 193 aa6.2□□□□□ -1.42
LSG1-206ENST00000466391 HIST2H2BDQ6DRA6 164 aa6.2□□□□□ -1.42
LSG1-206ENST00000466391 ZNF705AQ6ZN79 300 aaPredicted RBP6.2□□□□□ -1.42
LSG1-206ENST00000466391 IL17RELQ6ZVW7 336 aa6.2□□□□□ -1.42
LSG1-206ENST00000466391 AMN1Q8IY45 258 aa6.2□□□□□ -1.42
LSG1-206ENST00000466391 RNF182Q8N6D2 247 aa6.2□□□□□ -1.42
LSG1-206ENST00000466391 RNF185Q96GF1 192 aa6.2□□□□□ -1.42
LSG1-206ENST00000466391 FAM19A4Q96LR4 140 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms