RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 ABHD14BQ96IU4 210 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 GABARAPL3Q9BY60 117 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 CXCL16Q9H2A7 254 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 ZNF492Q9P255 531 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 F11RQ9Y624 299 aaKnown RBP2.35□□□□□ -2.03
SNX4-202ENST00000465505 LY96Q9Y6Y9 160 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 ZNF236Q9UL36 1845 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 NHSQ6T4R5 1651 aa2.34□□□□□ -2.03
SNX4-202ENST00000465505 EML5Q05BV3 1969 aa2.34□□□□□ -2.03
SNX4-202ENST00000465505 IGHV3OR16-12A0A075B7B8 117 aa2.34□□□□□ -2.03
SNX4-202ENST00000465505 IGHV3OR16-13A0A075B7E8 117 aa2.34□□□□□ -2.03
SNX4-202ENST00000465505 C2orf70A6NJV1 201 aa2.34□□□□□ -2.03
SNX4-202ENST00000465505 A6NN06 94 aa2.34□□□□□ -2.03
SNX4-202ENST00000465505 F2Z2F3 143 aa2.34□□□□□ -2.03
SNX4-202ENST00000465505 DNAH10OSP0CZ25 163 aa2.34□□□□□ -2.03
SNX4-202ENST00000465505 AQP1P29972 269 aa2.34□□□□□ -2.03
SNX4-202ENST00000465505 FAUP35544 74 aaKnown RBP2.34□□□□□ -2.03
SNX4-202ENST00000465505 KRTDAPP60985 99 aa2.34□□□□□ -2.03
SNX4-202ENST00000465505 FGF12P61328 243 aa2.34□□□□□ -2.03
SNX4-202ENST00000465505 UBE2G1P62253 170 aa2.34□□□□□ -2.03
SNX4-202ENST00000465505 CYCSP99999 105 aaKnown RBP2.34□□□□□ -2.03
SNX4-202ENST00000465505 IL17AQ16552 155 aa2.34□□□□□ -2.03
SNX4-202ENST00000465505 ASB16-AS1Q495Z4 193 aa2.34□□□□□ -2.03
SNX4-202ENST00000465505 LINC01554Q52M75 96 aa2.34□□□□□ -2.03
SNX4-202ENST00000465505 CYP2G1PQ6ZSU1 146 aa2.34□□□□□ -2.03
SNX4-202ENST00000465505 HMGN2P46Q86SG4 172 aa2.34□□□□□ -2.03
SNX4-202ENST00000465505 LINC00612Q8N6U2 182 aa2.34□□□□□ -2.03
SNX4-202ENST00000465505 FLVCR1-AS1Q8TAF5 88 aa2.34□□□□□ -2.03
SNX4-202ENST00000465505 FAM104AQ969W3 186 aa2.34□□□□□ -2.03
SNX4-202ENST00000465505 CLEC7AQ9BXN2 247 aa2.34□□□□□ -2.03
SNX4-202ENST00000465505 CST11Q9H112 138 aa2.34□□□□□ -2.03
SNX4-202ENST00000465505 CYSTM1Q9H1C7 97 aa2.34□□□□□ -2.03
SNX4-202ENST00000465505 UBR3Q6ZT12 1888 aa2.34□□□□□ -2.03
SNX4-202ENST00000465505 MYO16Q9Y6X6 1858 aa2.34□□□□□ -2.03
SNX4-202ENST00000465505 KIAA0100Q14667 2235 aaKnown RBP2.34□□□□□ -2.04
SNX4-202ENST00000465505 COL4A6Q14031 1691 aa2.34□□□□□ -2.04
SNX4-202ENST00000465505 MDC1Q14676 2089 aaKnown RBP2.33□□□□□ -2.04
SNX4-202ENST00000465505 CD163L1Q9NR16 1453 aa2.33□□□□□ -2.04
SNX4-202ENST00000465505 ATRXP46100 2492 aa2.33□□□□□ -2.04
SNX4-202ENST00000465505 TRAV2A0A0B4J234 112 aa2.33□□□□□ -2.04
SNX4-202ENST00000465505 IGHV3-20A0A0C4DH32 117 aa2.33□□□□□ -2.04
SNX4-202ENST00000465505 IGHV1-24A0A0C4DH33 117 aa2.33□□□□□ -2.04
SNX4-202ENST00000465505 A8MU10 97 aa2.33□□□□□ -2.04
SNX4-202ENST00000465505 C9JCJ5 164 aa2.33□□□□□ -2.04
SNX4-202ENST00000465505 COX7A2P2O60397 106 aa2.33□□□□□ -2.04
SNX4-202ENST00000465505 SLC25A14O95258 325 aaPredicted RBP2.33□□□□□ -2.04
SNX4-202ENST00000465505 ELK1P19419 428 aa2.33□□□□□ -2.04
SNX4-202ENST00000465505 NCBP2P52298 156 aaKnown RBP eCLIP2.33□□□□□ -2.04
SNX4-202ENST00000465505 EFNA4P52798 201 aa2.33□□□□□ -2.04
SNX4-202ENST00000465505 DSCR4P56555 118 aaPredicted RBP2.33□□□□□ -2.04
SNX4-202ENST00000465505 SSBP1Q04837 148 aaKnown RBP2.33□□□□□ -2.04
SNX4-202ENST00000465505 ADIGQ0VDE8 80 aa2.33□□□□□ -2.04
SNX4-202ENST00000465505 C1orf100Q5SVJ3 147 aa2.33□□□□□ -2.04
SNX4-202ENST00000465505 ZFP2Q6ZN57 461 aa2.33□□□□□ -2.04
SNX4-202ENST00000465505 MARCH3Q86UD3 253 aa2.33□□□□□ -2.04
SNX4-202ENST00000465505 NMES1Q9C002 83 aa2.33□□□□□ -2.04
SNX4-202ENST00000465505 TRAPPC1Q9Y5R8 145 aa2.33□□□□□ -2.04
SNX4-202ENST00000465505 SCN7AQ01118 1682 aa2.33□□□□□ -2.04
SNX4-202ENST00000465505 A0A0G2JMZ2 1700 aa2.33□□□□□ -2.04
SNX4-202ENST00000465505 LRRC37A2A6NM11 1700 aa2.33□□□□□ -2.04
SNX4-202ENST00000465505 LRRC37AA6NMS7 1700 aa2.33□□□□□ -2.04
SNX4-202ENST00000465505 TNS1Q9HBL0 1735 aaKnown RBP2.33□□□□□ -2.04
SNX4-202ENST00000465505 DLEC1Q9Y238 1755 aa2.33□□□□□ -2.04
SNX4-202ENST00000465505 DIDO1Q9BTC0 2240 aaKnown RBP2.33□□□□□ -2.04
SNX4-202ENST00000465505 SHROOM3Q8TF72 1996 aa2.32□□□□□ -2.04
SNX4-202ENST00000465505 IGLV3-10A0A075B6K4 115 aa2.32□□□□□ -2.04
SNX4-202ENST00000465505 TRGV8A0A0C4DH27 118 aa2.32□□□□□ -2.04
SNX4-202ENST00000465505 NDUFC1O43677 76 aa2.32□□□□□ -2.04
SNX4-202ENST00000465505 TIMM17BO60830 172 aa2.32□□□□□ -2.04
SNX4-202ENST00000465505 CPSF4O95639 269 aaKnown RBP2.32□□□□□ -2.04
SNX4-202ENST00000465505 CCKP06307 115 aa2.32□□□□□ -2.04
SNX4-202ENST00000465505 SCGB1C2P0DMR2 95 aa2.32□□□□□ -2.04
SNX4-202ENST00000465505 IGHV3-43DP0DP04 118 aa2.32□□□□□ -2.04
SNX4-202ENST00000465505 UBE2D3P61077 147 aa2.32□□□□□ -2.04
SNX4-202ENST00000465505 UBE2D2P62837 147 aa2.32□□□□□ -2.04
SNX4-202ENST00000465505 SS18Q15532 418 aa2.32□□□□□ -2.04
SNX4-202ENST00000465505 CCL14Q16627 93 aa2.32□□□□□ -2.04
SNX4-202ENST00000465505 Q1T7F1 81 aa2.32□□□□□ -2.04
SNX4-202ENST00000465505 TMEM170BQ5T4T1 132 aa2.32□□□□□ -2.04
SNX4-202ENST00000465505 GUSBP11Q6P575 273 aa2.32□□□□□ -2.04
SNX4-202ENST00000465505 ATP11AUNQ6ZP68 121 aa2.32□□□□□ -2.04
SNX4-202ENST00000465505 LINC00643Q86TS7 51 aa2.32□□□□□ -2.04
SNX4-202ENST00000465505 Q8N377 158 aa2.32□□□□□ -2.04
SNX4-202ENST00000465505 ZNF645Q8N7E2 425 aa2.32□□□□□ -2.04
SNX4-202ENST00000465505 CCL4L1Q8NHW4 92 aa2.32□□□□□ -2.04
SNX4-202ENST00000465505 PPP1R1CQ8WVI7 109 aa2.32□□□□□ -2.04
SNX4-202ENST00000465505 RNASE6Q93091 150 aaKnown RBP2.32□□□□□ -2.04
SNX4-202ENST00000465505 TMEM243Q9BU79 118 aa2.32□□□□□ -2.04
SNX4-202ENST00000465505 PARP12Q9H0J9 701 aaKnown RBP2.32□□□□□ -2.04
SNX4-202ENST00000465505 DUOX1Q9NRD9 1551 aa2.32□□□□□ -2.04
SNX4-202ENST00000465505 ZNF407Q9C0G0 2248 aa2.32□□□□□ -2.04
SNX4-202ENST00000465505 CABIN1Q9Y6J0 2220 aa2.32□□□□□ -2.04
SNX4-202ENST00000465505 PTPRSQ13332 1948 aa2.31□□□□□ -2.04
SNX4-202ENST00000465505 IGHV1OR15-1A0A075B7D0 117 aa2.31□□□□□ -2.04
SNX4-202ENST00000465505 TCRBV4S1A1TA0A5B7 111 aa2.31□□□□□ -2.04
SNX4-202ENST00000465505 H7BZZ5 65 aa2.31□□□□□ -2.04
SNX4-202ENST00000465505 K7ERJ3 54 aa2.31□□□□□ -2.04
SNX4-202ENST00000465505 FXYD1O00168 92 aa2.31□□□□□ -2.04
SNX4-202ENST00000465505 IGLV2-8P01709 118 aa2.31□□□□□ -2.04
SNX4-202ENST00000465505 HLA-DPB1P04440 258 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms