RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 MYOZ3Q8TDC0 251 aa13.93□□□□□ -0.18
SYNE4-204ENST00000465425 SMPXQ9UHP9 88 aa13.93□□□□□ -0.18
SYNE4-204ENST00000465425 PRSS47A8MTI9 375 aa13.92□□□□□ -0.18
SYNE4-204ENST00000465425 K7EP13 123 aa13.92□□□□□ -0.18
SYNE4-204ENST00000465425 KLK15Q9H2R5 256 aa13.92□□□□□ -0.18
SYNE4-204ENST00000465425 ZMAT4Q9H898 229 aa13.92□□□□□ -0.18
SYNE4-204ENST00000465425 BRI3O95415 125 aa13.92□□□□□ -0.18
SYNE4-204ENST00000465425 ZFAND2AQ8N6M9 145 aa13.92□□□□□ -0.18
SYNE4-204ENST00000465425 MRAP2Q96G30 205 aa13.92□□□□□ -0.18
SYNE4-204ENST00000465425 AP1S3Q96PC3 154 aa13.92□□□□□ -0.18
SYNE4-204ENST00000465425 IGKV3-7A0A075B6H7 116 aa13.91□□□□□ -0.18
SYNE4-204ENST00000465425 A6NDX4 124 aa13.91□□□□□ -0.18
SYNE4-204ENST00000465425 M0R381 172 aa13.91□□□□□ -0.18
SYNE4-204ENST00000465425 SOCS3O14543 225 aa13.91□□□□□ -0.18
SYNE4-204ENST00000465425 BLCAPP62952 87 aa13.91□□□□□ -0.18
SYNE4-204ENST00000465425 ADAMTSL5Q6ZMM2 481 aa13.91□□□□□ -0.18
SYNE4-204ENST00000465425 COL12A1Q99715 3063 aa13.91□□□□□ -0.18
SYNE4-204ENST00000465425 A0A0G2JLM5 398 aa13.91□□□□□ -0.18
SYNE4-204ENST00000465425 DPM2O94777 84 aa13.91□□□□□ -0.18
SYNE4-204ENST00000465425 SRSF1Q07955 248 aaKnown RBP eCLIP13.91□□□□□ -0.18
SYNE4-204ENST00000465425 RNASE8Q8TDE3 154 aaKnown RBP13.91□□□□□ -0.18
SYNE4-204ENST00000465425 HHLA3Q9XRX5 114 aa13.91□□□□□ -0.18
SYNE4-204ENST00000465425 IGHV4-30-2A0A087WSY4 118 aa13.9□□□□□ -0.18
SYNE4-204ENST00000465425 TRAV8-6A0A0B4J262 113 aa13.9□□□□□ -0.18
SYNE4-204ENST00000465425 MSMBP08118 114 aa13.9□□□□□ -0.18
SYNE4-204ENST00000465425 ASIPP42127 132 aa13.9□□□□□ -0.18
SYNE4-204ENST00000465425 PHLDA3Q9Y5J5 127 aa13.9□□□□□ -0.18
SYNE4-204ENST00000465425 DEFB1P60022 68 aa13.9□□□□□ -0.18
SYNE4-204ENST00000465425 LCNL1Q6ZST4 164 aa13.89□□□□□ -0.19
SYNE4-204ENST00000465425 RHPN1-AS1Q9BWJ2 59 aa13.89□□□□□ -0.19
SYNE4-204ENST00000465425 TMEM8BA6NDV4 472 aa13.89□□□□□ -0.19
SYNE4-204ENST00000465425 ZC2HC1BQ5TFG8 222 aa13.89□□□□□ -0.19
SYNE4-204ENST00000465425 H3BRM9 83 aa13.88□□□□□ -0.19
SYNE4-204ENST00000465425 RNASE4P34096 147 aaKnown RBP13.88□□□□□ -0.19
SYNE4-204ENST00000465425 DAZ1Q9NQZ3 744 aaKnown RBP13.88□□□□□ -0.19
SYNE4-204ENST00000465425 TMEM160Q9NX00 188 aa13.88□□□□□ -0.19
SYNE4-204ENST00000465425 IGKV2D-26A0A0A0MRZ7 120 aa13.87□□□□□ -0.19
SYNE4-204ENST00000465425 F6UB75 175 aa13.87□□□□□ -0.19
SYNE4-204ENST00000465425 KIR3DS1Q14943 382 aa13.87□□□□□ -0.19
SYNE4-204ENST00000465425 ANXA2RQ3ZCQ2 193 aa13.87□□□□□ -0.19
SYNE4-204ENST00000465425 GTSCR1Q86UQ5 136 aa13.87□□□□□ -0.19
SYNE4-204ENST00000465425 SMIM2Q9BVW6 85 aa13.87□□□□□ -0.19
SYNE4-204ENST00000465425 TM4SF20Q53R12 229 aa13.87□□□□□ -0.19
SYNE4-204ENST00000465425 Q6ZS46 218 aa13.87□□□□□ -0.19
SYNE4-204ENST00000465425 DPH3P1Q9H4G8 78 aa13.87□□□□□ -0.19
SYNE4-204ENST00000465425 MRPL35Q9NZE8 188 aaKnown RBP13.86□□□□□ -0.19
SYNE4-204ENST00000465425 C9orf118A6NHY6 69 aa13.86□□□□□ -0.19
SYNE4-204ENST00000465425 SPRY2O43597 315 aa13.86□□□□□ -0.19
SYNE4-204ENST00000465425 IGLV1-40P01703 118 aa13.86□□□□□ -0.19
SYNE4-204ENST00000465425 C14orf178Q8N769 122 aaPredicted RBP13.86□□□□□ -0.19
SYNE4-204ENST00000465425 GAGE10A6NGK3 116 aa13.85□□□□□ -0.19
SYNE4-204ENST00000465425 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.85□□□□□ -0.19
SYNE4-204ENST00000465425 SUMO2P61956 95 aaKnown RBP13.85□□□□□ -0.19
SYNE4-204ENST00000465425 ORMDL2Q53FV1 153 aa13.85□□□□□ -0.19
SYNE4-204ENST00000465425 TTTY13Q9BZ97 58 aa13.85□□□□□ -0.19
SYNE4-204ENST00000465425 SELENOKQ9Y6D0 94 aa13.85□□□□□ -0.19
SYNE4-204ENST00000465425 B4DSR2 109 aa13.84□□□□□ -0.19
SYNE4-204ENST00000465425 MGPP08493 103 aa13.84□□□□□ -0.19
SYNE4-204ENST00000465425 FAM19A4Q96LR4 140 aa13.84□□□□□ -0.19
SYNE4-204ENST00000465425 A0A087WX48 190 aa13.84□□□□□ -0.19
SYNE4-204ENST00000465425 TRBV7-9A0A0J9YWB2 115 aa13.84□□□□□ -0.19
SYNE4-204ENST00000465425 H3BUT2 72 aa13.84□□□□□ -0.19
SYNE4-204ENST00000465425 MED14OSP0DP75 135 aa13.84□□□□□ -0.19
SYNE4-204ENST00000465425 GTF2H5Q6ZYL4 71 aa13.84□□□□□ -0.19
SYNE4-204ENST00000465425 C20orf78Q9BR46 151 aa13.84□□□□□ -0.19
SYNE4-204ENST00000465425 HIGD1BQ9P298 99 aa13.84□□□□□ -0.19
SYNE4-204ENST00000465425 MAP1AP78559 2803 aaPredicted RBP13.83□□□□□ -0.2
SYNE4-204ENST00000465425 GAGE12BA1L429 117 aa13.83□□□□□ -0.2
SYNE4-204ENST00000465425 SRD5A1P18405 259 aa13.83□□□□□ -0.2
SYNE4-204ENST00000465425 RBX1P62877 108 aa13.83□□□□□ -0.2
SYNE4-204ENST00000465425 RASL10AQ92737 203 aa13.83□□□□□ -0.2
SYNE4-204ENST00000465425 RAB37Q96AX2 223 aa13.83□□□□□ -0.2
SYNE4-204ENST00000465425 GNRH2O43555 120 aa13.82□□□□□ -0.2
SYNE4-204ENST00000465425 GCSHP23434 173 aa13.82□□□□□ -0.2
SYNE4-204ENST00000465425 PLNP26678 52 aa13.82□□□□□ -0.2
SYNE4-204ENST00000465425 APRG1Q8IVJ8 170 aa13.82□□□□□ -0.2
SYNE4-204ENST00000465425 CHAC1Q9BUX1 264 aa13.82□□□□□ -0.2
SYNE4-204ENST00000465425 CST9LQ9H4G1 147 aa13.82□□□□□ -0.2
SYNE4-204ENST00000465425 PKD1L2Q7Z442 2459 aa13.82□□□□□ -0.2
SYNE4-204ENST00000465425 ID1P41134 155 aa13.82□□□□□ -0.2
SYNE4-204ENST00000465425 SPG11Q96JI7 2443 aa13.82□□□□□ -0.2
SYNE4-204ENST00000465425 RPL39LQ96EH5 51 aaKnown RBP13.81□□□□□ -0.2
SYNE4-204ENST00000465425 TRBV25-1A0A075B6N4 114 aa13.81□□□□□ -0.2
SYNE4-204ENST00000465425 AVPP01185 164 aa13.81□□□□□ -0.2
SYNE4-204ENST00000465425 SCGB3A1Q96QR1 104 aa13.81□□□□□ -0.2
SYNE4-204ENST00000465425 K7EMI3 77 aa13.8□□□□□ -0.2
SYNE4-204ENST00000465425 RNASE3P12724 160 aaKnown RBP13.8□□□□□ -0.2
SYNE4-204ENST00000465425 HLA-DRB4P13762 266 aa13.8□□□□□ -0.2
SYNE4-204ENST00000465425 CFHR3Q02985 330 aa13.8□□□□□ -0.2
SYNE4-204ENST00000465425 SPOCK3Q9BQ16 436 aa13.8□□□□□ -0.2
SYNE4-204ENST00000465425 NAA38Q9BRA0 125 aaKnown RBP13.8□□□□□ -0.2
SYNE4-204ENST00000465425 HLA-DRB4X5D2U9 266 aa13.8□□□□□ -0.2
SYNE4-204ENST00000465425 K7EMT4 169 aa13.8□□□□□ -0.2
SYNE4-204ENST00000465425 PPP1R17O96001 155 aa13.8□□□□□ -0.2
SYNE4-204ENST00000465425 SLC25A16P16260 332 aa13.8□□□□□ -0.2
SYNE4-204ENST00000465425 TMEM95Q3KNT9 176 aa13.8□□□□□ -0.2
SYNE4-204ENST00000465425 TRAV12-1A0A0B4J245 112 aa13.79□□□□□ -0.2
SYNE4-204ENST00000465425 H7C1H1 209 aa13.79□□□□□ -0.2
SYNE4-204ENST00000465425 C21orf62-AS1Q17RA5 79 aa13.79□□□□□ -0.2
SYNE4-204ENST00000465425 SAMD13Q5VXD3 122 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms