RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 TPRP12270 2363 aaKnown RBP0.03□□□□□ -2.4
PTPN12-210ENST00000464313 OR5A2Q8NGI9 324 aa0.03□□□□□ -2.4
PTPN12-210ENST00000464313 OR9Q1Q8NGQ5 310 aa0.03□□□□□ -2.4
PTPN12-210ENST00000464313 ATG5Q9H1Y0 275 aa0.03□□□□□ -2.4
PTPN12-210ENST00000464313 ZCCHC6Q5VYS8 1495 aaKnown RBP0.03□□□□□ -2.41
PTPN12-210ENST00000464313 IFNA21P01568 189 aa0.02□□□□□ -2.41
PTPN12-210ENST00000464313 CCKP06307 115 aa0.02□□□□□ -2.41
PTPN12-210ENST00000464313 LSM3P62310 102 aaKnown RBP0.02□□□□□ -2.41
PTPN12-210ENST00000464313 TMEM128Q5BJH2 165 aa0.02□□□□□ -2.41
PTPN12-210ENST00000464313 SAMD13Q5VXD3 122 aa0.02□□□□□ -2.41
PTPN12-210ENST00000464313 V9GYQ6 96 aa0.02□□□□□ -2.41
PTPN12-210ENST00000464313 ESPL1Q14674 2120 aa0.02□□□□□ -2.41
PTPN12-210ENST00000464313 MACF1Q9UPN3 7388 aaKnown RBP0.01□□□□□ -2.41
PTPN12-210ENST00000464313 UQCRQO14949 82 aa0.01□□□□□ -2.41
PTPN12-210ENST00000464313 TFF1P04155 84 aa0.01□□□□□ -2.41
PTPN12-210ENST00000464313 TCRAP04437 139 aa0.01□□□□□ -2.41
PTPN12-210ENST00000464313 ADCYAP1P18509 176 aa0.01□□□□□ -2.41
PTPN12-210ENST00000464313 PCBD1P61457 104 aa0.01□□□□□ -2.41
PTPN12-210ENST00000464313 KLKP1Q107X0 134 aa0.01□□□□□ -2.41
PTPN12-210ENST00000464313 UNQ5815/PRO19632Q6UWF5 114 aa0.01□□□□□ -2.41
PTPN12-210ENST00000464313 CENPHQ9H3R5 247 aa0.01□□□□□ -2.41
PTPN12-210ENST00000464313 TMEM14BQ9NUH8 114 aa0.01□□□□□ -2.41
PTPN12-210ENST00000464313 PBRM1Q86U86 1689 aa0.01□□□□□ -2.41
PTPN12-210ENST00000464313 SSPOA2VEC9 5147 aa0□□□□□ -2.41
PTPN12-210ENST00000464313 A0A096LNT2 108 aa0□□□□□ -2.41
PTPN12-210ENST00000464313 MPC1LP0DKB6 136 aa0□□□□□ -2.41
PTPN12-210ENST00000464313 TOMM20LQ6UXN7 152 aa0□□□□□ -2.41
PTPN12-210ENST00000464313 TMEM35BQ8NCS4 154 aa0□□□□□ -2.41
PTPN12-210ENST00000464313 RREB1Q92766 1687 aa0□□□□□ -2.41
PTPN12-210ENST00000464313 PROK2Q9HC23 129 aa0□□□□□ -2.41
PTPN12-210ENST00000464313 ANKRD17O75179 2603 aaKnown RBP-0□□□□□ -2.41
PTPN12-210ENST00000464313 CDK12Q9NYV4 1490 aaPredicted RBP-0.01□□□□□ -2.41
PTPN12-210ENST00000464313 S100GP29377 79 aa-0.01□□□□□ -2.41
PTPN12-210ENST00000464313 OR4S1Q8NGB4 309 aa-0.01□□□□□ -2.41
PTPN12-210ENST00000464313 ABCA1O95477 2261 aa-0.02□□□□□ -2.41
PTPN12-210ENST00000464313 TRAV17A0A0B4J275 112 aa-0.02□□□□□ -2.41
PTPN12-210ENST00000464313 PGRMC1O00264 195 aaKnown RBP-0.02□□□□□ -2.41
PTPN12-210ENST00000464313 S100A5P33763 92 aa-0.02□□□□□ -2.41
PTPN12-210ENST00000464313 POLR2JP52435 117 aaKnown RBP-0.02□□□□□ -2.41
PTPN12-210ENST00000464313 TFAMQ00059 246 aaKnown RBP-0.02□□□□□ -2.41
PTPN12-210ENST00000464313 VMO1Q7Z5L0 202 aa-0.02□□□□□ -2.41
PTPN12-210ENST00000464313 SPRR2GQ9BYE4 73 aa-0.02□□□□□ -2.41
PTPN12-210ENST00000464313 TANC1Q9C0D5 1861 aa-0.02□□□□□ -2.41
PTPN12-210ENST00000464313 LRP5O75197 1615 aa-0.02□□□□□ -2.41
PTPN12-210ENST00000464313 MED23Q9ULK4 1368 aa-0.03□□□□□ -2.41
PTPN12-210ENST00000464313 DLEC1Q9Y238 1755 aa-0.03□□□□□ -2.41
PTPN12-210ENST00000464313 PSPHP78330 225 aa-0.03□□□□□ -2.41
PTPN12-210ENST00000464313 PTPRGP23470 1445 aa-0.04□□□□□ -2.42
PTPN12-210ENST00000464313 KIDINS220Q9ULH0 1771 aa-0.04□□□□□ -2.42
PTPN12-210ENST00000464313 KDM6BO15054 1643 aa-0.04□□□□□ -2.42
PTPN12-210ENST00000464313 OTOGQ6ZRI0 2925 aa-0.04□□□□□ -2.42
PTPN12-210ENST00000464313 HELZP42694 1942 aaKnown RBP-0.04□□□□□ -2.42
PTPN12-210ENST00000464313 METTL1Q9UBP6 276 aaKnown RBP-0.04□□□□□ -2.42
PTPN12-210ENST00000464313 ZFYVE26Q68DK2 2539 aa-0.04□□□□□ -2.42
PTPN12-210ENST00000464313 IGF2RP11717 2491 aa-0.04□□□□□ -2.42
PTPN12-210ENST00000464313 TTC28Q96AY4 2481 aa-0.04□□□□□ -2.42
PTPN12-210ENST00000464313 PTPRZ1P23471 2315 aaPredicted RBP-0.05□□□□□ -2.42
PTPN12-210ENST00000464313 TRBV10-1A0A0K0K1A3 114 aa-0.05□□□□□ -2.42
PTPN12-210ENST00000464313 MT-ND4LP03901 98 aa-0.05□□□□□ -2.42
PTPN12-210ENST00000464313 HSD17B12Q53GQ0 312 aa-0.05□□□□□ -2.42
PTPN12-210ENST00000464313 Q5XG85 94 aa-0.05□□□□□ -2.42
PTPN12-210ENST00000464313 DDA1Q9BW61 102 aa-0.05□□□□□ -2.42
PTPN12-210ENST00000464313 CACNA1HO95180 2353 aa-0.05□□□□□ -2.42
PTPN12-210ENST00000464313 BLMP54132 1417 aaPredicted RBP-0.05□□□□□ -2.42
PTPN12-210ENST00000464313 WDR97A6NE52 1622 aa-0.05□□□□□ -2.42
PTPN12-210ENST00000464313 HRNRQ86YZ3 2850 aaPredicted RBP-0.06□□□□□ -2.42
PTPN12-210ENST00000464313 PNMA8CA0A1B0GUJ8 204 aa-0.06□□□□□ -2.42
PTPN12-210ENST00000464313 HIST1H1BP16401 226 aaKnown RBP-0.06□□□□□ -2.42
PTPN12-210ENST00000464313 SDC4P31431 198 aa-0.06□□□□□ -2.42
PTPN12-210ENST00000464313 DSCR8Q96T75 97 aa-0.06□□□□□ -2.42
PTPN12-210ENST00000464313 NDUFAF1Q9Y375 327 aa-0.06□□□□□ -2.42
PTPN12-210ENST00000464313 SPAG17Q6Q759 2223 aa-0.07□□□□□ -2.42
PTPN12-210ENST00000464313 CXorf51AA0A1B0GTR3 108 aa-0.07□□□□□ -2.42
PTPN12-210ENST00000464313 C9JAW5 83 aa-0.07□□□□□ -2.42
PTPN12-210ENST00000464313 J3KT08 172 aa-0.07□□□□□ -2.42
PTPN12-210ENST00000464313 OR2H2O95918 312 aa-0.07□□□□□ -2.42
PTPN12-210ENST00000464313 PAEPP09466 180 aa-0.07□□□□□ -2.42
PTPN12-210ENST00000464313 NEFHP12036 1026 aa-0.07□□□□□ -2.42
PTPN12-210ENST00000464313 SLC25A26Q70HW3 274 aa-0.07□□□□□ -2.42
PTPN12-210ENST00000464313 SMIM15Q7Z3B0 74 aa-0.07□□□□□ -2.42
PTPN12-210ENST00000464313 OR8I2Q8N0Y5 310 aa-0.07□□□□□ -2.42
PTPN12-210ENST00000464313 TMEM141Q96I45 108 aa-0.07□□□□□ -2.42
PTPN12-210ENST00000464313 CALML5Q9NZT1 146 aa-0.07□□□□□ -2.42
PTPN12-210ENST00000464313 PIEZO1Q92508 2521 aa-0.07□□□□□ -2.42
PTPN12-210ENST00000464313 OVOS2A0A0G2JMS6 1433 aa-0.07□□□□□ -2.42
PTPN12-210ENST00000464313 ARHGAP31Q2M1Z3 1444 aa-0.07□□□□□ -2.42
PTPN12-210ENST00000464313 LRP1Q07954 4544 aaKnown RBP-0.07□□□□□ -2.42
PTPN12-210ENST00000464313 ABCA12Q86UK0 2595 aa-0.07□□□□□ -2.42
PTPN12-210ENST00000464313 XIRP1Q702N8 1843 aaKnown RBP-0.08□□□□□ -2.42
PTPN12-210ENST00000464313 ABCA4P78363 2273 aa-0.08□□□□□ -2.42
PTPN12-210ENST00000464313 DPM2O94777 84 aa-0.08□□□□□ -2.42
PTPN12-210ENST00000464313 PYYP10082 97 aa-0.08□□□□□ -2.42
PTPN12-210ENST00000464313 PLGLB1Q02325 96 aa-0.08□□□□□ -2.42
PTPN12-210ENST00000464313 TMEM244Q5VVB8 128 aa-0.08□□□□□ -2.42
PTPN12-210ENST00000464313 TMEM91Q6ZNR0 172 aa-0.08□□□□□ -2.42
PTPN12-210ENST00000464313 SELENOSQ9BQE4 189 aa-0.08□□□□□ -2.42
PTPN12-210ENST00000464313 SLC35B3Q9H1N7 401 aa-0.08□□□□□ -2.42
PTPN12-210ENST00000464313 JMJD1CQ15652 2540 aa-0.08□□□□□ -2.42
PTPN12-210ENST00000464313 TEX49A0A1B0GTD5 131 aa-0.09□□□□□ -2.42
PTPN12-210ENST00000464313 SPINK1P00995 79 aa-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms