RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 RPL19P84098 196 aaKnown RBP10.38□□□□□ -0.75
COL6A1-202ENST00000463060 RNF212Q495C1 297 aa10.38□□□□□ -0.75
COL6A1-202ENST00000463060 CT83Q5H943 113 aa10.38□□□□□ -0.75
COL6A1-202ENST00000463060 DEFB121Q5J5C9 76 aa10.38□□□□□ -0.75
COL6A1-202ENST00000463060 MUC21Q5SSG8 566 aa10.38□□□□□ -0.75
COL6A1-202ENST00000463060 ATRAIDQ6UW56 229 aa10.38□□□□□ -0.75
COL6A1-202ENST00000463060 SBSPONQ8IVN8 264 aa10.38□□□□□ -0.75
COL6A1-202ENST00000463060 LINC01587Q99440 93 aa10.38□□□□□ -0.75
COL6A1-202ENST00000463060 NEU1Q99519 415 aa10.38□□□□□ -0.75
COL6A1-202ENST00000463060 RPP21Q9H633 154 aaKnown RBP10.38□□□□□ -0.75
COL6A1-202ENST00000463060 TP53TG3Q9ULZ0 132 aa10.38□□□□□ -0.75
COL6A1-202ENST00000463060 GOLT1BQ9Y3E0 138 aa10.38□□□□□ -0.75
COL6A1-202ENST00000463060 X6R8D5 127 aa10.38□□□□□ -0.75
COL6A1-202ENST00000463060 A0A087WWC5 75 aa10.37□□□□□ -0.75
COL6A1-202ENST00000463060 TMEM189A5PLL7 270 aa10.37□□□□□ -0.75
COL6A1-202ENST00000463060 GNRH2O43555 120 aa10.37□□□□□ -0.75
COL6A1-202ENST00000463060 GATCO43716 136 aaKnown RBP10.37□□□□□ -0.75
COL6A1-202ENST00000463060 SNAPINO95295 136 aa10.37□□□□□ -0.75
COL6A1-202ENST00000463060 MT-ND4LP03901 98 aa10.37□□□□□ -0.75
COL6A1-202ENST00000463060 CXCL1P09341 107 aa10.37□□□□□ -0.75
COL6A1-202ENST00000463060 AZU1P20160 251 aa10.37□□□□□ -0.75
COL6A1-202ENST00000463060 FAM159AQ6UWV7 190 aa10.37□□□□□ -0.75
COL6A1-202ENST00000463060 C15orf54Q8N8G6 183 aa10.37□□□□□ -0.75
COL6A1-202ENST00000463060 OR2D3Q8NGH3 330 aa10.37□□□□□ -0.75
COL6A1-202ENST00000463060 ANAPC16Q96DE5 110 aa10.37□□□□□ -0.75
COL6A1-202ENST00000463060 KCNS1Q96KK3 526 aa10.37□□□□□ -0.75
COL6A1-202ENST00000463060 TP53TG1Q9Y2A0 90 aa10.37□□□□□ -0.75
COL6A1-202ENST00000463060 PPP1R2P9O14990 202 aa10.36□□□□□ -0.75
COL6A1-202ENST00000463060 S100A1P23297 94 aa10.36□□□□□ -0.75
COL6A1-202ENST00000463060 RHEBQ15382 184 aa10.36□□□□□ -0.75
COL6A1-202ENST00000463060 DEFB135Q30KP9 77 aa10.36□□□□□ -0.75
COL6A1-202ENST00000463060 OVOL2Q9BRP0 275 aa10.36□□□□□ -0.75
COL6A1-202ENST00000463060 IGHV3-16A0A0C4DH30 117 aa10.35□□□□□ -0.75
COL6A1-202ENST00000463060 SMIM9A6NGZ8 99 aa10.35□□□□□ -0.75
COL6A1-202ENST00000463060 ZNF705GA8MUZ8 300 aaPredicted RBP10.35□□□□□ -0.75
COL6A1-202ENST00000463060 SPRY2O43597 315 aa10.35□□□□□ -0.75
COL6A1-202ENST00000463060 TYMSP04818 313 aa10.35□□□□□ -0.75
COL6A1-202ENST00000463060 IGLC6P0CF74 106 aa10.35□□□□□ -0.75
COL6A1-202ENST00000463060 FOXA3P55318 350 aaPredicted RBP10.35□□□□□ -0.75
COL6A1-202ENST00000463060 RPS20P60866 119 aaKnown RBP10.35□□□□□ -0.75
COL6A1-202ENST00000463060 MRAPQ8TCY5 172 aa10.35□□□□□ -0.75
COL6A1-202ENST00000463060 GTSF1Q8WW33 167 aa10.35□□□□□ -0.75
COL6A1-202ENST00000463060 RCHY1Q96PM5 261 aa10.35□□□□□ -0.75
COL6A1-202ENST00000463060 TM2D3Q9BRN9 247 aa10.35□□□□□ -0.75
COL6A1-202ENST00000463060 TMEM208Q9BTX3 173 aa10.35□□□□□ -0.75
COL6A1-202ENST00000463060 CTDSP1Q9GZU7 261 aa10.35□□□□□ -0.75
COL6A1-202ENST00000463060 TMEM242Q9NWH2 141 aa10.35□□□□□ -0.75
COL6A1-202ENST00000463060 NAGKQ9UJ70 344 aa10.35□□□□□ -0.75
COL6A1-202ENST00000463060 IGHV3OR16-12A0A075B7B8 117 aa10.34□□□□□ -0.75
COL6A1-202ENST00000463060 TMSB15BA0A087X1C1 80 aa10.34□□□□□ -0.75
COL6A1-202ENST00000463060 SMIM27A0A1W2PRY6 76 aa10.34□□□□□ -0.75
COL6A1-202ENST00000463060 PLAC8L1A1L4L8 177 aa10.34□□□□□ -0.75
COL6A1-202ENST00000463060 GRIFINA4D1Z8 144 aa10.34□□□□□ -0.75
COL6A1-202ENST00000463060 FAM231BA6NCW3 169 aa10.34□□□□□ -0.75
COL6A1-202ENST00000463060 A8MWL6 223 aa10.34□□□□□ -0.75
COL6A1-202ENST00000463060 GZMBP10144 247 aa10.34□□□□□ -0.75
COL6A1-202ENST00000463060 RNASE3P12724 160 aaKnown RBP10.34□□□□□ -0.75
COL6A1-202ENST00000463060 DEFA6Q01524 100 aa10.34□□□□□ -0.75
COL6A1-202ENST00000463060 C11orf72Q8NBR9 251 aa10.34□□□□□ -0.75
COL6A1-202ENST00000463060 RNASE8Q8TDE3 154 aaKnown RBP10.34□□□□□ -0.75
COL6A1-202ENST00000463060 TSKUQ8WUA8 353 aa10.34□□□□□ -0.75
COL6A1-202ENST00000463060 SSBP4Q9BWG4 385 aaPredicted RBP10.34□□□□□ -0.75
COL6A1-202ENST00000463060 MDFICQ9P1T7 246 aa10.34□□□□□ -0.75
COL6A1-202ENST00000463060 DNAH9Q9NYC9 4486 aa10.33□□□□□ -0.76
COL6A1-202ENST00000463060 CBY3A6NI87 242 aa10.33□□□□□ -0.76
COL6A1-202ENST00000463060 IL17DQ8TAD2 202 aa10.33□□□□□ -0.76
COL6A1-202ENST00000463060 B9D2Q9BPU9 175 aa10.33□□□□□ -0.76
COL6A1-202ENST00000463060 GFRA4Q9GZZ7 299 aa10.33□□□□□ -0.76
COL6A1-202ENST00000463060 SCRT2Q9NQ03 307 aa10.33□□□□□ -0.76
COL6A1-202ENST00000463060 RPS10P5Q9NQ39 176 aa10.33□□□□□ -0.76
COL6A1-202ENST00000463060 IL36BQ9NZH7 164 aa10.33□□□□□ -0.76
COL6A1-202ENST00000463060 PRKDCP78527 4128 aaKnown RBP10.32□□□□□ -0.76
COL6A1-202ENST00000463060 TRGV11A0A075B6L2 103 aa10.32□□□□□ -0.76
COL6A1-202ENST00000463060 XKRY2A2RUG3 117 aa10.32□□□□□ -0.76
COL6A1-202ENST00000463060 SNAI2O43623 268 aa10.32□□□□□ -0.76
COL6A1-202ENST00000463060 MED14OSP0DP75 135 aa10.32□□□□□ -0.76
COL6A1-202ENST00000463060 ZNF493Q6ZR52 646 aa10.32□□□□□ -0.76
COL6A1-202ENST00000463060 OR11H2Q8NH07 326 aa10.32□□□□□ -0.76
COL6A1-202ENST00000463060 TMEM263Q8WUH6 116 aaKnown RBP10.32□□□□□ -0.76
COL6A1-202ENST00000463060 C9orf85Q96MD7 179 aa10.32□□□□□ -0.76
COL6A1-202ENST00000463060 RETNQ9HD89 108 aa10.32□□□□□ -0.76
COL6A1-202ENST00000463060 HUWE1Q7Z6Z7 4374 aaKnown RBP10.31□□□□□ -0.76
COL6A1-202ENST00000463060 OR5AL1P0C617 328 aa10.31□□□□□ -0.76
COL6A1-202ENST00000463060 ARMS2P0C7Q2 107 aa10.31□□□□□ -0.76
COL6A1-202ENST00000463060 HTN1P15515 57 aa10.31□□□□□ -0.76
COL6A1-202ENST00000463060 ASIPP42127 132 aa10.31□□□□□ -0.76
COL6A1-202ENST00000463060 RRN3P1Q2M238 152 aa10.31□□□□□ -0.76
COL6A1-202ENST00000463060 Q8NAQ8 132 aa10.31□□□□□ -0.76
COL6A1-202ENST00000463060 IMMP2LQ96T52 175 aa10.31□□□□□ -0.76
COL6A1-202ENST00000463060 A0A1W2PPQ1 181 aa10.3□□□□□ -0.76
COL6A1-202ENST00000463060 MIFP14174 115 aa10.3□□□□□ -0.76
COL6A1-202ENST00000463060 CTRLP40313 264 aa10.3□□□□□ -0.76
COL6A1-202ENST00000463060 TCL1AP56279 114 aa10.3□□□□□ -0.76
COL6A1-202ENST00000463060 PTH2Q96A98 100 aa10.3□□□□□ -0.76
COL6A1-202ENST00000463060 C16orf74Q96GX8 76 aa10.3□□□□□ -0.76
COL6A1-202ENST00000463060 CNFNQ9BYD5 112 aa10.3□□□□□ -0.76
COL6A1-202ENST00000463060 GSN-AS1Q9NRJ2 163 aa10.3□□□□□ -0.76
COL6A1-202ENST00000463060 MUC4Q99102 2169 aa10.3□□□□□ -0.76
COL6A1-202ENST00000463060 TENM3Q9P273 2699 aa10.3□□□□□ -0.76
COL6A1-202ENST00000463060 CXorf65A6NEN9 183 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms