RNA–Protein interactions for RNA: ENST00000461983.5

C1S-209, Transcript of complement C1s, human

TSL 2

Gene C1S, Length 950 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1S-209	ENST00000461983		V9GYV3	84 aa		11.35	□□□□□ -0.59
C1S-209	ENST00000461983	TRGV11	A0A075B6L2	103 aa		11.34	□□□□□ -0.59
C1S-209	ENST00000461983	TRAV12-2	A0A075B6T6	113 aa		11.34	□□□□□ -0.59
C1S-209	ENST00000461983	IGHV1OR15-1	A0A075B7D0	117 aa		11.34	□□□□□ -0.59
C1S-209	ENST00000461983		F2Z2F3	143 aa		11.34	□□□□□ -0.59
C1S-209	ENST00000461983	CRX	O43186	299 aa	Predicted RBP	11.34	□□□□□ -0.59
C1S-209	ENST00000461983	LINC00322	Q6ZN03	302 aa	Predicted RBP	11.34	□□□□□ -0.59
C1S-209	ENST00000461983	BORCS7	Q96B45	105 aa		11.34	□□□□□ -0.59
C1S-209	ENST00000461983	LINC01587	Q99440	93 aa		11.34	□□□□□ -0.59
C1S-209	ENST00000461983	IL36B	Q9NZH7	164 aa		11.34	□□□□□ -0.59
C1S-209	ENST00000461983	NAT8B	Q9UHF3	227 aa		11.34	□□□□□ -0.59
C1S-209	ENST00000461983	FOXA3	P55318	350 aa	Predicted RBP	11.33	□□□□□ -0.6
C1S-209	ENST00000461983	FXYD7	P58549	80 aa		11.33	□□□□□ -0.6
C1S-209	ENST00000461983	DNLZ	Q5SXM8	178 aa		11.33	□□□□□ -0.6
C1S-209	ENST00000461983	PRR9	Q5T870	116 aa		11.33	□□□□□ -0.6
C1S-209	ENST00000461983	NAGK	Q9UJ70	344 aa		11.33	□□□□□ -0.6
C1S-209	ENST00000461983	TRRAP	Q9Y4A5	3859 aa		11.33	□□□□□ -0.6
C1S-209	ENST00000461983	SMIM27	A0A1W2PRY6	76 aa		11.32	□□□□□ -0.6
C1S-209	ENST00000461983	SMIM9	A6NGZ8	99 aa		11.32	□□□□□ -0.6
C1S-209	ENST00000461983	MED14OS	P0DP75	135 aa		11.32	□□□□□ -0.6
C1S-209	ENST00000461983	S100A4	P26447	101 aa	Known RBP	11.32	□□□□□ -0.6
C1S-209	ENST00000461983	ASIP	P42127	132 aa		11.32	□□□□□ -0.6
C1S-209	ENST00000461983	ANXA2R	Q3ZCQ2	193 aa		11.32	□□□□□ -0.6
C1S-209	ENST00000461983		Q6ZWC4	215 aa		11.32	□□□□□ -0.6
C1S-209	ENST00000461983	CBY3	A6NI87	242 aa		11.31	□□□□□ -0.6
C1S-209	ENST00000461983	WDR73	Q6P4I2	378 aa		11.31	□□□□□ -0.6
C1S-209	ENST00000461983	ZNF493	Q6ZR52	646 aa		11.31	□□□□□ -0.6
C1S-209	ENST00000461983	IGKV3D-20	A0A0C4DH25	116 aa		11.3	□□□□□ -0.6
C1S-209	ENST00000461983		A0A1B0GW15	77 aa		11.3	□□□□□ -0.6
C1S-209	ENST00000461983	S100A8	P05109	93 aa		11.3	□□□□□ -0.6
C1S-209	ENST00000461983	COX19	Q49B96	90 aa		11.3	□□□□□ -0.6
C1S-209	ENST00000461983	TP53TG3	Q9ULZ0	132 aa		11.3	□□□□□ -0.6
C1S-209	ENST00000461983	CACNG7	P62955	275 aa		11.29	□□□□□ -0.6
C1S-209	ENST00000461983	KIR3DS1	Q14943	382 aa		11.29	□□□□□ -0.6
C1S-209	ENST00000461983	MUC21	Q5SSG8	566 aa		11.29	□□□□□ -0.6
C1S-209	ENST00000461983	ATRAID	Q6UW56	229 aa		11.29	□□□□□ -0.6
C1S-209	ENST00000461983	FER1L6-AS1	Q8NA97	138 aa		11.29	□□□□□ -0.6
C1S-209	ENST00000461983	CSNK1G2-AS1	Q8NCQ2	148 aa		11.29	□□□□□ -0.6
C1S-209	ENST00000461983	RCHY1	Q96PM5	261 aa		11.29	□□□□□ -0.6
C1S-209	ENST00000461983	NEU1	Q99519	415 aa		11.29	□□□□□ -0.6
C1S-209	ENST00000461983	TP53TG1	Q9Y2A0	90 aa		11.29	□□□□□ -0.6
C1S-209	ENST00000461983	PKD1L1	Q8TDX9	2849 aa		11.29	□□□□□ -0.6
C1S-209	ENST00000461983	TMSB15B	A0A087X1C1	80 aa		11.28	□□□□□ -0.6
C1S-209	ENST00000461983	HIGD1C	A8MV81	97 aa		11.28	□□□□□ -0.6
C1S-209	ENST00000461983	GIG44	P09565	113 aa	Predicted RBP	11.28	□□□□□ -0.6
C1S-209	ENST00000461983	OR5AL1	P0C617	328 aa		11.28	□□□□□ -0.6
C1S-209	ENST00000461983	ZNF415	Q09FC8	603 aa		11.28	□□□□□ -0.6
C1S-209	ENST00000461983	RIG	Q13278	110 aa		11.28	□□□□□ -0.6
C1S-209	ENST00000461983	ZNF705A	Q6ZN79	300 aa	Predicted RBP	11.28	□□□□□ -0.6
C1S-209	ENST00000461983	ATP5L2	Q7Z4Y8	100 aa		11.28	□□□□□ -0.6
C1S-209	ENST00000461983	SPX	Q9BT56	116 aa		11.28	□□□□□ -0.6
C1S-209	ENST00000461983	C11orf21	Q9P2W6	132 aa		11.28	□□□□□ -0.6
C1S-209	ENST00000461983	RRN3P1	Q2M238	152 aa		11.27	□□□□□ -0.61
C1S-209	ENST00000461983	RASL11A	Q6T310	242 aa		11.27	□□□□□ -0.61
C1S-209	ENST00000461983	C1orf158	Q8N1D5	194 aa		11.27	□□□□□ -0.61
C1S-209	ENST00000461983	C16orf74	Q96GX8	76 aa		11.27	□□□□□ -0.61
C1S-209	ENST00000461983	NDUFAF3	Q9BU61	184 aa		11.27	□□□□□ -0.61
C1S-209	ENST00000461983	SSBP4	Q9BWG4	385 aa	Predicted RBP	11.27	□□□□□ -0.61
C1S-209	ENST00000461983	CMYA5	Q8N3K9	4069 aa		11.27	□□□□□ -0.61
C1S-209	ENST00000461983	TRBV24-1	A0A075B6N3	115 aa		11.26	□□□□□ -0.61
C1S-209	ENST00000461983		A0A1B0GUT8	65 aa		11.26	□□□□□ -0.61
C1S-209	ENST00000461983	TYMS	P04818	313 aa		11.26	□□□□□ -0.61
C1S-209	ENST00000461983	FRMD6-AS1	P0C7T7	363 aa		11.26	□□□□□ -0.61
C1S-209	ENST00000461983	IGLC6	P0CF74	106 aa		11.26	□□□□□ -0.61
C1S-209	ENST00000461983	CTRL	P40313	264 aa		11.26	□□□□□ -0.61
C1S-209	ENST00000461983	PIK3CD-AS1	Q5SR53	167 aa		11.26	□□□□□ -0.61
C1S-209	ENST00000461983	SYT8	Q8NBV8	401 aa		11.26	□□□□□ -0.61
C1S-209	ENST00000461983	TMEM263	Q8WUH6	116 aa	Known RBP	11.26	□□□□□ -0.61
C1S-209	ENST00000461983	PHLDA3	Q9Y5J5	127 aa		11.26	□□□□□ -0.61
C1S-209	ENST00000461983	IGHV3OR16-12	A0A075B7B8	117 aa		11.25	□□□□□ -0.61
C1S-209	ENST00000461983	IGHV3-16	A0A0C4DH30	117 aa		11.25	□□□□□ -0.61
C1S-209	ENST00000461983	GRIFIN	A4D1Z8	144 aa		11.25	□□□□□ -0.61
C1S-209	ENST00000461983	GNRH2	O43555	120 aa		11.25	□□□□□ -0.61
C1S-209	ENST00000461983	SNAI2	O43623	268 aa		11.25	□□□□□ -0.61
C1S-209	ENST00000461983	ARMS2	P0C7Q2	107 aa		11.25	□□□□□ -0.61
C1S-209	ENST00000461983	HTN1	P15515	57 aa		11.25	□□□□□ -0.61
C1S-209	ENST00000461983	DEFB121	Q5J5C9	76 aa		11.25	□□□□□ -0.61
C1S-209	ENST00000461983	SMIM15	Q7Z3B0	74 aa		11.25	□□□□□ -0.61
C1S-209	ENST00000461983	NUP35	Q8NFH5	326 aa		11.25	□□□□□ -0.61
C1S-209	ENST00000461983	PTH2	Q96A98	100 aa		11.25	□□□□□ -0.61
C1S-209	ENST00000461983	RNF183	Q96D59	192 aa		11.25	□□□□□ -0.61
C1S-209	ENST00000461983	TPPP3	Q9BW30	176 aa		11.25	□□□□□ -0.61
C1S-209	ENST00000461983	SNURFL	B1AK76	121 aa		11.24	□□□□□ -0.61
C1S-209	ENST00000461983	SPRY2	O43597	315 aa		11.24	□□□□□ -0.61
C1S-209	ENST00000461983	RBMY1A1	P0DJD3	496 aa	Known RBP	11.24	□□□□□ -0.61
C1S-209	ENST00000461983	RBMY1C	P0DJD4	496 aa		11.24	□□□□□ -0.61
C1S-209	ENST00000461983	MIF	P14174	115 aa		11.24	□□□□□ -0.61
C1S-209	ENST00000461983	TCL1A	P56279	114 aa		11.24	□□□□□ -0.61
C1S-209	ENST00000461983	FAM3B	P58499	235 aa	Predicted RBP	11.24	□□□□□ -0.61
C1S-209	ENST00000461983	RBMY1F	Q15415	496 aa	Known RBP	11.24	□□□□□ -0.61
C1S-209	ENST00000461983	SPANXN1	Q5VSR9	72 aa		11.24	□□□□□ -0.61
C1S-209	ENST00000461983	TMEM88	Q6PEY1	159 aa		11.24	□□□□□ -0.61
C1S-209	ENST00000461983	LYZL1	Q6UWQ5	148 aa		11.24	□□□□□ -0.61
C1S-209	ENST00000461983	ZFP82	Q8N141	532 aa		11.24	□□□□□ -0.61
C1S-209	ENST00000461983	GTSF1	Q8WW33	167 aa		11.24	□□□□□ -0.61
C1S-209	ENST00000461983	PGLYRP4	Q96LB8	373 aa		11.24	□□□□□ -0.61
C1S-209	ENST00000461983	CNFN	Q9BYD5	112 aa		11.24	□□□□□ -0.61
C1S-209	ENST00000461983	SCRT2	Q9NQ03	307 aa		11.24	□□□□□ -0.61
C1S-209	ENST00000461983	URGCP-MRPS24	S4R325	110 aa		11.24	□□□□□ -0.61
C1S-209	ENST00000461983	IGHV4-4	A0A075B6R2	117 aa		11.23	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms