RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 COMMD3Q9UBI1 195 aa0.8□□□□□ -2.28
VCL-203ENST00000461383 AFDNP55196 1824 aaKnown RBP0.8□□□□□ -2.28
VCL-203ENST00000461383 KDM5CP41229 1560 aa0.79□□□□□ -2.28
VCL-203ENST00000461383 BCORL1Q5H9F3 1711 aa0.79□□□□□ -2.28
VCL-203ENST00000461383 A0A0G2JMM0 328 aa0.79□□□□□ -2.28
VCL-203ENST00000461383 A0A1B0GW64 132 aa0.79□□□□□ -2.28
VCL-203ENST00000461383 IGKCP01834 107 aa0.79□□□□□ -2.28
VCL-203ENST00000461383 RBP4P02753 201 aa0.79□□□□□ -2.28
VCL-203ENST00000461383 HLA-DRB4P13762 266 aa0.79□□□□□ -2.28
VCL-203ENST00000461383 ADCYAP1P18509 176 aa0.79□□□□□ -2.28
VCL-203ENST00000461383 POLR2JP52435 117 aaKnown RBP0.79□□□□□ -2.28
VCL-203ENST00000461383 CAV3P56539 151 aa0.79□□□□□ -2.28
VCL-203ENST00000461383 FXYD6P3P58550 94 aa0.79□□□□□ -2.28
VCL-203ENST00000461383 PLGLB1Q02325 96 aa0.79□□□□□ -2.28
VCL-203ENST00000461383 Q5XG85 94 aa0.79□□□□□ -2.28
VCL-203ENST00000461383 LYPD5Q6UWN5 251 aa0.79□□□□□ -2.28
VCL-203ENST00000461383 TMEM91Q6ZNR0 172 aa0.79□□□□□ -2.28
VCL-203ENST00000461383 HLA-DRB4X5D2U9 266 aa0.79□□□□□ -2.28
VCL-203ENST00000461383 ARAP1Q96P48 1450 aa0.79□□□□□ -2.28
VCL-203ENST00000461383 A6NN06 94 aa0.78□□□□□ -2.28
VCL-203ENST00000461383 HIGD1CA8MV81 97 aa0.78□□□□□ -2.28
VCL-203ENST00000461383 SPINT3P49223 89 aa0.78□□□□□ -2.28
VCL-203ENST00000461383 XAF1Q6GPH4 301 aa0.78□□□□□ -2.28
VCL-203ENST00000461383 DMAC1Q96GE9 116 aa0.78□□□□□ -2.28
VCL-203ENST00000461383 ATG5Q9H1Y0 275 aa0.78□□□□□ -2.28
VCL-203ENST00000461383 MRPL35Q9NZE8 188 aaKnown RBP0.78□□□□□ -2.28
VCL-203ENST00000461383 GSKIPQ9P0R6 139 aa0.78□□□□□ -2.28
VCL-203ENST00000461383 CTTNBP2Q8WZ74 1663 aa0.78□□□□□ -2.29
VCL-203ENST00000461383 KIDINS220Q9ULH0 1771 aa0.78□□□□□ -2.29
VCL-203ENST00000461383 MYH6P13533 1939 aa0.77□□□□□ -2.29
VCL-203ENST00000461383 TRAV17A0A0B4J275 112 aa0.77□□□□□ -2.29
VCL-203ENST00000461383 YPEL1O60688 119 aa0.77□□□□□ -2.29
VCL-203ENST00000461383 IGF2P01344 180 aa0.77□□□□□ -2.29
VCL-203ENST00000461383 CD3DP04234 171 aa0.77□□□□□ -2.29
VCL-203ENST00000461383 AKR1D1P51857 326 aa0.77□□□□□ -2.29
VCL-203ENST00000461383 CKS1BP61024 79 aa0.77□□□□□ -2.29
VCL-203ENST00000461383 SPINK9Q5DT21 86 aa0.77□□□□□ -2.29
VCL-203ENST00000461383 CLLU1Q5K131 121 aa0.77□□□□□ -2.29
VCL-203ENST00000461383 MMGT1Q8N4V1 131 aa0.77□□□□□ -2.29
VCL-203ENST00000461383 MAFIPQ8WZ33 124 aa0.77□□□□□ -2.29
VCL-203ENST00000461383 ARHGEF10O15013 1369 aa0.77□□□□□ -2.29
VCL-203ENST00000461383 ARPC5O15511 151 aa0.76□□□□□ -2.29
VCL-203ENST00000461383 EVI2AP22794 236 aa0.76□□□□□ -2.29
VCL-203ENST00000461383 NCS1P62166 190 aa0.76□□□□□ -2.29
VCL-203ENST00000461383 ALX1Q15699 326 aa0.76□□□□□ -2.29
VCL-203ENST00000461383 MORN2Q502X0 79 aa0.76□□□□□ -2.29
VCL-203ENST00000461383 VPS25Q9BRG1 176 aa0.76□□□□□ -2.29
VCL-203ENST00000461383 TAS2R8Q9NYW2 309 aa0.76□□□□□ -2.29
VCL-203ENST00000461383 DNAJC15Q9Y5T4 150 aa0.76□□□□□ -2.29
VCL-203ENST00000461383 ARHGAP31Q2M1Z3 1444 aa0.75□□□□□ -2.29
VCL-203ENST00000461383 LOC101927531A0A1B0GV80 90 aa0.75□□□□□ -2.29
VCL-203ENST00000461383 J3QR89 54 aa0.75□□□□□ -2.29
VCL-203ENST00000461383 FXYD1O00168 92 aa0.75□□□□□ -2.29
VCL-203ENST00000461383 APOC1P02654 83 aa0.75□□□□□ -2.29
VCL-203ENST00000461383 PRB4P10163 310 aaPredicted RBP0.75□□□□□ -2.29
VCL-203ENST00000461383 ESPL1Q14674 2120 aa0.75□□□□□ -2.29
VCL-203ENST00000461383 SLC25A26Q70HW3 274 aa0.75□□□□□ -2.29
VCL-203ENST00000461383 SNX29P2Q8IUI4 249 aa0.75□□□□□ -2.29
VCL-203ENST00000461383 ATOH7Q8N100 152 aa0.75□□□□□ -2.29
VCL-203ENST00000461383 PLAC4Q8WY50 150 aa0.75□□□□□ -2.29
VCL-203ENST00000461383 SMIM3Q9BZL3 60 aa0.75□□□□□ -2.29
VCL-203ENST00000461383 NOP16Q9Y3C1 178 aaKnown RBP0.75□□□□□ -2.29
VCL-203ENST00000461383 M0R2Z0 102 aa0.74□□□□□ -2.29
VCL-203ENST00000461383 CCKP06307 115 aa0.74□□□□□ -2.29
VCL-203ENST00000461383 ZNF137PP52743 207 aa0.74□□□□□ -2.29
VCL-203ENST00000461383 HIST1H1AQ02539 215 aaPredicted RBP0.74□□□□□ -2.29
VCL-203ENST00000461383 FXYD3Q14802 87 aa0.74□□□□□ -2.29
VCL-203ENST00000461383 C6orf52Q5T4I8 152 aa0.74□□□□□ -2.29
VCL-203ENST00000461383 PPDPFLQ8WWR9 84 aa0.74□□□□□ -2.29
VCL-203ENST00000461383 LINC00208Q96KT6 92 aa0.74□□□□□ -2.29
VCL-203ENST00000461383 LOC285556D6RIA3 1793 aa0.74□□□□□ -2.29
VCL-203ENST00000461383 LRP5O75197 1615 aa0.74□□□□□ -2.29
VCL-203ENST00000461383 PLXNA2O75051 1894 aa0.73□□□□□ -2.29
VCL-203ENST00000461383 DLEC1Q9Y238 1755 aa0.73□□□□□ -2.29
VCL-203ENST00000461383 TRBV10-1A0A0K0K1A3 114 aa0.73□□□□□ -2.29
VCL-203ENST00000461383 K7EIL1 84 aa0.73□□□□□ -2.29
VCL-203ENST00000461383 SMCO1Q147U7 214 aa0.73□□□□□ -2.29
VCL-203ENST00000461383 ZNF56Q15929 161 aa0.73□□□□□ -2.29
VCL-203ENST00000461383 ATP6V0E2Q8NHE4 81 aa0.73□□□□□ -2.29
VCL-203ENST00000461383 COPZ2Q9P299 210 aa0.73□□□□□ -2.29
VCL-203ENST00000461383 KIF13AQ9H1H9 1805 aa0.73□□□□□ -2.29
VCL-203ENST00000461383 FHAD1B1AJZ9 1412 aa0.72□□□□□ -2.29
VCL-203ENST00000461383 PTPRGP23470 1445 aa0.72□□□□□ -2.29
VCL-203ENST00000461383 CCDC171Q6TFL3 1326 aa0.72□□□□□ -2.29
VCL-203ENST00000461383 TRAV2A0A0B4J234 112 aa0.72□□□□□ -2.29
VCL-203ENST00000461383 LOC105371267A0A1B0GV96 52 aa0.72□□□□□ -2.29
VCL-203ENST00000461383 J3QLW9 94 aa0.72□□□□□ -2.29
VCL-203ENST00000461383 SPINK13Q1W4C9 94 aa0.72□□□□□ -2.29
VCL-203ENST00000461383 GLYATL3Q5SZD4 288 aa0.72□□□□□ -2.29
VCL-203ENST00000461383 C10orf99Q6UWK7 81 aa0.72□□□□□ -2.29
VCL-203ENST00000461383 C5orf56Q8N8D9 126 aa0.72□□□□□ -2.29
VCL-203ENST00000461383 DYNLRB2Q8TF09 96 aa0.72□□□□□ -2.29
VCL-203ENST00000461383 FBN2P35556 2912 aa0.72□□□□□ -2.29
VCL-203ENST00000461383 CDK12Q9NYV4 1490 aaPredicted RBP0.72□□□□□ -2.29
VCL-203ENST00000461383 ABCA1O95477 2261 aa0.72□□□□□ -2.29
VCL-203ENST00000461383 ABCA4P78363 2273 aa0.72□□□□□ -2.29
VCL-203ENST00000461383 CEP152O94986 1710 aa0.72□□□□□ -2.29
VCL-203ENST00000461383 OVOS2A0A0J9YW53 1432 aa0.72□□□□□ -2.29
VCL-203ENST00000461383 OVOS2Q6IE36 1432 aa0.72□□□□□ -2.29
VCL-203ENST00000461383 RREB1Q92766 1687 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms