RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 Q0VG73 95 aa2.29□□□□□ -2.04
CCDC50-203ENST00000460064 ASB16-AS1Q495Z4 193 aa2.29□□□□□ -2.04
CCDC50-203ENST00000460064 SPRNQ5BIV9 151 aa2.29□□□□□ -2.04
CCDC50-203ENST00000460064 FAM27BQ5VT28 67 aa2.29□□□□□ -2.04
CCDC50-203ENST00000460064 UNQ5815/PRO19632Q6UWF5 114 aa2.29□□□□□ -2.04
CCDC50-203ENST00000460064 ATP11AUNQ6ZP68 121 aa2.29□□□□□ -2.04
CCDC50-203ENST00000460064 Q9BRP9 147 aa2.29□□□□□ -2.04
CCDC50-203ENST00000460064 DPH3P1Q9H4G8 78 aa2.29□□□□□ -2.04
CCDC50-203ENST00000460064 ZFC3H1O60293 1989 aaKnown RBP2.29□□□□□ -2.04
CCDC50-203ENST00000460064 HELZP42694 1942 aaKnown RBP2.29□□□□□ -2.04
CCDC50-203ENST00000460064 PLXNA3P51805 1871 aa2.28□□□□□ -2.04
CCDC50-203ENST00000460064 SPHKAPQ2M3C7 1700 aa2.28□□□□□ -2.04
CCDC50-203ENST00000460064 KIF21AQ7Z4S6 1674 aa2.28□□□□□ -2.04
CCDC50-203ENST00000460064 ARHGAP5Q13017 1502 aa2.28□□□□□ -2.04
CCDC50-203ENST00000460064 TRBV10-2A0A0K0K1G8 114 aa2.28□□□□□ -2.04
CCDC50-203ENST00000460064 FAM24AA6NFZ4 105 aa2.28□□□□□ -2.04
CCDC50-203ENST00000460064 LYRM1O43325 122 aa2.28□□□□□ -2.04
CCDC50-203ENST00000460064 FXYD2P54710 66 aa2.28□□□□□ -2.04
CCDC50-203ENST00000460064 ROMO1P60602 79 aa2.28□□□□□ -2.04
CCDC50-203ENST00000460064 DEFB103AP81534 67 aa2.28□□□□□ -2.04
CCDC50-203ENST00000460064 NNATQ16517 81 aa2.28□□□□□ -2.04
CCDC50-203ENST00000460064 ESRGQ1W209 222 aa2.28□□□□□ -2.04
CCDC50-203ENST00000460064 TDRG1Q3Y452 100 aa2.28□□□□□ -2.04
CCDC50-203ENST00000460064 Q6ZS52 159 aa2.28□□□□□ -2.04
CCDC50-203ENST00000460064 SBSPONQ8IVN8 264 aa2.28□□□□□ -2.04
CCDC50-203ENST00000460064 OR2T35Q8NGX2 323 aa2.28□□□□□ -2.04
CCDC50-203ENST00000460064 ATP6V0E2Q8NHE4 81 aa2.28□□□□□ -2.04
CCDC50-203ENST00000460064 PSMF1Q92530 271 aa2.28□□□□□ -2.04
CCDC50-203ENST00000460064 AP4S1Q9Y587 144 aa2.28□□□□□ -2.04
CCDC50-203ENST00000460064 STRCP1A6NGW2 1772 aa2.28□□□□□ -2.04
CCDC50-203ENST00000460064 RBBP6Q7Z6E9 1792 aaKnown RBP2.28□□□□□ -2.04
CCDC50-203ENST00000460064 KDM6BO15054 1643 aa2.28□□□□□ -2.05
CCDC50-203ENST00000460064 ADGRB3O60242 1522 aa2.27□□□□□ -2.05
CCDC50-203ENST00000460064 ABCC5O15440 1437 aa2.27□□□□□ -2.05
CCDC50-203ENST00000460064 RIC1Q4ADV7 1423 aa2.27□□□□□ -2.05
CCDC50-203ENST00000460064 CASKIN1Q8WXD9 1431 aa2.27□□□□□ -2.05
CCDC50-203ENST00000460064 IGHV1-24A0A0C4DH33 117 aa2.27□□□□□ -2.05
CCDC50-203ENST00000460064 H3BRN7 92 aa2.27□□□□□ -2.05
CCDC50-203ENST00000460064 H7C2G1 150 aa2.27□□□□□ -2.05
CCDC50-203ENST00000460064 COX7CP15954 63 aa2.27□□□□□ -2.05
CCDC50-203ENST00000460064 DCDP81605 110 aaKnown RBP2.27□□□□□ -2.05
CCDC50-203ENST00000460064 C1orf134Q5TEV5 83 aa2.27□□□□□ -2.05
CCDC50-203ENST00000460064 ZNF720Q7Z2F6 126 aa2.27□□□□□ -2.05
CCDC50-203ENST00000460064 FAM19A2Q8N3H0 131 aa2.27□□□□□ -2.05
CCDC50-203ENST00000460064 Q8N8P6 123 aa2.27□□□□□ -2.05
CCDC50-203ENST00000460064 VSTM2AQ8TAG5 236 aa2.27□□□□□ -2.05
CCDC50-203ENST00000460064 C10orf82Q8WW14 230 aa2.27□□□□□ -2.05
CCDC50-203ENST00000460064 LINC00467Q9BRT7 94 aa2.27□□□□□ -2.05
CCDC50-203ENST00000460064 REG4Q9BYZ8 158 aa2.27□□□□□ -2.05
CCDC50-203ENST00000460064 CST11Q9H112 138 aa2.27□□□□□ -2.05
CCDC50-203ENST00000460064 NDUFB11Q9NX14 153 aa2.27□□□□□ -2.05
CCDC50-203ENST00000460064 TIMM9Q9Y5J7 89 aa2.27□□□□□ -2.05
CCDC50-203ENST00000460064 NYNRINQ9P2P1 1898 aaKnown RBP2.26□□□□□ -2.05
CCDC50-203ENST00000460064 hDV103S1A0JD37 113 aa2.26□□□□□ -2.05
CCDC50-203ENST00000460064 K7EP34 96 aa2.26□□□□□ -2.05
CCDC50-203ENST00000460064 IL5P05113 134 aa2.26□□□□□ -2.05
CCDC50-203ENST00000460064 NMBP08949 121 aa2.26□□□□□ -2.05
CCDC50-203ENST00000460064 SNCAP37840 140 aa2.26□□□□□ -2.05
CCDC50-203ENST00000460064 INSL4Q14641 139 aa2.26□□□□□ -2.05
CCDC50-203ENST00000460064 Q5BKY6 102 aa2.26□□□□□ -2.05
CCDC50-203ENST00000460064 SLC50A1Q9BRV3 221 aa2.26□□□□□ -2.05
CCDC50-203ENST00000460064 TMEM242Q9NWH2 141 aa2.26□□□□□ -2.05
CCDC50-203ENST00000460064 NHP2Q9NX24 153 aaKnown RBP2.26□□□□□ -2.05
CCDC50-203ENST00000460064 LY96Q9Y6Y9 160 aa2.26□□□□□ -2.05
CCDC50-203ENST00000460064 PTPRBP23467 1997 aa2.26□□□□□ -2.05
CCDC50-203ENST00000460064 PTPRSQ13332 1948 aa2.26□□□□□ -2.05
CCDC50-203ENST00000460064 FYCO1Q9BQS8 1478 aa2.26□□□□□ -2.05
CCDC50-203ENST00000460064 RTEL1-TNFRSF6BF6WH68 1400 aa2.25□□□□□ -2.05
CCDC50-203ENST00000460064 WDR90Q96KV7 1748 aa2.25□□□□□ -2.05
CCDC50-203ENST00000460064 HEATR5AQ86XA9 2040 aa2.25□□□□□ -2.05
CCDC50-203ENST00000460064 ROBO1Q9Y6N7 1651 aa2.25□□□□□ -2.05
CCDC50-203ENST00000460064 IGKV1D-42A0A075B6H8 117 aa2.25□□□□□ -2.05
CCDC50-203ENST00000460064 LOC107984156A0A0G2JMH3 177 aa2.25□□□□□ -2.05
CCDC50-203ENST00000460064 A0A0G2JQZ4 141 aa2.25□□□□□ -2.05
CCDC50-203ENST00000460064 J3QLW9 94 aa2.25□□□□□ -2.05
CCDC50-203ENST00000460064 SNCGO76070 127 aa2.25□□□□□ -2.05
CCDC50-203ENST00000460064 PROSCO94903 275 aa2.25□□□□□ -2.05
CCDC50-203ENST00000460064 KRTAP12-4P60329 112 aa2.25□□□□□ -2.05
CCDC50-203ENST00000460064 PEA15Q15121 130 aa2.25□□□□□ -2.05
CCDC50-203ENST00000460064 ALKAL2Q6UX46 152 aa2.25□□□□□ -2.05
CCDC50-203ENST00000460064 ARL17AQ8IVW1 177 aa2.25□□□□□ -2.05
CCDC50-203ENST00000460064 LINC00269Q8N2A0 174 aa2.25□□□□□ -2.05
CCDC50-203ENST00000460064 TSKUQ8WUA8 353 aa2.25□□□□□ -2.05
CCDC50-203ENST00000460064 Q96M85 177 aa2.25□□□□□ -2.05
CCDC50-203ENST00000460064 GAPVD1Q14C86 1478 aa2.25□□□□□ -2.05
CCDC50-203ENST00000460064 CCDC141Q6ZP82 1450 aa2.25□□□□□ -2.05
CCDC50-203ENST00000460064 PLEKHH2Q8IVE3 1493 aa2.25□□□□□ -2.05
CCDC50-203ENST00000460064 MCM3APO60318 1980 aa2.25□□□□□ -2.05
CCDC50-203ENST00000460064 VWDEQ8N2E2 1590 aa2.24□□□□□ -2.05
CCDC50-203ENST00000460064 TRAV14DV4A0A0A6YYC5 116 aa2.24□□□□□ -2.05
CCDC50-203ENST00000460064 IGHV1-18A0A0C4DH31 117 aa2.24□□□□□ -2.05
CCDC50-203ENST00000460064 ZNF705FA8MVS1 300 aaPredicted RBP2.24□□□□□ -2.05
CCDC50-203ENST00000460064 C5orf67F2Z3F1 127 aa2.24□□□□□ -2.05
CCDC50-203ENST00000460064 C17orf112F2Z3M2 114 aa2.24□□□□□ -2.05
CCDC50-203ENST00000460064 M0R233 179 aa2.24□□□□□ -2.05
CCDC50-203ENST00000460064 GNGT2O14610 69 aa2.24□□□□□ -2.05
CCDC50-203ENST00000460064 SSSCA1O60232 199 aa2.24□□□□□ -2.05
CCDC50-203ENST00000460064 CRPP02741 224 aa2.24□□□□□ -2.05
CCDC50-203ENST00000460064 PIRTP0C851 137 aa2.24□□□□□ -2.05
CCDC50-203ENST00000460064 TRAPPC2P0DI81 140 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms