RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 TRAV1-1A0A0B4J248 108 aa15.39■□□□□ 0.05
SSNA1-202ENST00000459860 F5H768 121 aa15.39■□□□□ 0.05
SSNA1-202ENST00000459860 TMEM183BQ1AE95 376 aa15.39■□□□□ 0.05
SSNA1-202ENST00000459860 TMEM183AQ8IXX5 376 aa15.39■□□□□ 0.05
SSNA1-202ENST00000459860 SDF2L1Q9HCN8 221 aa15.39■□□□□ 0.05
SSNA1-202ENST00000459860 GNG13Q9P2W3 67 aa15.39■□□□□ 0.05
SSNA1-202ENST00000459860 TRGV1A0A0A0MS02 117 aa15.38■□□□□ 0.05
SSNA1-202ENST00000459860 PFN1P07737 140 aaKnown RBP15.38■□□□□ 0.05
SSNA1-202ENST00000459860 NKX2-5P52952 324 aaPredicted RBP15.38■□□□□ 0.05
SSNA1-202ENST00000459860 TDRG1Q3Y452 100 aa15.38■□□□□ 0.05
SSNA1-202ENST00000459860 LINC00612Q8N6U2 182 aa15.38■□□□□ 0.05
SSNA1-202ENST00000459860 KLF12Q9Y4X4 402 aa15.38■□□□□ 0.05
SSNA1-202ENST00000459860 TRGV2A0A075B6R0 118 aa15.37■□□□□ 0.05
SSNA1-202ENST00000459860 IFNA1P01562 189 aa15.37■□□□□ 0.05
SSNA1-202ENST00000459860 LGALS9CQ6DKI2 356 aa15.37■□□□□ 0.05
SSNA1-202ENST00000459860 Q6ZTI0 123 aa15.37■□□□□ 0.05
SSNA1-202ENST00000459860 ZFP30Q9Y2G7 519 aa15.37■□□□□ 0.05
SSNA1-202ENST00000459860 SPINK4O60575 86 aa15.36■□□□□ 0.05
SSNA1-202ENST00000459860 TMEM88Q6PEY1 159 aa15.36■□□□□ 0.05
SSNA1-202ENST00000459860 S100A9P06702 114 aaKnown RBP15.35■□□□□ 0.05
SSNA1-202ENST00000459860 ZNF80P51504 273 aaPredicted RBP15.35■□□□□ 0.05
SSNA1-202ENST00000459860 LGALS9BQ3B8N2 356 aa15.35■□□□□ 0.05
SSNA1-202ENST00000459860 SPXQ9BT56 116 aa15.35■□□□□ 0.05
SSNA1-202ENST00000459860 TRBV6-1A0A0K0K1D8 114 aa15.34■□□□□ 0.05
SSNA1-202ENST00000459860 CCL20P78556 96 aa15.34■□□□□ 0.05
SSNA1-202ENST00000459860 ALKAL2Q6UX46 152 aa15.34■□□□□ 0.05
SSNA1-202ENST00000459860 C15orf53Q8NAA6 179 aa15.34■□□□□ 0.05
SSNA1-202ENST00000459860 TXNDC17Q9BRA2 123 aa15.34■□□□□ 0.05
SSNA1-202ENST00000459860 MRPL16Q9NX20 251 aaKnown RBP15.34■□□□□ 0.05
SSNA1-202ENST00000459860 MDFICQ9P1T7 246 aa15.34■□□□□ 0.05
SSNA1-202ENST00000459860 DNAH10Q8IVF4 4471 aa15.34■□□□□ 0.05
SSNA1-202ENST00000459860 SCO2A0A1W2PP80 73 aa15.33■□□□□ 0.04
SSNA1-202ENST00000459860 TYMSP04818 313 aa15.33■□□□□ 0.04
SSNA1-202ENST00000459860 HERC2O95714 4834 aa15.33■□□□□ 0.04
SSNA1-202ENST00000459860 FABP5P3A8MUU1 101 aa15.32■□□□□ 0.04
SSNA1-202ENST00000459860 OR5I1Q13606 314 aa15.32■□□□□ 0.04
SSNA1-202ENST00000459860 C18orf15Q96N68 181 aa15.32■□□□□ 0.04
SSNA1-202ENST00000459860 IGHV3-16A0A0C4DH30 117 aa15.31■□□□□ 0.04
SSNA1-202ENST00000459860 GNRH2O43555 120 aa15.31■□□□□ 0.04
SSNA1-202ENST00000459860 LTAP01374 205 aa15.31■□□□□ 0.04
SSNA1-202ENST00000459860 P0DMU3 169 aa15.31■□□□□ 0.04
SSNA1-202ENST00000459860 FAM231AP0DMU4 169 aa15.31■□□□□ 0.04
SSNA1-202ENST00000459860 FAM231CP0DMU5 169 aa15.31■□□□□ 0.04
SSNA1-202ENST00000459860 BLOC1S1P78537 153 aa15.31■□□□□ 0.04
SSNA1-202ENST00000459860 KRTAP17-1Q9BYP8 105 aa15.31■□□□□ 0.04
SSNA1-202ENST00000459860 ZC2HC1AQ96GY0 325 aa15.3■□□□□ 0.04
SSNA1-202ENST00000459860 TAGLN2P37802 199 aaKnown RBP15.29■□□□□ 0.04
SSNA1-202ENST00000459860 MEF2BQ02080 365 aaPredicted RBP15.29■□□□□ 0.04
SSNA1-202ENST00000459860 COX8CQ7Z4L0 72 aa15.29■□□□□ 0.04
SSNA1-202ENST00000459860 C11orf21Q9P2W6 132 aa15.29■□□□□ 0.04
SSNA1-202ENST00000459860 BOLA1Q9Y3E2 137 aa15.29■□□□□ 0.04
SSNA1-202ENST00000459860 M0R2P5 195 aa15.28■□□□□ 0.04
SSNA1-202ENST00000459860 BCL2P10415 239 aa15.28■□□□□ 0.04
SSNA1-202ENST00000459860 FAM162BQ5T6X4 162 aa15.28■□□□□ 0.04
SSNA1-202ENST00000459860 UBE2DNLQ8IWF7 75 aa15.28■□□□□ 0.04
SSNA1-202ENST00000459860 PDE6DO43924 150 aa15.27■□□□□ 0.04
SSNA1-202ENST00000459860 NUDT3O95989 172 aa15.27■□□□□ 0.04
SSNA1-202ENST00000459860 ORM1P02763 201 aa15.27■□□□□ 0.04
SSNA1-202ENST00000459860 S100A4P26447 101 aaKnown RBP15.27■□□□□ 0.04
SSNA1-202ENST00000459860 C11orf52Q96A22 123 aa15.27■□□□□ 0.04
SSNA1-202ENST00000459860 VAX2Q9UIW0 290 aa15.27■□□□□ 0.04
SSNA1-202ENST00000459860 TRAV26-1A0A087WT03 109 aa15.26■□□□□ 0.03
SSNA1-202ENST00000459860 B4DEV8 164 aa15.26■□□□□ 0.03
SSNA1-202ENST00000459860 SH2D1AO60880 128 aa15.26■□□□□ 0.03
SSNA1-202ENST00000459860 HOXA5P20719 270 aa15.26■□□□□ 0.03
SSNA1-202ENST00000459860 BAGE2Q86Y30 109 aa15.26■□□□□ 0.03
SSNA1-202ENST00000459860 NHLRC2Q8NBF2 726 aa15.26■□□□□ 0.03
SSNA1-202ENST00000459860 RASL10AQ92737 203 aa15.26■□□□□ 0.03
SSNA1-202ENST00000459860 IGHV3-53P01767 116 aa15.25■□□□□ 0.03
SSNA1-202ENST00000459860 ASIPP42127 132 aa15.25■□□□□ 0.03
SSNA1-202ENST00000459860 RPL35P42766 123 aaKnown RBP15.25■□□□□ 0.03
SSNA1-202ENST00000459860 A0A0J9YY99 117 aa15.24■□□□□ 0.03
SSNA1-202ENST00000459860 ZNF674Q2M3X9 581 aa15.24■□□□□ 0.03
SSNA1-202ENST00000459860 IGKV3D-20A0A0C4DH25 116 aa15.23■□□□□ 0.03
SSNA1-202ENST00000459860 M0R036 132 aa15.23■□□□□ 0.03
SSNA1-202ENST00000459860 SLAQ13239 276 aa15.23■□□□□ 0.03
SSNA1-202ENST00000459860 VPS13DQ5THJ4 4388 aa15.23■□□□□ 0.03
SSNA1-202ENST00000459860 MUC4Q99102 2169 aa15.22■□□□□ 0.03
SSNA1-202ENST00000459860 TRGV4A0A0C4DH28 118 aa15.22■□□□□ 0.03
SSNA1-202ENST00000459860 H3BNG1 76 aa15.22■□□□□ 0.03
SSNA1-202ENST00000459860 CRIP1P50238 77 aa15.22■□□□□ 0.03
SSNA1-202ENST00000459860 ZNF876PQ49A33 203 aa15.22■□□□□ 0.03
SSNA1-202ENST00000459860 POM121L12Q8N7R1 296 aa15.22■□□□□ 0.03
SSNA1-202ENST00000459860 C9orf85Q96MD7 179 aa15.22■□□□□ 0.03
SSNA1-202ENST00000459860 MED9Q9NWA0 146 aa15.22■□□□□ 0.03
SSNA1-202ENST00000459860 HECTD4Q9Y4D8 3996 aa15.22■□□□□ 0.03
SSNA1-202ENST00000459860 TRAV4A0A0B4J268 109 aa15.21■□□□□ 0.03
SSNA1-202ENST00000459860 C9JCJ5 164 aa15.21■□□□□ 0.03
SSNA1-202ENST00000459860 RNF212Q495C1 297 aa15.21■□□□□ 0.03
SSNA1-202ENST00000459860 OR4C5Q8NGB2 326 aa15.21■□□□□ 0.03
SSNA1-202ENST00000459860 DERL1Q9BUN8 251 aa15.21■□□□□ 0.03
SSNA1-202ENST00000459860 KRBOX1C9JBD0 128 aa15.2■□□□□ 0.02
SSNA1-202ENST00000459860 LINC01559Q495D7 138 aa15.2■□□□□ 0.02
SSNA1-202ENST00000459860 CENPWQ5EE01 88 aa15.2■□□□□ 0.02
SSNA1-202ENST00000459860 PRR27Q6MZM9 219 aa15.2■□□□□ 0.02
SSNA1-202ENST00000459860 MLST8Q9BVC4 326 aa15.2■□□□□ 0.02
SSNA1-202ENST00000459860 PRO0255Q9UI72 69 aa15.2■□□□□ 0.02
SSNA1-202ENST00000459860 PAX4O43316 350 aa15.19■□□□□ 0.02
SSNA1-202ENST00000459860 SFTA3P0C7M3 94 aa15.19■□□□□ 0.02
SSNA1-202ENST00000459860 RNASE3P12724 160 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms