RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 IGHV3-53P01767 116 aa12.67□□□□□ -0.38
PDLIM2-215ENST00000456545 HOXA5P20719 270 aa12.67□□□□□ -0.38
PDLIM2-215ENST00000456545 CCL18P55774 89 aa12.67□□□□□ -0.38
PDLIM2-215ENST00000456545 EIF5AL1Q6IS14 154 aaKnown RBP12.67□□□□□ -0.38
PDLIM2-215ENST00000456545 DPPA3Q6W0C5 159 aa12.67□□□□□ -0.38
PDLIM2-215ENST00000456545 TCTE3Q8IZS6 198 aa12.67□□□□□ -0.38
PDLIM2-215ENST00000456545 M0R2N4 97 aa12.66□□□□□ -0.38
PDLIM2-215ENST00000456545 TDRG1Q3Y452 100 aa12.66□□□□□ -0.38
PDLIM2-215ENST00000456545 LINC00479Q96M42 142 aa12.66□□□□□ -0.38
PDLIM2-215ENST00000456545 C18orf15Q96N68 181 aa12.66□□□□□ -0.38
PDLIM2-215ENST00000456545 IGLV2-18A0A075B6J9 118 aa12.65□□□□□ -0.38
PDLIM2-215ENST00000456545 IGLV2-11P01706 119 aa12.65□□□□□ -0.38
PDLIM2-215ENST00000456545 H2AFB1P0C5Y9 115 aa12.65□□□□□ -0.38
PDLIM2-215ENST00000456545 UBE2G1P62253 170 aa12.65□□□□□ -0.38
PDLIM2-215ENST00000456545 MBD3L1Q8WWY6 194 aa12.65□□□□□ -0.38
PDLIM2-215ENST00000456545 PAGE4O60829 102 aa12.64□□□□□ -0.39
PDLIM2-215ENST00000456545 PFN1P07737 140 aaKnown RBP12.64□□□□□ -0.39
PDLIM2-215ENST00000456545 ZNF80P51504 273 aaPredicted RBP12.64□□□□□ -0.39
PDLIM2-215ENST00000456545 FAM3BP58499 235 aaPredicted RBP12.64□□□□□ -0.39
PDLIM2-215ENST00000456545 LGALSLQ3ZCW2 172 aaPredicted RBP12.64□□□□□ -0.39
PDLIM2-215ENST00000456545 AKAP14Q86UN6 197 aa12.64□□□□□ -0.39
PDLIM2-215ENST00000456545 ARL2-SNX15V9GYD0 113 aa12.64□□□□□ -0.39
PDLIM2-215ENST00000456545 TRGV4A0A0C4DH28 118 aa12.63□□□□□ -0.39
PDLIM2-215ENST00000456545 IGHV3-16A0A0C4DH30 117 aa12.63□□□□□ -0.39
PDLIM2-215ENST00000456545 H3BNG1 76 aa12.63□□□□□ -0.39
PDLIM2-215ENST00000456545 C1QBP02746 253 aa12.63□□□□□ -0.39
PDLIM2-215ENST00000456545 TYMSP04818 313 aa12.63□□□□□ -0.39
PDLIM2-215ENST00000456545 SLAQ13239 276 aa12.63□□□□□ -0.39
PDLIM2-215ENST00000456545 FABP5P3A8MUU1 101 aa12.62□□□□□ -0.39
PDLIM2-215ENST00000456545 TEX46H3BTG2 121 aa12.62□□□□□ -0.39
PDLIM2-215ENST00000456545 M0R2P5 195 aa12.62□□□□□ -0.39
PDLIM2-215ENST00000456545 PAX4O43316 350 aa12.62□□□□□ -0.39
PDLIM2-215ENST00000456545 FMC1Q96HJ9 113 aa12.62□□□□□ -0.39
PDLIM2-215ENST00000456545 TCEAL7Q9BRU2 100 aa12.62□□□□□ -0.39
PDLIM2-215ENST00000456545 AKR1C3P42330 323 aa12.61□□□□□ -0.39
PDLIM2-215ENST00000456545 RAB5CP51148 216 aa12.61□□□□□ -0.39
PDLIM2-215ENST00000456545 RASL10AQ92737 203 aa12.61□□□□□ -0.39
PDLIM2-215ENST00000456545 PRO0255Q9UI72 69 aa12.61□□□□□ -0.39
PDLIM2-215ENST00000456545 HHLA3Q9XRX5 114 aa12.61□□□□□ -0.39
PDLIM2-215ENST00000456545 ZFP30Q9Y2G7 519 aa12.61□□□□□ -0.39
PDLIM2-215ENST00000456545 C9JCJ5 164 aa12.6□□□□□ -0.39
PDLIM2-215ENST00000456545 Q86TA4 180 aa12.6□□□□□ -0.39
PDLIM2-215ENST00000456545 OR4C5Q8NGB2 326 aa12.6□□□□□ -0.39
PDLIM2-215ENST00000456545 ORM1P02763 201 aa12.59□□□□□ -0.39
PDLIM2-215ENST00000456545 SFTA3P0C7M3 94 aa12.59□□□□□ -0.39
PDLIM2-215ENST00000456545 S100A4P26447 101 aaKnown RBP12.59□□□□□ -0.39
PDLIM2-215ENST00000456545 SLC51BQ86UW2 128 aa12.59□□□□□ -0.39
PDLIM2-215ENST00000456545 C11orf21Q9P2W6 132 aa12.59□□□□□ -0.39
PDLIM2-215ENST00000456545 LINC00588Q9Y4M8 146 aa12.59□□□□□ -0.39
PDLIM2-215ENST00000456545 S100A9P06702 114 aaKnown RBP12.58□□□□□ -0.4
PDLIM2-215ENST00000456545 FHL2Q14192 279 aa12.58□□□□□ -0.4
PDLIM2-215ENST00000456545 VSIG2Q96IQ7 327 aa12.58□□□□□ -0.4
PDLIM2-215ENST00000456545 ZNF479Q96JC4 524 aa12.58□□□□□ -0.4
PDLIM2-215ENST00000456545 ICOSQ9Y6W8 199 aa12.58□□□□□ -0.4
PDLIM2-215ENST00000456545 VPS13DQ5THJ4 4388 aa12.58□□□□□ -0.4
PDLIM2-215ENST00000456545 NACAE9PAV3 2078 aa12.57□□□□□ -0.4
PDLIM2-215ENST00000456545 TRAV4A0A0B4J268 109 aa12.57□□□□□ -0.4
PDLIM2-215ENST00000456545 CRYBA4P53673 196 aa12.57□□□□□ -0.4
PDLIM2-215ENST00000456545 ZNF876PQ49A33 203 aa12.57□□□□□ -0.4
PDLIM2-215ENST00000456545 PCNPQ8WW12 178 aaKnown RBP12.57□□□□□ -0.4
PDLIM2-215ENST00000456545 GNG13Q9P2W3 67 aa12.57□□□□□ -0.4
PDLIM2-215ENST00000456545 MUC4Q99102 2169 aa12.56□□□□□ -0.4
PDLIM2-215ENST00000456545 A0A096LPF7 62 aa12.56□□□□□ -0.4
PDLIM2-215ENST00000456545 SULT1A2P50226 295 aa12.56□□□□□ -0.4
PDLIM2-215ENST00000456545 ESRGQ1W209 222 aa12.56□□□□□ -0.4
PDLIM2-215ENST00000456545 SOHLH1Q5JUK2 328 aa12.56□□□□□ -0.4
PDLIM2-215ENST00000456545 MANBALQ9NQG1 85 aa12.56□□□□□ -0.4
PDLIM2-215ENST00000456545 KMT2AQ03164 3969 aa12.55□□□□□ -0.4
PDLIM2-215ENST00000456545 TRBV6-1A0A0K0K1D8 114 aa12.55□□□□□ -0.4
PDLIM2-215ENST00000456545 B4DEV8 164 aa12.55□□□□□ -0.4
PDLIM2-215ENST00000456545 ASIPP42127 132 aa12.55□□□□□ -0.4
PDLIM2-215ENST00000456545 MRPL23Q16540 153 aaKnown RBP12.55□□□□□ -0.4
PDLIM2-215ENST00000456545 FAM162BQ5T6X4 162 aa12.55□□□□□ -0.4
PDLIM2-215ENST00000456545 ZC2HC1AQ96GY0 325 aa12.55□□□□□ -0.4
PDLIM2-215ENST00000456545 SCO2A0A1W2PP80 73 aa12.54□□□□□ -0.4
PDLIM2-215ENST00000456545 M0R036 132 aa12.54□□□□□ -0.4
PDLIM2-215ENST00000456545 LINC00336Q6ZUF6 198 aa12.54□□□□□ -0.4
PDLIM2-215ENST00000456545 ZNRF2Q8NHG8 242 aa12.54□□□□□ -0.4
PDLIM2-215ENST00000456545 Q9H8V8 135 aa12.54□□□□□ -0.4
PDLIM2-215ENST00000456545 TRAV1-1A0A0B4J248 108 aa12.53□□□□□ -0.4
PDLIM2-215ENST00000456545 IGKV3D-20A0A0C4DH25 116 aa12.53□□□□□ -0.4
PDLIM2-215ENST00000456545 SH2D1AO60880 128 aa12.53□□□□□ -0.4
PDLIM2-215ENST00000456545 LTAP01374 205 aa12.53□□□□□ -0.4
PDLIM2-215ENST00000456545 CCL20P78556 96 aa12.53□□□□□ -0.4
PDLIM2-215ENST00000456545 C1orf134Q5TEV5 83 aa12.53□□□□□ -0.4
PDLIM2-215ENST00000456545 C9orf85Q96MD7 179 aa12.53□□□□□ -0.4
PDLIM2-215ENST00000456545 NBDYA0A0U1RRE5 68 aa12.52□□□□□ -0.41
PDLIM2-215ENST00000456545 IFNA1P01562 189 aa12.52□□□□□ -0.41
PDLIM2-215ENST00000456545 GYPEP15421 78 aa12.52□□□□□ -0.41
PDLIM2-215ENST00000456545 SRIP30626 198 aa12.52□□□□□ -0.41
PDLIM2-215ENST00000456545 CRIP1P50238 77 aa12.52□□□□□ -0.41
PDLIM2-215ENST00000456545 Q6ZR54 194 aa12.52□□□□□ -0.41
PDLIM2-215ENST00000456545 BAGE2Q86Y30 109 aa12.52□□□□□ -0.41
PDLIM2-215ENST00000456545 NHLRC2Q8NBF2 726 aa12.52□□□□□ -0.41
PDLIM2-215ENST00000456545 MRPS16Q9Y3D3 137 aaKnown RBP12.52□□□□□ -0.41
PDLIM2-215ENST00000456545 PGPEP1LA6NFU8 196 aa12.51□□□□□ -0.41
PDLIM2-215ENST00000456545 CIDEAO60543 219 aa12.51□□□□□ -0.41
PDLIM2-215ENST00000456545 RNASE3P12724 160 aaKnown RBP12.51□□□□□ -0.41
PDLIM2-215ENST00000456545 NEGR1Q7Z3B1 354 aa12.51□□□□□ -0.41
PDLIM2-215ENST00000456545 COX8CQ7Z4L0 72 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms