RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 FAM159AQ6UWV7 190 aa12.01□□□□□ -0.49
CCDC90B-202ENST00000455220 ZNF575Q86XF7 245 aa12.01□□□□□ -0.49
CCDC90B-202ENST00000455220 NEU1Q99519 415 aa12.01□□□□□ -0.49
CCDC90B-202ENST00000455220 IGHV3OR16-12A0A075B7B8 117 aa12.01□□□□□ -0.49
CCDC90B-202ENST00000455220 APOC3P02656 99 aa12.01□□□□□ -0.49
CCDC90B-202ENST00000455220 ORM1P02763 201 aa12.01□□□□□ -0.49
CCDC90B-202ENST00000455220 KCNS1Q96KK3 526 aa12.01□□□□□ -0.49
CCDC90B-202ENST00000455220 B9D2Q9BPU9 175 aa12.01□□□□□ -0.49
CCDC90B-202ENST00000455220 TM2D3Q9BRN9 247 aa12.01□□□□□ -0.49
CCDC90B-202ENST00000455220 OVOL2Q9BRP0 275 aa12.01□□□□□ -0.49
CCDC90B-202ENST00000455220 NAGKQ9UJ70 344 aa12.01□□□□□ -0.49
CCDC90B-202ENST00000455220 X6R8D5 127 aa12.01□□□□□ -0.49
CCDC90B-202ENST00000455220 B4DEV8 164 aa12□□□□□ -0.49
CCDC90B-202ENST00000455220 M0R036 132 aa12□□□□□ -0.49
CCDC90B-202ENST00000455220 SPRY2O43597 315 aa12□□□□□ -0.49
CCDC90B-202ENST00000455220 RPP21Q9H633 154 aaKnown RBP12□□□□□ -0.49
CCDC90B-202ENST00000455220 TMEM189A5PLL7 270 aa11.99□□□□□ -0.49
CCDC90B-202ENST00000455220 CXCL1P09341 107 aa11.99□□□□□ -0.49
CCDC90B-202ENST00000455220 RPL19P84098 196 aaKnown RBP11.99□□□□□ -0.49
CCDC90B-202ENST00000455220 CT83Q5H943 113 aa11.99□□□□□ -0.49
CCDC90B-202ENST00000455220 SVBPQ8N300 66 aa11.99□□□□□ -0.49
CCDC90B-202ENST00000455220 C15orf54Q8N8G6 183 aa11.99□□□□□ -0.49
CCDC90B-202ENST00000455220 CLRN3Q8NCR9 226 aa11.99□□□□□ -0.49
CCDC90B-202ENST00000455220 OR10G8Q8NGN5 311 aa11.99□□□□□ -0.49
CCDC90B-202ENST00000455220 V9GYV3 84 aa11.99□□□□□ -0.49
CCDC90B-202ENST00000455220 SMIM9A6NGZ8 99 aa11.98□□□□□ -0.49
CCDC90B-202ENST00000455220 GATCO43716 136 aaKnown RBP11.98□□□□□ -0.49
CCDC90B-202ENST00000455220 PRM2P04554 102 aa11.98□□□□□ -0.49
CCDC90B-202ENST00000455220 TYMSP04818 313 aa11.98□□□□□ -0.49
CCDC90B-202ENST00000455220 OR2D3Q8NGH3 330 aa11.98□□□□□ -0.49
CCDC90B-202ENST00000455220 OR11H2Q8NH07 326 aa11.98□□□□□ -0.49
CCDC90B-202ENST00000455220 SPATA25Q9BR10 227 aa11.98□□□□□ -0.49
CCDC90B-202ENST00000455220 TP53TG3Q9ULZ0 132 aa11.98□□□□□ -0.49
CCDC90B-202ENST00000455220 CBY3A6NI87 242 aa11.97□□□□□ -0.49
CCDC90B-202ENST00000455220 ZNF705GA8MUZ8 300 aaPredicted RBP11.97□□□□□ -0.49
CCDC90B-202ENST00000455220 RPS20P60866 119 aaKnown RBP11.97□□□□□ -0.49
CCDC90B-202ENST00000455220 RNF212Q495C1 297 aa11.97□□□□□ -0.49
CCDC90B-202ENST00000455220 DNLZQ5SXM8 178 aa11.97□□□□□ -0.49
CCDC90B-202ENST00000455220 RNASE8Q8TDE3 154 aaKnown RBP11.97□□□□□ -0.49
CCDC90B-202ENST00000455220 RETNQ9HD89 108 aa11.97□□□□□ -0.49
CCDC90B-202ENST00000455220 TRGV11A0A075B6L2 103 aa11.96□□□□□ -0.49
CCDC90B-202ENST00000455220 TMSB15BA0A087X1C1 80 aa11.96□□□□□ -0.49
CCDC90B-202ENST00000455220 PPP1R2P9O14990 202 aa11.96□□□□□ -0.49
CCDC90B-202ENST00000455220 GNRH2O43555 120 aa11.96□□□□□ -0.49
CCDC90B-202ENST00000455220 MT-ND4LP03901 98 aa11.96□□□□□ -0.49
CCDC90B-202ENST00000455220 HTN1P15515 57 aa11.96□□□□□ -0.49
CCDC90B-202ENST00000455220 AZU1P20160 251 aa11.96□□□□□ -0.49
CCDC90B-202ENST00000455220 RHEBQ15382 184 aa11.96□□□□□ -0.49
CCDC90B-202ENST00000455220 RRN3P1Q2M238 152 aa11.96□□□□□ -0.49
CCDC90B-202ENST00000455220 TMEM263Q8WUH6 116 aaKnown RBP11.96□□□□□ -0.49
CCDC90B-202ENST00000455220 ANAPC16Q96DE5 110 aa11.96□□□□□ -0.49
CCDC90B-202ENST00000455220 TENM3Q9P273 2699 aa11.96□□□□□ -0.5
CCDC90B-202ENST00000455220 IGHV3-16A0A0C4DH30 117 aa11.96□□□□□ -0.5
CCDC90B-202ENST00000455220 SNAPINO95295 136 aa11.96□□□□□ -0.5
CCDC90B-202ENST00000455220 MIFP14174 115 aa11.96□□□□□ -0.5
CCDC90B-202ENST00000455220 ZNF493Q6ZR52 646 aa11.96□□□□□ -0.5
CCDC90B-202ENST00000455220 C11orf72Q8NBR9 251 aa11.96□□□□□ -0.5
CCDC90B-202ENST00000455220 XKRY2A2RUG3 117 aa11.95□□□□□ -0.5
CCDC90B-202ENST00000455220 C7orf77A4D0Y5 90 aa11.95□□□□□ -0.5
CCDC90B-202ENST00000455220 GRIFINA4D1Z8 144 aa11.95□□□□□ -0.5
CCDC90B-202ENST00000455220 ATP6V1G1O75348 118 aa11.95□□□□□ -0.5
CCDC90B-202ENST00000455220 Q8NAQ8 132 aa11.95□□□□□ -0.5
CCDC90B-202ENST00000455220 C16orf74Q96GX8 76 aa11.95□□□□□ -0.5
CCDC90B-202ENST00000455220 PLAC8L1A1L4L8 177 aa11.94□□□□□ -0.5
CCDC90B-202ENST00000455220 A8MWL6 223 aa11.94□□□□□ -0.5
CCDC90B-202ENST00000455220 RNASE3P12724 160 aaKnown RBP11.94□□□□□ -0.5
CCDC90B-202ENST00000455220 ASIPP42127 132 aa11.94□□□□□ -0.5
CCDC90B-202ENST00000455220 IL17DQ8TAD2 202 aa11.94□□□□□ -0.5
CCDC90B-202ENST00000455220 TSKUQ8WUA8 353 aa11.94□□□□□ -0.5
CCDC90B-202ENST00000455220 MDFICQ9P1T7 246 aa11.94□□□□□ -0.5
CCDC90B-202ENST00000455220 A0A087WWC5 75 aa11.93□□□□□ -0.5
CCDC90B-202ENST00000455220 IGLC6P0CF74 106 aa11.93□□□□□ -0.5
CCDC90B-202ENST00000455220 MED14OSP0DP75 135 aa11.93□□□□□ -0.5
CCDC90B-202ENST00000455220 GZMBP10144 247 aa11.93□□□□□ -0.5
CCDC90B-202ENST00000455220 CTDSP1Q9GZU7 261 aa11.93□□□□□ -0.5
CCDC90B-202ENST00000455220 GFRA4Q9GZZ7 299 aa11.93□□□□□ -0.5
CCDC90B-202ENST00000455220 IL36BQ9NZH7 164 aa11.93□□□□□ -0.5
CCDC90B-202ENST00000455220 IGHV4-28A0A0C4DH34 117 aa11.92□□□□□ -0.5
CCDC90B-202ENST00000455220 FAM231BA6NCW3 169 aa11.92□□□□□ -0.5
CCDC90B-202ENST00000455220 FOXA3P55318 350 aaPredicted RBP11.92□□□□□ -0.5
CCDC90B-202ENST00000455220 TCL1AP56279 114 aa11.92□□□□□ -0.5
CCDC90B-202ENST00000455220 ZNF415Q09FC8 603 aa11.92□□□□□ -0.5
CCDC90B-202ENST00000455220 C9orf85Q96MD7 179 aa11.92□□□□□ -0.5
CCDC90B-202ENST00000455220 SSBP4Q9BWG4 385 aaPredicted RBP11.92□□□□□ -0.5
CCDC90B-202ENST00000455220 ZMAT4Q9H898 229 aa11.92□□□□□ -0.5
CCDC90B-202ENST00000455220 SCRT2Q9NQ03 307 aa11.92□□□□□ -0.5
CCDC90B-202ENST00000455220 TMEM242Q9NWH2 141 aa11.92□□□□□ -0.5
CCDC90B-202ENST00000455220 SNAI2O43623 268 aa11.92□□□□□ -0.5
CCDC90B-202ENST00000455220 S100A4P26447 101 aaKnown RBP11.92□□□□□ -0.5
CCDC90B-202ENST00000455220 GTSF1Q8WW33 167 aa11.92□□□□□ -0.5
CCDC90B-202ENST00000455220 GSN-AS1Q9NRJ2 163 aa11.92□□□□□ -0.5
CCDC90B-202ENST00000455220 A0A1W2PPQ1 181 aa11.91□□□□□ -0.5
CCDC90B-202ENST00000455220 SMIM27A0A1W2PRY6 76 aa11.91□□□□□ -0.5
CCDC90B-202ENST00000455220 H3BVH4 76 aa11.91□□□□□ -0.5
CCDC90B-202ENST00000455220 OR5AL1P0C617 328 aa11.91□□□□□ -0.5
CCDC90B-202ENST00000455220 ARMS2P0C7Q2 107 aa11.91□□□□□ -0.5
CCDC90B-202ENST00000455220 NHLRC4P0CG21 123 aaPredicted RBP11.91□□□□□ -0.5
CCDC90B-202ENST00000455220 S100A1P23297 94 aa11.91□□□□□ -0.5
CCDC90B-202ENST00000455220 FER1L6-AS1Q8NA97 138 aa11.91□□□□□ -0.5
CCDC90B-202ENST00000455220 RPS10P5Q9NQ39 176 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms