RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 H3BRN7 92 aa9.72□□□□□ -0.85
UBE3B-204ENST00000449510 F6UB75 175 aa9.72□□□□□ -0.85
UBE3B-204ENST00000449510 GATA4P43694 442 aa9.72□□□□□ -0.85
UBE3B-204ENST00000449510 ZFAND6Q6FIF0 208 aa9.72□□□□□ -0.85
UBE3B-204ENST00000449510 SPTBN4Q9H254 2564 aa9.71□□□□□ -0.85
UBE3B-204ENST00000449510 K7EIM0 57 aa9.71□□□□□ -0.85
UBE3B-204ENST00000449510 SEM1Q6ZVN7 128 aa9.71□□□□□ -0.85
UBE3B-204ENST00000449510 SMPXQ9UHP9 88 aa9.71□□□□□ -0.85
UBE3B-204ENST00000449510 LRP4O75096 1905 aa9.71□□□□□ -0.85
UBE3B-204ENST00000449510 DCHS1Q96JQ0 3298 aa9.71□□□□□ -0.85
UBE3B-204ENST00000449510 IGLV2-23P01705 113 aa9.71□□□□□ -0.85
UBE3B-204ENST00000449510 KALRNO60229 2985 aa9.71□□□□□ -0.86
UBE3B-204ENST00000449510 CRXO43186 299 aaPredicted RBP9.71□□□□□ -0.86
UBE3B-204ENST00000449510 PLNP26678 52 aa9.71□□□□□ -0.86
UBE3B-204ENST00000449510 LYPD1Q8N2G4 141 aa9.71□□□□□ -0.86
UBE3B-204ENST00000449510 MAPKAPK5-AS1Q8N8E1 139 aa9.71□□□□□ -0.86
UBE3B-204ENST00000449510 RPL39LQ96EH5 51 aaKnown RBP9.71□□□□□ -0.86
UBE3B-204ENST00000449510 COX6CP09669 75 aa9.7□□□□□ -0.86
UBE3B-204ENST00000449510 ODF1Q14990 250 aa9.7□□□□□ -0.86
UBE3B-204ENST00000449510 ORMDL2Q53FV1 153 aa9.7□□□□□ -0.86
UBE3B-204ENST00000449510 FN1P02751 2386 aaKnown RBP9.7□□□□□ -0.86
UBE3B-204ENST00000449510 MYMXA0A1B0GTQ4 84 aa9.7□□□□□ -0.86
UBE3B-204ENST00000449510 CRYBA4P53673 196 aa9.7□□□□□ -0.86
UBE3B-204ENST00000449510 AGPAT4-IT1Q9H0P7 198 aa9.7□□□□□ -0.86
UBE3B-204ENST00000449510 DMXL2Q8TDJ6 3036 aa9.7□□□□□ -0.86
UBE3B-204ENST00000449510 C10orf142B7Z368 130 aa9.7□□□□□ -0.86
UBE3B-204ENST00000449510 EEF1AKMT3Q96AZ1 226 aa9.7□□□□□ -0.86
UBE3B-204ENST00000449510 ZNF625Q96I27 306 aaPredicted RBP9.7□□□□□ -0.86
UBE3B-204ENST00000449510 SPXQ9BT56 116 aa9.7□□□□□ -0.86
UBE3B-204ENST00000449510 I3L2K1 104 aa9.69□□□□□ -0.86
UBE3B-204ENST00000449510 RRN3P1Q2M238 152 aa9.69□□□□□ -0.86
UBE3B-204ENST00000449510 Q8N8P6 123 aa9.69□□□□□ -0.86
UBE3B-204ENST00000449510 ERG28Q9UKR5 140 aa9.69□□□□□ -0.86
UBE3B-204ENST00000449510 PRSS29PA6NIE9 313 aa9.69□□□□□ -0.86
UBE3B-204ENST00000449510 CEACAM4O75871 244 aa9.69□□□□□ -0.86
UBE3B-204ENST00000449510 SUMO2P61956 95 aaKnown RBP9.69□□□□□ -0.86
UBE3B-204ENST00000449510 TSPAN13O95857 204 aa9.69□□□□□ -0.86
UBE3B-204ENST00000449510 ZFP2Q6ZN57 461 aa9.69□□□□□ -0.86
UBE3B-204ENST00000449510 MRAP2Q96G30 205 aa9.69□□□□□ -0.86
UBE3B-204ENST00000449510 F8VRH5 84 aa9.68□□□□□ -0.86
UBE3B-204ENST00000449510 ZNF883P0CG24 379 aa9.68□□□□□ -0.86
UBE3B-204ENST00000449510 RNASE13Q5GAN3 156 aaKnown RBP9.68□□□□□ -0.86
UBE3B-204ENST00000449510 TMEM14CQ9P0S9 112 aa9.68□□□□□ -0.86
UBE3B-204ENST00000449510 TP53TG1Q9Y2A0 90 aa9.68□□□□□ -0.86
UBE3B-204ENST00000449510 KLRB1Q12918 225 aa9.68□□□□□ -0.86
UBE3B-204ENST00000449510 BRD3OSQ6XYD6 125 aa9.68□□□□□ -0.86
UBE3B-204ENST00000449510 VMO1Q7Z5L0 202 aa9.68□□□□□ -0.86
UBE3B-204ENST00000449510 ADGRG4Q8IZF6 3080 aa9.68□□□□□ -0.86
UBE3B-204ENST00000449510 NCOR1P1Q9H4R4 102 aa9.68□□□□□ -0.86
UBE3B-204ENST00000449510 POLQO75417 2590 aa9.67□□□□□ -0.86
UBE3B-204ENST00000449510 GNRH2O43555 120 aa9.67□□□□□ -0.86
UBE3B-204ENST00000449510 FCN3O75636 299 aa9.67□□□□□ -0.86
UBE3B-204ENST00000449510 VCX2Q9H322 139 aa9.67□□□□□ -0.86
UBE3B-204ENST00000449510 SIVA1O15304 175 aa9.67□□□□□ -0.86
UBE3B-204ENST00000449510 ATMQ13315 3056 aa9.67□□□□□ -0.86
UBE3B-204ENST00000449510 PKD1L2Q7Z442 2459 aa9.67□□□□□ -0.86
UBE3B-204ENST00000449510 TEX22C9J3V5 150 aa9.67□□□□□ -0.86
UBE3B-204ENST00000449510 ZNF688P0C7X2 276 aa9.66□□□□□ -0.86
UBE3B-204ENST00000449510 TCF15Q12870 199 aa9.66□□□□□ -0.86
UBE3B-204ENST00000449510 PDE6HQ13956 83 aa9.66□□□□□ -0.86
UBE3B-204ENST00000449510 CR1LQ2VPA4 569 aa9.66□□□□□ -0.86
UBE3B-204ENST00000449510 SLC50A1Q9BRV3 221 aa9.66□□□□□ -0.86
UBE3B-204ENST00000449510 LOC400499M0QZD8 3231 aa9.66□□□□□ -0.86
UBE3B-204ENST00000449510 TACC2O95359 2948 aa9.66□□□□□ -0.86
UBE3B-204ENST00000449510 HIVEP3Q5T1R4 2406 aa9.66□□□□□ -0.86
UBE3B-204ENST00000449510 TRAV21A0A0B4J279 112 aa9.66□□□□□ -0.86
UBE3B-204ENST00000449510 RNASE1P07998 156 aaKnown RBP9.66□□□□□ -0.86
UBE3B-204ENST00000449510 EXPH5Q8NEV8 1989 aa9.66□□□□□ -0.86
UBE3B-204ENST00000449510 HIVEP2P31629 2446 aa9.66□□□□□ -0.86
UBE3B-204ENST00000449510 ATP6V0E1O15342 81 aa9.66□□□□□ -0.86
UBE3B-204ENST00000449510 MT-ATP8P03928 68 aa9.66□□□□□ -0.86
UBE3B-204ENST00000449510 GRNP28799 593 aaKnown RBP9.66□□□□□ -0.86
UBE3B-204ENST00000449510 Q6ZQT7 251 aa9.66□□□□□ -0.86
UBE3B-204ENST00000449510 SMIM2Q9BVW6 85 aa9.66□□□□□ -0.86
UBE3B-204ENST00000449510 A0A087WX48 190 aa9.65□□□□□ -0.86
UBE3B-204ENST00000449510 KNCNA6PVL3 124 aa9.65□□□□□ -0.86
UBE3B-204ENST00000449510 IGLV2-11P01706 119 aa9.65□□□□□ -0.86
UBE3B-204ENST00000449510 MYCNOSP40205 109 aa9.65□□□□□ -0.86
UBE3B-204ENST00000449510 PAX8Q06710 450 aa9.65□□□□□ -0.86
UBE3B-204ENST00000449510 ZNF876PQ49A33 203 aa9.65□□□□□ -0.87
UBE3B-204ENST00000449510 PSMG4Q5JS54 123 aa9.65□□□□□ -0.87
UBE3B-204ENST00000449510 NTN5Q8WTR8 489 aaPredicted RBP9.65□□□□□ -0.87
UBE3B-204ENST00000449510 DUX5Q96PT3 197 aa9.65□□□□□ -0.87
UBE3B-204ENST00000449510 C7orf69Q9H7B7 122 aa9.65□□□□□ -0.87
UBE3B-204ENST00000449510 PIEZO1Q92508 2521 aa9.64□□□□□ -0.87
UBE3B-204ENST00000449510 TRAV8-3A0A0A6YYJ7 113 aa9.64□□□□□ -0.87
UBE3B-204ENST00000449510 C8orf86Q6ZUL3 223 aa9.64□□□□□ -0.87
UBE3B-204ENST00000449510 SPRY4Q9C004 299 aa9.64□□□□□ -0.87
UBE3B-204ENST00000449510 DPH3P1Q9H4G8 78 aa9.64□□□□□ -0.87
UBE3B-204ENST00000449510 RS1O15537 224 aa9.64□□□□□ -0.87
UBE3B-204ENST00000449510 RPL39P62891 51 aaKnown RBP9.64□□□□□ -0.87
UBE3B-204ENST00000449510 MEIG1Q5JSS6 88 aa9.64□□□□□ -0.87
UBE3B-204ENST00000449510 TRAV12-2A0A075B6T6 113 aa9.64□□□□□ -0.87
UBE3B-204ENST00000449510 DUSP14O95147 198 aaKnown RBP9.64□□□□□ -0.87
UBE3B-204ENST00000449510 PTPRBP23467 1997 aa9.64□□□□□ -0.87
UBE3B-204ENST00000449510 TRAV8-4A0A0B4J246 113 aa9.63□□□□□ -0.87
UBE3B-204ENST00000449510 CRYGCP07315 174 aa9.63□□□□□ -0.87
UBE3B-204ENST00000449510 PRSS47A8MTI9 375 aa9.63□□□□□ -0.87
UBE3B-204ENST00000449510 IGF1P05019 195 aa9.63□□□□□ -0.87
UBE3B-204ENST00000449510 C2orf82Q6UX34 121 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms