RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 TEX48A0A1B0GUV7 120 aa10.39□□□□□ -0.75
POLR1B-209ENST00000448770 UBE2E1P51965 193 aa10.39□□□□□ -0.75
POLR1B-209ENST00000448770 SPANXN1Q5VSR9 72 aa10.39□□□□□ -0.75
POLR1B-209ENST00000448770 UNQ9165/PRO28630Q6UXU0 137 aa10.39□□□□□ -0.75
POLR1B-209ENST00000448770 RPL39LQ96EH5 51 aaKnown RBP10.39□□□□□ -0.75
POLR1B-209ENST00000448770 ABCA2Q9BZC7 2435 aa10.38□□□□□ -0.75
POLR1B-209ENST00000448770 COL12A1Q99715 3063 aa10.38□□□□□ -0.75
POLR1B-209ENST00000448770 IGHV3OR16-10A0A075B7F0 116 aa10.38□□□□□ -0.75
POLR1B-209ENST00000448770 RAB9AP51151 201 aa10.38□□□□□ -0.75
POLR1B-209ENST00000448770 C5orf56Q8N8D9 126 aa10.38□□□□□ -0.75
POLR1B-209ENST00000448770 ITLN2Q8WWU7 325 aaPredicted RBP10.38□□□□□ -0.75
POLR1B-209ENST00000448770 METTL26Q96S19 204 aa10.38□□□□□ -0.75
POLR1B-209ENST00000448770 ZFAND2AQ8N6M9 145 aa10.38□□□□□ -0.75
POLR1B-209ENST00000448770 GLMPQ8WWB7 406 aa10.38□□□□□ -0.75
POLR1B-209ENST00000448770 RASL10AQ92737 203 aa10.38□□□□□ -0.75
POLR1B-209ENST00000448770 EEF1AKMT3Q96AZ1 226 aa10.38□□□□□ -0.75
POLR1B-209ENST00000448770 SMIM2Q9BVW6 85 aa10.37□□□□□ -0.75
POLR1B-209ENST00000448770 SMPXQ9UHP9 88 aa10.37□□□□□ -0.75
POLR1B-209ENST00000448770 MYOZ3Q8TDC0 251 aa10.36□□□□□ -0.75
POLR1B-209ENST00000448770 MRPL53Q96EL3 112 aaKnown RBP10.36□□□□□ -0.75
POLR1B-209ENST00000448770 IGLL5B9A064 214 aa10.36□□□□□ -0.75
POLR1B-209ENST00000448770 E9PLD3 99 aa10.36□□□□□ -0.75
POLR1B-209ENST00000448770 M0R381 172 aa10.36□□□□□ -0.75
POLR1B-209ENST00000448770 HLA-DRB4P13762 266 aa10.36□□□□□ -0.75
POLR1B-209ENST00000448770 LMO4P61968 165 aa10.36□□□□□ -0.75
POLR1B-209ENST00000448770 C19orf54Q5BKX5 351 aa10.36□□□□□ -0.75
POLR1B-209ENST00000448770 C16orf92Q96LL3 132 aa10.36□□□□□ -0.75
POLR1B-209ENST00000448770 BPESC1Q9GZL8 116 aa10.36□□□□□ -0.75
POLR1B-209ENST00000448770 HLA-DRB4X5D2U9 266 aa10.36□□□□□ -0.75
POLR1B-209ENST00000448770 SPTBN4Q9H254 2564 aa10.36□□□□□ -0.75
POLR1B-209ENST00000448770 TRBV7-3A0A075B6L6 115 aa10.35□□□□□ -0.75
POLR1B-209ENST00000448770 F6UB75 175 aa10.35□□□□□ -0.75
POLR1B-209ENST00000448770 MTURNQ8N3F0 131 aa10.35□□□□□ -0.75
POLR1B-209ENST00000448770 DEFB104AQ8WTQ1 72 aa10.35□□□□□ -0.75
POLR1B-209ENST00000448770 TRBV7-1A0A0A6YYK4 115 aa10.34□□□□□ -0.75
POLR1B-209ENST00000448770 SOCS3O14543 225 aa10.34□□□□□ -0.75
POLR1B-209ENST00000448770 UCNP55089 124 aa10.34□□□□□ -0.75
POLR1B-209ENST00000448770 SRSF1Q07955 248 aaKnown RBP eCLIP10.34□□□□□ -0.756e-9■■■□□ 17
POLR1B-209ENST00000448770 WFDC2Q14508 124 aa10.34□□□□□ -0.75
POLR1B-209ENST00000448770 C12orf74Q32Q52 190 aa10.34□□□□□ -0.75
POLR1B-209ENST00000448770 AMTNQ6UX39 209 aa10.34□□□□□ -0.75
POLR1B-209ENST00000448770 C14orf178Q8N769 122 aaPredicted RBP10.34□□□□□ -0.75
POLR1B-209ENST00000448770 NPFFO15130 113 aa10.34□□□□□ -0.75
POLR1B-209ENST00000448770 RPL24P83731 157 aaKnown RBP10.34□□□□□ -0.75
POLR1B-209ENST00000448770 LCNL1Q6ZST4 164 aa10.34□□□□□ -0.75
POLR1B-209ENST00000448770 HIVEP3Q5T1R4 2406 aa10.34□□□□□ -0.75
POLR1B-209ENST00000448770 TMEM238C9JI98 176 aa10.33□□□□□ -0.76
POLR1B-209ENST00000448770 F8VRH5 84 aa10.33□□□□□ -0.76
POLR1B-209ENST00000448770 ATP5G2Q06055 141 aa10.33□□□□□ -0.76
POLR1B-209ENST00000448770 UBTD1Q9HAC8 227 aa10.33□□□□□ -0.76
POLR1B-209ENST00000448770 HIF1ANQ9NWT6 349 aa10.33□□□□□ -0.76
POLR1B-209ENST00000448770 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.33□□□□□ -0.76
POLR1B-209ENST00000448770 ANXA2RQ3ZCQ2 193 aa10.33□□□□□ -0.76
POLR1B-209ENST00000448770 NEXN-AS1Q8NBZ9 246 aa10.33□□□□□ -0.76
POLR1B-209ENST00000448770 RAXQ9Y2V3 346 aa10.33□□□□□ -0.76
POLR1B-209ENST00000448770 PRSS29PA6NIE9 313 aa10.32□□□□□ -0.76
POLR1B-209ENST00000448770 H3BMG7 143 aa10.32□□□□□ -0.76
POLR1B-209ENST00000448770 GNRH2O43555 120 aa10.32□□□□□ -0.76
POLR1B-209ENST00000448770 EDN2P20800 178 aa10.32□□□□□ -0.76
POLR1B-209ENST00000448770 SUMO2P61956 95 aaKnown RBP10.32□□□□□ -0.76
POLR1B-209ENST00000448770 PSMG4Q5JS54 123 aa10.32□□□□□ -0.76
POLR1B-209ENST00000448770 TOMM6Q96B49 74 aa10.32□□□□□ -0.76
POLR1B-209ENST00000448770 MRAP2Q96G30 205 aa10.32□□□□□ -0.76
POLR1B-209ENST00000448770 SPOCK3Q9BQ16 436 aa10.32□□□□□ -0.76
POLR1B-209ENST00000448770 MUC4Q99102 2169 aa10.32□□□□□ -0.76
POLR1B-209ENST00000448770 TRAV41A0A0B4J266 112 aa10.32□□□□□ -0.76
POLR1B-209ENST00000448770 PLNP26678 52 aa10.32□□□□□ -0.76
POLR1B-209ENST00000448770 ZNF479Q96JC4 524 aa10.32□□□□□ -0.76
POLR1B-209ENST00000448770 IGKV3-7A0A075B6H7 116 aa10.31□□□□□ -0.76
POLR1B-209ENST00000448770 TRAV12-1A0A0B4J245 112 aa10.31□□□□□ -0.76
POLR1B-209ENST00000448770 H7C1H1 209 aa10.31□□□□□ -0.76
POLR1B-209ENST00000448770 BRD3OSQ6XYD6 125 aa10.31□□□□□ -0.76
POLR1B-209ENST00000448770 FOXI2Q6ZQN5 318 aa10.31□□□□□ -0.76
POLR1B-209ENST00000448770 C9orf139Q6ZV77 190 aa10.31□□□□□ -0.76
POLR1B-209ENST00000448770 BAALCQ8WXS3 180 aa10.31□□□□□ -0.76
POLR1B-209ENST00000448770 SCGB3A1Q96QR1 104 aa10.31□□□□□ -0.76
POLR1B-209ENST00000448770 HIST1H4GQ99525 98 aa10.31□□□□□ -0.76
POLR1B-209ENST00000448770 SPANXB1Q9NS25 103 aaPredicted RBP10.31□□□□□ -0.76
POLR1B-209ENST00000448770 CHTOPQ9Y3Y2 248 aaKnown RBP10.31□□□□□ -0.76
POLR1B-209ENST00000448770 LGALS1P09382 135 aaKnown RBP10.31□□□□□ -0.76
POLR1B-209ENST00000448770 RNASE3P12724 160 aaKnown RBP10.31□□□□□ -0.76
POLR1B-209ENST00000448770 ARL3P36405 182 aa10.31□□□□□ -0.76
POLR1B-209ENST00000448770 SH2D6Q7Z4S9 175 aa10.31□□□□□ -0.76
POLR1B-209ENST00000448770 IGHV3-11P01762 117 aa10.3□□□□□ -0.76
POLR1B-209ENST00000448770 MGPP08493 103 aa10.3□□□□□ -0.76
POLR1B-209ENST00000448770 PLEKHB2Q96CS7 222 aa10.3□□□□□ -0.76
POLR1B-209ENST00000448770 MORN3Q6PF18 240 aaPredicted RBP10.3□□□□□ -0.76
POLR1B-209ENST00000448770 C2orf66Q6UXQ4 117 aa10.3□□□□□ -0.76
POLR1B-209ENST00000448770 Q6ZS46 218 aa10.3□□□□□ -0.76
POLR1B-209ENST00000448770 FAM19A4Q96LR4 140 aa10.3□□□□□ -0.76
POLR1B-209ENST00000448770 PRO0461Q9UI25 63 aa10.3□□□□□ -0.76
POLR1B-209ENST00000448770 CYSLTR1Q9Y271 337 aa10.3□□□□□ -0.76
POLR1B-209ENST00000448770 SPTAN1Q13813 2472 aaKnown RBP10.29□□□□□ -0.76
POLR1B-209ENST00000448770 MYMXA0A1B0GTQ4 84 aa10.29□□□□□ -0.76
POLR1B-209ENST00000448770 CRYGDP07320 174 aa10.29□□□□□ -0.76
POLR1B-209ENST00000448770 KLRB1Q12918 225 aa10.29□□□□□ -0.76
POLR1B-209ENST00000448770 JPT2Q9H910 190 aa10.29□□□□□ -0.76
POLR1B-209ENST00000448770 A0A1B0GWB2 263 aa10.29□□□□□ -0.76
POLR1B-209ENST00000448770 TSHBP01222 138 aa10.29□□□□□ -0.76
POLR1B-209ENST00000448770 RNASE4P34096 147 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms