RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 TMEM88Q6PEY1 159 aa8.42□□□□□ -1.06
RFC4-208ENST00000447345 NDUFAF3Q9BU61 184 aa8.42□□□□□ -1.06
RFC4-208ENST00000447345 MDFICQ9P1T7 246 aa8.42□□□□□ -1.06
RFC4-208ENST00000447345 MUC4Q99102 2169 aa8.41□□□□□ -1.06
RFC4-208ENST00000447345 TRGV2A0A075B6R0 118 aa8.41□□□□□ -1.06
RFC4-208ENST00000447345 TEX46H3BTG2 121 aa8.41□□□□□ -1.06
RFC4-208ENST00000447345 GNRH2O43555 120 aa8.41□□□□□ -1.06
RFC4-208ENST00000447345 TYMSP04818 313 aa8.41□□□□□ -1.06
RFC4-208ENST00000447345 DAZ2Q13117 558 aaKnown RBP8.41□□□□□ -1.06
RFC4-208ENST00000447345 SAPCD1Q5SSQ6 148 aa8.41□□□□□ -1.06
RFC4-208ENST00000447345 LINC00612Q8N6U2 182 aa8.41□□□□□ -1.06
RFC4-208ENST00000447345 NHLRC2Q8NBF2 726 aa8.41□□□□□ -1.06
RFC4-208ENST00000447345 FMC1Q96HJ9 113 aa8.41□□□□□ -1.06
RFC4-208ENST00000447345 TCEAL7Q9BRU2 100 aa8.41□□□□□ -1.06
RFC4-208ENST00000447345 SDF2L1Q9HCN8 221 aa8.41□□□□□ -1.06
RFC4-208ENST00000447345 MANBALQ9NQG1 85 aa8.41□□□□□ -1.06
RFC4-208ENST00000447345 C11orf21Q9P2W6 132 aa8.41□□□□□ -1.06
RFC4-208ENST00000447345 NACAE9PAV3 2078 aa8.41□□□□□ -1.06
RFC4-208ENST00000447345 TRAV1-1A0A0B4J248 108 aa8.4□□□□□ -1.06
RFC4-208ENST00000447345 SPINK4O60575 86 aa8.4□□□□□ -1.06
RFC4-208ENST00000447345 PFN1P07737 140 aaKnown RBP8.4□□□□□ -1.06
RFC4-208ENST00000447345 TCTAP57738 103 aa8.4□□□□□ -1.06
RFC4-208ENST00000447345 OR5I1Q13606 314 aa8.4□□□□□ -1.06
RFC4-208ENST00000447345 ZC2HC1AQ96GY0 325 aa8.4□□□□□ -1.06
RFC4-208ENST00000447345 VPS13DQ5THJ4 4388 aa8.39□□□□□ -1.07
RFC4-208ENST00000447345 IGHV3-16A0A0C4DH30 117 aa8.39□□□□□ -1.07
RFC4-208ENST00000447345 IFNA1P01562 189 aa8.39□□□□□ -1.07
RFC4-208ENST00000447345 IGHV3-53P01767 116 aa8.39□□□□□ -1.07
RFC4-208ENST00000447345 HOXA5P20719 270 aa8.39□□□□□ -1.07
RFC4-208ENST00000447345 TDRG1Q3Y452 100 aa8.39□□□□□ -1.07
RFC4-208ENST00000447345 M0R036 132 aa8.38□□□□□ -1.07
RFC4-208ENST00000447345 LCE2DQ5TA82 110 aaPredicted RBP8.38□□□□□ -1.07
RFC4-208ENST00000447345 LGALS9CQ6DKI2 356 aa8.38□□□□□ -1.07
RFC4-208ENST00000447345 KCNS1Q96KK3 526 aa8.38□□□□□ -1.07
RFC4-208ENST00000447345 DERL1Q9BUN8 251 aa8.38□□□□□ -1.07
RFC4-208ENST00000447345 TRAV26-1A0A087WT03 109 aa8.37□□□□□ -1.07
RFC4-208ENST00000447345 A0A0J9YY99 117 aa8.37□□□□□ -1.07
RFC4-208ENST00000447345 SH2D1AO60880 128 aa8.37□□□□□ -1.07
RFC4-208ENST00000447345 NUDT3O95989 172 aa8.37□□□□□ -1.07
RFC4-208ENST00000447345 LTAP01374 205 aa8.37□□□□□ -1.07
RFC4-208ENST00000447345 BCL2P10415 239 aa8.37□□□□□ -1.07
RFC4-208ENST00000447345 CRIP1P50238 77 aa8.37□□□□□ -1.07
RFC4-208ENST00000447345 MEF2BQ02080 365 aaPredicted RBP8.37□□□□□ -1.07
RFC4-208ENST00000447345 FAM210BQ96KR6 192 aa8.37□□□□□ -1.07
RFC4-208ENST00000447345 ZFP30Q9Y2G7 519 aa8.37□□□□□ -1.07
RFC4-208ENST00000447345 TMSB15BA0A087X1C1 80 aa8.36□□□□□ -1.07
RFC4-208ENST00000447345 IGKV3D-20A0A0C4DH25 116 aa8.36□□□□□ -1.07
RFC4-208ENST00000447345 TRBV6-1A0A0K0K1D8 114 aa8.36□□□□□ -1.07
RFC4-208ENST00000447345 FABP5P3A8MUU1 101 aa8.36□□□□□ -1.07
RFC4-208ENST00000447345 ORM1P02763 201 aa8.36□□□□□ -1.07
RFC4-208ENST00000447345 RPL35P42766 123 aaKnown RBP8.36□□□□□ -1.07
RFC4-208ENST00000447345 LGALS9BQ3B8N2 356 aa8.36□□□□□ -1.07
RFC4-208ENST00000447345 UBE2DNLQ8IWF7 75 aa8.36□□□□□ -1.07
RFC4-208ENST00000447345 SPXQ9BT56 116 aa8.36□□□□□ -1.07
RFC4-208ENST00000447345 B4DEV8 164 aa8.35□□□□□ -1.07
RFC4-208ENST00000447345 C9JCJ5 164 aa8.35□□□□□ -1.07
RFC4-208ENST00000447345 S100A9P06702 114 aaKnown RBP8.35□□□□□ -1.07
RFC4-208ENST00000447345 SFTA3P0C7M3 94 aa8.35□□□□□ -1.07
RFC4-208ENST00000447345 BLOC1S1P78537 153 aa8.35□□□□□ -1.07
RFC4-208ENST00000447345 FAM162BQ5T6X4 162 aa8.35□□□□□ -1.07
RFC4-208ENST00000447345 PRR27Q6MZM9 219 aa8.35□□□□□ -1.07
RFC4-208ENST00000447345 BAGE2Q86Y30 109 aa8.35□□□□□ -1.07
RFC4-208ENST00000447345 C15orf53Q8NAA6 179 aa8.35□□□□□ -1.07
RFC4-208ENST00000447345 C11orf52Q96A22 123 aa8.35□□□□□ -1.07
RFC4-208ENST00000447345 VAX2Q9UIW0 290 aa8.35□□□□□ -1.07
RFC4-208ENST00000447345 GRIFINA4D1Z8 144 aa8.34□□□□□ -1.07
RFC4-208ENST00000447345 H3BVH4 76 aa8.34□□□□□ -1.07
RFC4-208ENST00000447345 M0R2P5 195 aa8.34□□□□□ -1.07
RFC4-208ENST00000447345 P0DMU3 169 aa8.34□□□□□ -1.07
RFC4-208ENST00000447345 FAM231AP0DMU4 169 aa8.34□□□□□ -1.07
RFC4-208ENST00000447345 FAM231CP0DMU5 169 aa8.34□□□□□ -1.07
RFC4-208ENST00000447345 S100A4P26447 101 aaKnown RBP8.34□□□□□ -1.07
RFC4-208ENST00000447345 ASIPP42127 132 aa8.34□□□□□ -1.07
RFC4-208ENST00000447345 CENPWQ5EE01 88 aa8.34□□□□□ -1.07
RFC4-208ENST00000447345 PCNPQ8WW12 178 aaKnown RBP8.34□□□□□ -1.07
RFC4-208ENST00000447345 C18orf15Q96N68 181 aa8.34□□□□□ -1.07
RFC4-208ENST00000447345 MED9Q9NWA0 146 aa8.34□□□□□ -1.07
RFC4-208ENST00000447345 RAB19A4D1S5 217 aa8.33□□□□□ -1.08
RFC4-208ENST00000447345 KRBOX1C9JBD0 128 aa8.33□□□□□ -1.08
RFC4-208ENST00000447345 PDE6DO43924 150 aa8.33□□□□□ -1.08
RFC4-208ENST00000447345 MGST1P10620 155 aaKnown RBP8.33□□□□□ -1.08
RFC4-208ENST00000447345 RNASE3P12724 160 aaKnown RBP8.33□□□□□ -1.08
RFC4-208ENST00000447345 ZNF674Q2M3X9 581 aa8.33□□□□□ -1.08
RFC4-208ENST00000447345 ZNF876PQ49A33 203 aa8.33□□□□□ -1.08
RFC4-208ENST00000447345 COX8CQ7Z4L0 72 aa8.33□□□□□ -1.08
RFC4-208ENST00000447345 RASL10AQ92737 203 aa8.33□□□□□ -1.08
RFC4-208ENST00000447345 ZNF479Q96JC4 524 aa8.33□□□□□ -1.08
RFC4-208ENST00000447345 C9orf85Q96MD7 179 aa8.33□□□□□ -1.08
RFC4-208ENST00000447345 TXNDC17Q9BRA2 123 aa8.33□□□□□ -1.08
RFC4-208ENST00000447345 DNAH6Q9C0G6 4158 aa8.32□□□□□ -1.08
RFC4-208ENST00000447345 TRGV4A0A0C4DH28 118 aa8.32□□□□□ -1.08
RFC4-208ENST00000447345 PGPEP1LA6NFU8 196 aa8.32□□□□□ -1.08
RFC4-208ENST00000447345 GNG4P50150 75 aa8.32□□□□□ -1.08
RFC4-208ENST00000447345 RPL19P84098 196 aaKnown RBP8.32□□□□□ -1.08
RFC4-208ENST00000447345 TOR2AQ5JU69 321 aa8.32□□□□□ -1.08
RFC4-208ENST00000447345 POM121L12Q8N7R1 296 aa8.32□□□□□ -1.08
RFC4-208ENST00000447345 OR4C5Q8NGB2 326 aa8.32□□□□□ -1.08
RFC4-208ENST00000447345 MLST8Q9BVC4 326 aa8.32□□□□□ -1.08
RFC4-208ENST00000447345 TRAV4A0A0B4J268 109 aa8.31□□□□□ -1.08
RFC4-208ENST00000447345 RBFOX3A6NFN3 312 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms