RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 ZFP69Q49AA0 526 aa12.99□□□□□ -0.33
CCDC188-202ENST00000444532 PRNTQ86SH4 94 aa12.99□□□□□ -0.33
CCDC188-202ENST00000444532 C8orf49Q96NF6 230 aa12.99□□□□□ -0.33
CCDC188-202ENST00000444532 GNRH2O43555 120 aa12.98□□□□□ -0.33
CCDC188-202ENST00000444532 FHITP49789 147 aa12.98□□□□□ -0.33
CCDC188-202ENST00000444532 SMUG1Q53HV7 270 aa12.98□□□□□ -0.33
CCDC188-202ENST00000444532 DPPA3Q6W0C5 159 aa12.98□□□□□ -0.33
CCDC188-202ENST00000444532 C9orf62Q8N4C0 152 aa12.98□□□□□ -0.33
CCDC188-202ENST00000444532 RASL10AQ92737 203 aa12.98□□□□□ -0.33
CCDC188-202ENST00000444532 HIST1H2BAQ96A08 127 aa12.98□□□□□ -0.33
CCDC188-202ENST00000444532 SDF2L1Q9HCN8 221 aa12.98□□□□□ -0.33
CCDC188-202ENST00000444532 MUC4Q99102 2169 aa12.97□□□□□ -0.33
CCDC188-202ENST00000444532 IGHV3-16A0A0C4DH30 117 aa12.97□□□□□ -0.33
CCDC188-202ENST00000444532 M0R2N4 97 aa12.97□□□□□ -0.33
CCDC188-202ENST00000444532 PEX7O00628 323 aa12.97□□□□□ -0.33
CCDC188-202ENST00000444532 GCGP01275 180 aa12.97□□□□□ -0.33
CCDC188-202ENST00000444532 SLAQ13239 276 aa12.97□□□□□ -0.33
CCDC188-202ENST00000444532 MBD3L1Q8WWY6 194 aa12.97□□□□□ -0.33
CCDC188-202ENST00000444532 LINC00479Q96M42 142 aa12.97□□□□□ -0.33
CCDC188-202ENST00000444532 ARL2-SNX15V9GYD0 113 aa12.97□□□□□ -0.33
CCDC188-202ENST00000444532 IGLV2-18A0A075B6J9 118 aa12.96□□□□□ -0.33
CCDC188-202ENST00000444532 TYMSP04818 313 aa12.96□□□□□ -0.33
CCDC188-202ENST00000444532 PFN1P07737 140 aaKnown RBP12.96□□□□□ -0.33
CCDC188-202ENST00000444532 TPT1P13693 172 aaKnown RBP12.96□□□□□ -0.33
CCDC188-202ENST00000444532 ZNF80P51504 273 aaPredicted RBP12.96□□□□□ -0.33
CCDC188-202ENST00000444532 Q6ZR54 194 aa12.96□□□□□ -0.33
CCDC188-202ENST00000444532 FAM213BQ8TBF2 198 aa12.96□□□□□ -0.33
CCDC188-202ENST00000444532 VSIG2Q96IQ7 327 aa12.96□□□□□ -0.33
CCDC188-202ENST00000444532 TCEAL7Q9BRU2 100 aa12.96□□□□□ -0.33
CCDC188-202ENST00000444532 TRAV34A0A0B4J273 112 aa12.95□□□□□ -0.34
CCDC188-202ENST00000444532 M0R2P5 195 aa12.95□□□□□ -0.34
CCDC188-202ENST00000444532 NKX2-5P52952 324 aaPredicted RBP12.95□□□□□ -0.34
CCDC188-202ENST00000444532 SFT2D1Q8WV19 159 aa12.95□□□□□ -0.34
CCDC188-202ENST00000444532 PRO0255Q9UI72 69 aa12.95□□□□□ -0.34
CCDC188-202ENST00000444532 LINC00588Q9Y4M8 146 aa12.95□□□□□ -0.34
CCDC188-202ENST00000444532 EPPK1P58107 5090 aaKnown RBP12.94□□□□□ -0.34
CCDC188-202ENST00000444532 PAX4O43316 350 aa12.94□□□□□ -0.34
CCDC188-202ENST00000444532 IGHV3-53P01767 116 aa12.94□□□□□ -0.34
CCDC188-202ENST00000444532 CST9LP1Q5W188 147 aa12.94□□□□□ -0.34
CCDC188-202ENST00000444532 LINC00336Q6ZUF6 198 aa12.94□□□□□ -0.34
CCDC188-202ENST00000444532 ZNRF2Q8NHG8 242 aa12.94□□□□□ -0.34
CCDC188-202ENST00000444532 C11orf21Q9P2W6 132 aa12.94□□□□□ -0.34
CCDC188-202ENST00000444532 HHLA3Q9XRX5 114 aa12.94□□□□□ -0.34
CCDC188-202ENST00000444532 FHL2Q14192 279 aa12.93□□□□□ -0.34
CCDC188-202ENST00000444532 SLC51BQ86UW2 128 aa12.93□□□□□ -0.34
CCDC188-202ENST00000444532 A0A096LPF7 62 aa12.92□□□□□ -0.34
CCDC188-202ENST00000444532 TRGV4A0A0C4DH28 118 aa12.92□□□□□ -0.34
CCDC188-202ENST00000444532 FABP5P3A8MUU1 101 aa12.92□□□□□ -0.34
CCDC188-202ENST00000444532 H2AFB1P0C5Y9 115 aa12.92□□□□□ -0.34
CCDC188-202ENST00000444532 ESRGQ1W209 222 aa12.92□□□□□ -0.34
CCDC188-202ENST00000444532 Q86TA4 180 aa12.92□□□□□ -0.34
CCDC188-202ENST00000444532 FMC1Q96HJ9 113 aa12.92□□□□□ -0.34
CCDC188-202ENST00000444532 ZFP30Q9Y2G7 519 aa12.92□□□□□ -0.34
CCDC188-202ENST00000444532 DNAH10Q8IVF4 4471 aa12.91□□□□□ -0.34
CCDC188-202ENST00000444532 TRAV4A0A0B4J268 109 aa12.91□□□□□ -0.34
CCDC188-202ENST00000444532 PAGE4O60829 102 aa12.91□□□□□ -0.34
CCDC188-202ENST00000444532 CRYBA4P53673 196 aa12.91□□□□□ -0.34
CCDC188-202ENST00000444532 EIF5AL1Q6IS14 154 aaKnown RBP12.91□□□□□ -0.34
CCDC188-202ENST00000444532 BOLA1Q9Y3E2 137 aa12.91□□□□□ -0.34
CCDC188-202ENST00000444532 ICOSQ9Y6W8 199 aa12.91□□□□□ -0.34
CCDC188-202ENST00000444532 TRBV6-1A0A0K0K1D8 114 aa12.9□□□□□ -0.34
CCDC188-202ENST00000444532 RAB5CP51148 216 aa12.9□□□□□ -0.34
CCDC188-202ENST00000444532 UBE2G1P62253 170 aa12.9□□□□□ -0.34
CCDC188-202ENST00000444532 COX8CQ7Z4L0 72 aa12.9□□□□□ -0.34
CCDC188-202ENST00000444532 ZNF479Q96JC4 524 aa12.9□□□□□ -0.34
CCDC188-202ENST00000444532 FRAS1Q86XX4 4008 aa12.9□□□□□ -0.35
CCDC188-202ENST00000444532 RTL8CO15255 209 aa12.89□□□□□ -0.35
CCDC188-202ENST00000444532 SFTA3P0C7M3 94 aa12.89□□□□□ -0.35
CCDC188-202ENST00000444532 SOHLH1Q5JUK2 328 aa12.89□□□□□ -0.35
CCDC188-202ENST00000444532 OR4C5Q8NGB2 326 aa12.89□□□□□ -0.35
CCDC188-202ENST00000444532 UPK3BQ9BT76 320 aa12.89□□□□□ -0.35
CCDC188-202ENST00000444532 Q9H8V8 135 aa12.89□□□□□ -0.35
CCDC188-202ENST00000444532 MRPS16Q9Y3D3 137 aaKnown RBP12.89□□□□□ -0.35
CCDC188-202ENST00000444532 NBDYA0A0U1RRE5 68 aa12.88□□□□□ -0.35
CCDC188-202ENST00000444532 A0A1B0GV50 99 aa12.88□□□□□ -0.35
CCDC188-202ENST00000444532 MRPL23Q16540 153 aaKnown RBP12.88□□□□□ -0.35
CCDC188-202ENST00000444532 ZNF876PQ49A33 203 aa12.88□□□□□ -0.35
CCDC188-202ENST00000444532 PTH2Q96A98 100 aa12.88□□□□□ -0.35
CCDC188-202ENST00000444532 C9orf85Q96MD7 179 aa12.88□□□□□ -0.35
CCDC188-202ENST00000444532 IGKV3D-20A0A0C4DH25 116 aa12.87□□□□□ -0.35
CCDC188-202ENST00000444532 LTAP01374 205 aa12.87□□□□□ -0.35
CCDC188-202ENST00000444532 S100A9P06702 114 aaKnown RBP12.87□□□□□ -0.35
CCDC188-202ENST00000444532 AKR1C3P42330 323 aa12.87□□□□□ -0.35
CCDC188-202ENST00000444532 C1orf134Q5TEV5 83 aa12.87□□□□□ -0.35
CCDC188-202ENST00000444532 TRAV1-1A0A0B4J248 108 aa12.86□□□□□ -0.35
CCDC188-202ENST00000444532 C9JCJ5 164 aa12.86□□□□□ -0.35
CCDC188-202ENST00000444532 CIDEAO60543 219 aa12.86□□□□□ -0.35
CCDC188-202ENST00000444532 ORM1P02763 201 aa12.86□□□□□ -0.35
CCDC188-202ENST00000444532 RNASE3P12724 160 aaKnown RBP12.86□□□□□ -0.35
CCDC188-202ENST00000444532 SULT1A2P50226 295 aa12.86□□□□□ -0.35
CCDC188-202ENST00000444532 CRIP1P50238 77 aa12.86□□□□□ -0.35
CCDC188-202ENST00000444532 ZC2HC1AQ96GY0 325 aa12.86□□□□□ -0.35
CCDC188-202ENST00000444532 PRSS29PA6NIE9 313 aa12.85□□□□□ -0.35
CCDC188-202ENST00000444532 TEX46H3BTG2 121 aa12.85□□□□□ -0.35
CCDC188-202ENST00000444532 S100A4P26447 101 aaKnown RBP12.85□□□□□ -0.35
CCDC188-202ENST00000444532 FAM162BQ5T6X4 162 aa12.85□□□□□ -0.35
CCDC188-202ENST00000444532 MANBALQ9NQG1 85 aa12.85□□□□□ -0.35
CCDC188-202ENST00000444532 B4DEV8 164 aa12.84□□□□□ -0.35
CCDC188-202ENST00000444532 ASIPP42127 132 aa12.84□□□□□ -0.35
CCDC188-202ENST00000444532 ZNF674Q2M3X9 581 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms