RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 HOXB4P17483 251 aaPredicted RBP3.92□□□□□ -1.78
HERC1-201ENST00000443617 SUMO2P61956 95 aaKnown RBP3.92□□□□□ -1.78
HERC1-201ENST00000443617 TOMM6Q96B49 74 aa3.92□□□□□ -1.78
HERC1-201ENST00000443617 C16orf97H3BN30 126 aa3.92□□□□□ -1.78
HERC1-201ENST00000443617 J3QQQ9 107 aa3.92□□□□□ -1.78
HERC1-201ENST00000443617 SMCPP49901 116 aaPredicted RBP3.92□□□□□ -1.78
HERC1-201ENST00000443617 MDS2Q8NDY4 140 aa3.92□□□□□ -1.78
HERC1-201ENST00000443617 SRSF2Q01130 221 aaKnown RBP3.92□□□□□ -1.78
HERC1-201ENST00000443617 KLHL30-AS1Q8NEE0 82 aa3.92□□□□□ -1.78
HERC1-201ENST00000443617 I3L2K1 104 aa3.92□□□□□ -1.78
HERC1-201ENST00000443617 GOLGB1Q14789 3259 aaKnown RBP3.92□□□□□ -1.78
HERC1-201ENST00000443617 K7EIM0 57 aa3.92□□□□□ -1.78
HERC1-201ENST00000443617 CENPVL3A0A0U1RRI6 287 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 IGLV1-44P01699 117 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 C14orf178Q8N769 122 aaPredicted RBP3.91□□□□□ -1.78
HERC1-201ENST00000443617 IGHV3OR16-8A0A075B7F1 116 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 IGHV3-23P01764 117 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 CD3EP07766 207 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 FOXC1Q12948 553 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 SLC25A15Q9Y619 301 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 J3KT08 172 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 LGALS9O00182 355 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 C2orf66Q6UXQ4 117 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 LINC00311Q8N616 119 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 ZNF784Q8NCA9 323 aaPredicted RBP3.91□□□□□ -1.78
HERC1-201ENST00000443617 OR13C6PQ8NH95 151 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 M0QXV9 152 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 H3BMM0 161 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 UBE2WQ96B02 151 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 DNAJC30Q96LL9 226 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 IGHV3OR16-13A0A075B7E8 117 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 IGHV3-49A0A0A0MS15 119 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 IGHV3-74A0A0B4J1X5 117 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 C9orf153Q5TBE3 101 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 C3orf56Q8N813 242 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 VPREB3Q9UKI3 123 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 DNAH12Q6ZR08 3092 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 TCF15Q12870 199 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 C3orf22Q8N5N4 141 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 C16orf92Q96LL3 132 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 IGHV3-66A0A0C4DH42 116 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 IGHV3-35A0A0C4DH35 117 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 NDUFA7O95182 113 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 UBE2D3P61077 147 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 UBE2D2P62837 147 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 NTN3O00634 580 aaPredicted RBP3.91□□□□□ -1.78
HERC1-201ENST00000443617 TIMM23O14925 209 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 IGLC6P0CF74 106 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 NEXN-AS1Q8NBZ9 246 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 GAGE2AQ6NT46 116 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 DYNAPQ8N1N2 210 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 ZNF576Q9H609 170 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 SPANXCQ9NY87 97 aa3.91□□□□□ -1.78
HERC1-201ENST00000443617 Q6ZQT7 251 aa3.9□□□□□ -1.78
HERC1-201ENST00000443617 SLC25A29Q8N8R3 303 aa3.9□□□□□ -1.78
HERC1-201ENST00000443617 PMVKQ15126 192 aa3.9□□□□□ -1.78
HERC1-201ENST00000443617 PMS2CLQ68D20 193 aa3.9□□□□□ -1.78
HERC1-201ENST00000443617 M0R2P5 195 aa3.9□□□□□ -1.78
HERC1-201ENST00000443617 NRACQ8N912 160 aa3.9□□□□□ -1.78
HERC1-201ENST00000443617 CHCHD5Q9BSY4 110 aa3.9□□□□□ -1.78
HERC1-201ENST00000443617 CSDC2Q9Y534 153 aaKnown RBP3.9□□□□□ -1.78
HERC1-201ENST00000443617 TRBV10-2A0A0K0K1G8 114 aa3.9□□□□□ -1.78
HERC1-201ENST00000443617 DIAPH2-AS1Q14236 149 aa3.9□□□□□ -1.78
HERC1-201ENST00000443617 DUX3Q96PT4 197 aa3.9□□□□□ -1.78
HERC1-201ENST00000443617 ATP1A1-AS1Q5TC04 95 aa3.9□□□□□ -1.79
HERC1-201ENST00000443617 TRAV4A0A0B4J268 109 aa3.9□□□□□ -1.79
HERC1-201ENST00000443617 IGHV1-8P0DP01 117 aa3.9□□□□□ -1.79
HERC1-201ENST00000443617 CNTFRP26992 372 aa3.9□□□□□ -1.79
HERC1-201ENST00000443617 TEX36Q5VZQ5 186 aa3.9□□□□□ -1.79
HERC1-201ENST00000443617 TRACP01848 142 aa3.9□□□□□ -1.79
HERC1-201ENST00000443617 LINC01620Q4KN68 170 aa3.9□□□□□ -1.79
HERC1-201ENST00000443617 DUX5Q96PT3 197 aa3.9□□□□□ -1.79
HERC1-201ENST00000443617 AGPAT4-IT1Q9H0P7 198 aa3.9□□□□□ -1.79
HERC1-201ENST00000443617 A4D1N5 150 aa3.9□□□□□ -1.79
HERC1-201ENST00000443617 TRGV3P03979 118 aa3.9□□□□□ -1.79
HERC1-201ENST00000443617 NTN5Q8WTR8 489 aaPredicted RBP3.9□□□□□ -1.79
HERC1-201ENST00000443617 NBR2O15453 112 aa3.9□□□□□ -1.79
HERC1-201ENST00000443617 IGHV1-3A0A0C4DH29 117 aa3.9□□□□□ -1.79
HERC1-201ENST00000443617 CPAMD8Q8IZJ3 1885 aa3.9□□□□□ -1.79
HERC1-201ENST00000443617 TMEM178BH3BS89 294 aa3.89□□□□□ -1.79
HERC1-201ENST00000443617 CNFNQ9BYD5 112 aa3.89□□□□□ -1.79
HERC1-201ENST00000443617 MSMPQ1L6U9 139 aa3.89□□□□□ -1.79
HERC1-201ENST00000443617 DEFB123Q8N688 67 aa3.89□□□□□ -1.79
HERC1-201ENST00000443617 NHLRC4P0CG21 123 aaPredicted RBP3.89□□□□□ -1.79
HERC1-201ENST00000443617 MRPL23Q16540 153 aaKnown RBP3.89□□□□□ -1.79
HERC1-201ENST00000443617 Q6Q795 121 aa3.89□□□□□ -1.79
HERC1-201ENST00000443617 RNF182Q8N6D2 247 aa3.89□□□□□ -1.79
HERC1-201ENST00000443617 EDA2RQ9HAV5 297 aa3.89□□□□□ -1.79
HERC1-201ENST00000443617 TRAV12-3A0A0B4J271 114 aa3.89□□□□□ -1.79
HERC1-201ENST00000443617 CRYGBP07316 175 aa3.89□□□□□ -1.79
HERC1-201ENST00000443617 IGHV3-30P01768 117 aa3.89□□□□□ -1.79
HERC1-201ENST00000443617 IGHV3-30-5P0DP03 117 aa3.89□□□□□ -1.79
HERC1-201ENST00000443617 FHL3Q13643 280 aa3.89□□□□□ -1.79
HERC1-201ENST00000443617 RUSC1-AS1Q66K80 236 aa3.89□□□□□ -1.79
HERC1-201ENST00000443617 COPS9Q8WXC6 57 aa3.89□□□□□ -1.79
HERC1-201ENST00000443617 RBAKDNA6NC62 111 aa3.89□□□□□ -1.79
HERC1-201ENST00000443617 UBE2D1P51668 147 aa3.89□□□□□ -1.79
HERC1-201ENST00000443617 DPM3Q9P2X0 92 aa3.89□□□□□ -1.79
HERC1-201ENST00000443617 P0DMU3 169 aa3.89□□□□□ -1.79
HERC1-201ENST00000443617 FAM231AP0DMU4 169 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms