RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 ARMS2P0C7Q2 107 aa14.12□□□□□ -0.15
SNX17-203ENST00000440760 CAMPP49913 170 aa14.12□□□□□ -0.15
SNX17-203ENST00000440760 RAB4BP61018 213 aa14.12□□□□□ -0.15
SNX17-203ENST00000440760 WFDC10AQ9H1F0 79 aa14.12□□□□□ -0.15
SNX17-203ENST00000440760 TRAPPC1Q9Y5R8 145 aa14.12□□□□□ -0.15
SNX17-203ENST00000440760 TRAV21A0A0B4J279 112 aa14.11□□□□□ -0.15
SNX17-203ENST00000440760 CD7P09564 240 aa14.11□□□□□ -0.15
SNX17-203ENST00000440760 LEPP41159 167 aa14.11□□□□□ -0.15
SNX17-203ENST00000440760 GFI1BQ5VTD9 330 aa14.11□□□□□ -0.15
SNX17-203ENST00000440760 LINC00469Q8N7U9 141 aa14.11□□□□□ -0.15
SNX17-203ENST00000440760 ODF3Q96PU9 254 aa14.11□□□□□ -0.15
SNX17-203ENST00000440760 TRAV12-3A0A0B4J271 114 aa14.11□□□□□ -0.15
SNX17-203ENST00000440760 A0A1B0GXF2 115 aa14.11□□□□□ -0.15
SNX17-203ENST00000440760 XKRY2A2RUG3 117 aa14.11□□□□□ -0.15
SNX17-203ENST00000440760 Q6AWC8 147 aa14.11□□□□□ -0.15
SNX17-203ENST00000440760 LYZL1Q6UWQ5 148 aa14.11□□□□□ -0.15
SNX17-203ENST00000440760 TMEM136Q6ZRR5 245 aa14.11□□□□□ -0.15
SNX17-203ENST00000440760 OR11H12B2RN74 326 aa14.1□□□□□ -0.15
SNX17-203ENST00000440760 FOXA3P55318 350 aaPredicted RBP14.1□□□□□ -0.15
SNX17-203ENST00000440760 RPS20P60866 119 aaKnown RBP14.1□□□□□ -0.15
SNX17-203ENST00000440760 C7orf71A4D174 169 aa14.09□□□□□ -0.15
SNX17-203ENST00000440760 HIST1H2BKO60814 126 aa14.09□□□□□ -0.15
SNX17-203ENST00000440760 HIST1H2BJP06899 126 aa14.09□□□□□ -0.15
SNX17-203ENST00000440760 TRGC1P0CF51 173 aa14.09□□□□□ -0.15
SNX17-203ENST00000440760 IGLC6P0CF74 106 aa14.09□□□□□ -0.15
SNX17-203ENST00000440760 HIST1H2BOP23527 126 aa14.09□□□□□ -0.15
SNX17-203ENST00000440760 HIST1H2BBP33778 126 aa14.09□□□□□ -0.15
SNX17-203ENST00000440760 CDKN1BP46527 198 aa14.09□□□□□ -0.15
SNX17-203ENST00000440760 HIST1H2BDP58876 126 aa14.09□□□□□ -0.15
SNX17-203ENST00000440760 HIST1H2BCP62807 126 aa14.09□□□□□ -0.15
SNX17-203ENST00000440760 HIST2H2BEQ16778 126 aa14.09□□□□□ -0.15
SNX17-203ENST00000440760 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.09□□□□□ -0.15
SNX17-203ENST00000440760 FER1L6-AS1Q8NA97 138 aa14.09□□□□□ -0.15
SNX17-203ENST00000440760 OR2K2Q8NGT1 345 aa14.09□□□□□ -0.15
SNX17-203ENST00000440760 HIST1H2BHQ93079 126 aa14.09□□□□□ -0.15
SNX17-203ENST00000440760 HIST1H2BNQ99877 126 aa14.09□□□□□ -0.15
SNX17-203ENST00000440760 HIST1H2BMQ99879 126 aa14.09□□□□□ -0.15
SNX17-203ENST00000440760 MRPL18Q9H0U6 180 aaKnown RBP14.09□□□□□ -0.15
SNX17-203ENST00000440760 ANXA2RQ3ZCQ2 193 aa14.09□□□□□ -0.15
SNX17-203ENST00000440760 SSBP4Q9BWG4 385 aaPredicted RBP14.09□□□□□ -0.15
SNX17-203ENST00000440760 HBBP68871 147 aa14.08□□□□□ -0.16
SNX17-203ENST00000440760 ATP5L2Q7Z4Y8 100 aa14.08□□□□□ -0.16
SNX17-203ENST00000440760 GNB1LQ9BYB4 327 aa14.08□□□□□ -0.16
SNX17-203ENST00000440760 A0A1B0GUT8 65 aa14.07□□□□□ -0.16
SNX17-203ENST00000440760 A8MTW9 85 aa14.07□□□□□ -0.16
SNX17-203ENST00000440760 BEAN1Q3B7T3 259 aa14.07□□□□□ -0.16
SNX17-203ENST00000440760 DNLZQ5SXM8 178 aa14.07□□□□□ -0.16
SNX17-203ENST00000440760 ZNF747Q9BV97 191 aa14.07□□□□□ -0.16
SNX17-203ENST00000440760 S100A2P29034 98 aa14.07□□□□□ -0.16
SNX17-203ENST00000440760 CTRLP40313 264 aa14.07□□□□□ -0.16
SNX17-203ENST00000440760 C3orf56Q8N813 242 aa14.07□□□□□ -0.16
SNX17-203ENST00000440760 COL6A5A8TX70 2615 aa14.07□□□□□ -0.16
SNX17-203ENST00000440760 RBMY1A1P0DJD3 496 aaKnown RBP14.06□□□□□ -0.16
SNX17-203ENST00000440760 RBMY1CP0DJD4 496 aa14.06□□□□□ -0.16
SNX17-203ENST00000440760 TSPOP30536 169 aa14.06□□□□□ -0.16
SNX17-203ENST00000440760 RBMY1FQ15415 496 aaKnown RBP14.06□□□□□ -0.16
SNX17-203ENST00000440760 WDR73Q6P4I2 378 aa14.06□□□□□ -0.16
SNX17-203ENST00000440760 TIMM8BQ9Y5J9 83 aaPredicted RBP14.06□□□□□ -0.16
SNX17-203ENST00000440760 H3BVH4 76 aa14.05□□□□□ -0.16
SNX17-203ENST00000440760 CRXO43186 299 aaPredicted RBP14.05□□□□□ -0.16
SNX17-203ENST00000440760 SPRY2O43597 315 aa14.05□□□□□ -0.16
SNX17-203ENST00000440760 ZNF324O75467 553 aaPredicted RBP14.05□□□□□ -0.16
SNX17-203ENST00000440760 SLAQ13239 276 aa14.05□□□□□ -0.16
SNX17-203ENST00000440760 KIAA1644Q3SXP7 199 aa14.05□□□□□ -0.16
SNX17-203ENST00000440760 C9orf66Q5T8R8 295 aa14.05□□□□□ -0.16
SNX17-203ENST00000440760 C19orf73Q9NVV2 129 aa14.05□□□□□ -0.16
SNX17-203ENST00000440760 GNRH2O43555 120 aa14.05□□□□□ -0.16
SNX17-203ENST00000440760 NDUFA6P56556 154 aa14.05□□□□□ -0.16
SNX17-203ENST00000440760 STHQ8IWL8 128 aa14.05□□□□□ -0.16
SNX17-203ENST00000440760 HLA-DQA1P01909 254 aa14.04□□□□□ -0.16
SNX17-203ENST00000440760 RASL11AQ6T310 242 aa14.04□□□□□ -0.16
SNX17-203ENST00000440760 BORCS7Q96B45 105 aa14.04□□□□□ -0.16
SNX17-203ENST00000440760 IFITM10A6NMD0 228 aa14.03□□□□□ -0.16
SNX17-203ENST00000440760 MT-ND6P03923 174 aa14.03□□□□□ -0.16
SNX17-203ENST00000440760 IGLL1P15814 213 aa14.03□□□□□ -0.16
SNX17-203ENST00000440760 C12orf54Q6X4T0 127 aa14.03□□□□□ -0.16
SNX17-203ENST00000440760 OR10AG1Q8NH19 301 aa14.03□□□□□ -0.16
SNX17-203ENST00000440760 RIGQ13278 110 aa14.03□□□□□ -0.16
SNX17-203ENST00000440760 PYY3Q5JQD4 70 aa14.03□□□□□ -0.16
SNX17-203ENST00000440760 TRPT1Q86TN4 253 aaKnown RBP14.03□□□□□ -0.16
SNX17-203ENST00000440760 MSRB1Q9NZV6 116 aa14.03□□□□□ -0.16
SNX17-203ENST00000440760 TP53TG3Q9ULZ0 132 aa14.03□□□□□ -0.16
SNX17-203ENST00000440760 CMYA5Q8N3K9 4069 aa14.02□□□□□ -0.16
SNX17-203ENST00000440760 INSL3P51460 131 aa14.02□□□□□ -0.16
SNX17-203ENST00000440760 COX19Q49B96 90 aa14.02□□□□□ -0.16
SNX17-203ENST00000440760 FAM159AQ6UWV7 190 aa14.02□□□□□ -0.16
SNX17-203ENST00000440760 APCSP02743 223 aa14.02□□□□□ -0.17
SNX17-203ENST00000440760 NTF3P20783 257 aa14.01□□□□□ -0.17
SNX17-203ENST00000440760 ASIPP42127 132 aa14.01□□□□□ -0.17
SNX17-203ENST00000440760 TWIST1Q15672 202 aa14.01□□□□□ -0.17
SNX17-203ENST00000440760 S100A4P26447 101 aaKnown RBP14□□□□□ -0.17
SNX17-203ENST00000440760 TMEM158Q8WZ71 300 aa14□□□□□ -0.17
SNX17-203ENST00000440760 CNFNQ9BYD5 112 aa14□□□□□ -0.17
SNX17-203ENST00000440760 XCL2Q9UBD3 114 aa14□□□□□ -0.17
SNX17-203ENST00000440760 SNAI2O43623 268 aa13.99□□□□□ -0.17
SNX17-203ENST00000440760 RNASE3P12724 160 aaKnown RBP13.99□□□□□ -0.17
SNX17-203ENST00000440760 SHISA2Q6UWI4 295 aa13.99□□□□□ -0.17
SNX17-203ENST00000440760 DEFB125Q8N687 156 aa13.99□□□□□ -0.17
SNX17-203ENST00000440760 WFDC9Q8NEX5 89 aa13.99□□□□□ -0.17
SNX17-203ENST00000440760 FAM110AQ9BQ89 295 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms