RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 RAB11AP62491 216 aa6.29□□□□□ -1.4
RTN4-211ENST00000438462 Q6AWC8 147 aa6.29□□□□□ -1.4
RTN4-211ENST00000438462 LINC00846Q9NV44 126 aa6.29□□□□□ -1.4
RTN4-211ENST00000438462 HSPB7Q9UBY9 170 aa6.29□□□□□ -1.4
RTN4-211ENST00000438462 PKIGQ9Y2B9 76 aa6.29□□□□□ -1.4
RTN4-211ENST00000438462 DIRC3C9JPN6 131 aa6.28□□□□□ -1.4
RTN4-211ENST00000438462 PRSS46E5RG02 174 aa6.28□□□□□ -1.4
RTN4-211ENST00000438462 RCVRNP35243 200 aa6.28□□□□□ -1.4
RTN4-211ENST00000438462 ZNF506Q5JVG8 444 aa6.28□□□□□ -1.4
RTN4-211ENST00000438462 PARLQ9H300 379 aa6.28□□□□□ -1.4
RTN4-211ENST00000438462 GYG2O15488 501 aa6.27□□□□□ -1.41
RTN4-211ENST00000438462 SULT1A3P0DMM9 295 aa6.27□□□□□ -1.41
RTN4-211ENST00000438462 SULT1A4P0DMN0 295 aa6.27□□□□□ -1.41
RTN4-211ENST00000438462 HIST1H1EP10412 219 aaKnown RBP6.27□□□□□ -1.41
RTN4-211ENST00000438462 DNAL1Q4LDG9 190 aa6.27□□□□□ -1.41
RTN4-211ENST00000438462 ZNF486Q96H40 463 aaPredicted RBP6.27□□□□□ -1.41
RTN4-211ENST00000438462 KCNS1Q96KK3 526 aa6.27□□□□□ -1.41
RTN4-211ENST00000438462 DUSP21Q9H596 190 aa6.27□□□□□ -1.41
RTN4-211ENST00000438462 ACOT13Q9NPJ3 140 aa6.27□□□□□ -1.41
RTN4-211ENST00000438462 A0A087WZ39 114 aa6.26□□□□□ -1.41
RTN4-211ENST00000438462 TRBV6-8A0A0A6YYG3 113 aa6.26□□□□□ -1.41
RTN4-211ENST00000438462 CDS2O95674 445 aa6.26□□□□□ -1.41
RTN4-211ENST00000438462 TSHBP01222 138 aa6.26□□□□□ -1.41
RTN4-211ENST00000438462 PTTG1IPP53801 180 aa6.26□□□□□ -1.41
RTN4-211ENST00000438462 REG3AQ06141 175 aa6.26□□□□□ -1.41
RTN4-211ENST00000438462 KRTAP11-1Q8IUC1 163 aa6.26□□□□□ -1.41
RTN4-211ENST00000438462 CHCHD5Q9BSY4 110 aa6.26□□□□□ -1.41
RTN4-211ENST00000438462 MIXL1Q9H2W2 232 aa6.26□□□□□ -1.41
RTN4-211ENST00000438462 CACFD1Q9UGQ2 172 aa6.26□□□□□ -1.41
RTN4-211ENST00000438462 TRBV7-9A0A0J9YWB2 115 aa6.25□□□□□ -1.41
RTN4-211ENST00000438462 SMCO3A2RU48 225 aa6.25□□□□□ -1.41
RTN4-211ENST00000438462 PGPEP1LA6NFU8 196 aa6.25□□□□□ -1.41
RTN4-211ENST00000438462 GZMBP10144 247 aa6.25□□□□□ -1.41
RTN4-211ENST00000438462 IAPPP10997 89 aa6.25□□□□□ -1.41
RTN4-211ENST00000438462 RBX1P62877 108 aa6.25□□□□□ -1.41
RTN4-211ENST00000438462 ZNF674Q2M3X9 581 aa6.25□□□□□ -1.41
RTN4-211ENST00000438462 LAIR2Q6ISS4 152 aa6.25□□□□□ -1.41
RTN4-211ENST00000438462 LYSMD2Q8IV50 215 aa6.25□□□□□ -1.41
RTN4-211ENST00000438462 SELENOHQ8IZQ5 122 aaKnown RBP6.25□□□□□ -1.41
RTN4-211ENST00000438462 EXOC3-AS1Q8N2X6 119 aa6.25□□□□□ -1.41
RTN4-211ENST00000438462 LINC00304Q8N9R0 145 aa6.25□□□□□ -1.41
RTN4-211ENST00000438462 COPZ2Q9P299 210 aa6.25□□□□□ -1.41
RTN4-211ENST00000438462 PRELID1Q9Y255 219 aa6.25□□□□□ -1.41
RTN4-211ENST00000438462 A0A0A6YYH2 397 aa6.24□□□□□ -1.41
RTN4-211ENST00000438462 A6NJ64 397 aa6.24□□□□□ -1.41
RTN4-211ENST00000438462 PTTG1O95997 202 aa6.24□□□□□ -1.41
RTN4-211ENST00000438462 CAV2P51636 162 aa6.24□□□□□ -1.41
RTN4-211ENST00000438462 RAB2AP61019 212 aa6.24□□□□□ -1.41
RTN4-211ENST00000438462 PKIAP61925 76 aa6.24□□□□□ -1.41
RTN4-211ENST00000438462 GAGE2BQ13066 116 aa6.24□□□□□ -1.41
RTN4-211ENST00000438462 C9orf116Q5BN46 136 aaPredicted RBP6.24□□□□□ -1.41
RTN4-211ENST00000438462 TMEM268Q5VZI3 342 aa6.24□□□□□ -1.41
RTN4-211ENST00000438462 ZFP2Q6ZN57 461 aa6.24□□□□□ -1.41
RTN4-211ENST00000438462 OR5H6Q8NGV6 325 aa6.24□□□□□ -1.41
RTN4-211ENST00000438462 RAB2BQ8WUD1 216 aa6.24□□□□□ -1.41
RTN4-211ENST00000438462 FKBP14Q9NWM8 211 aa6.24□□□□□ -1.41
RTN4-211ENST00000438462 GPR98Q8WXG9 6306 aa6.23□□□□□ -1.41
RTN4-211ENST00000438462 TRAV8-4A0A0B4J246 113 aa6.23□□□□□ -1.41
RTN4-211ENST00000438462 NOTOA8MTQ0 251 aa6.23□□□□□ -1.41
RTN4-211ENST00000438462 P01737 135 aa6.23□□□□□ -1.41
RTN4-211ENST00000438462 SELENOTP62341 195 aa6.23□□□□□ -1.41
RTN4-211ENST00000438462 CFAP161Q6P656 301 aa6.23□□□□□ -1.41
RTN4-211ENST00000438462 TSKUQ8WUA8 353 aa6.23□□□□□ -1.41
RTN4-211ENST00000438462 PYDC1Q8WXC3 89 aa6.23□□□□□ -1.41
RTN4-211ENST00000438462 TRBV19A0A075B6N1 114 aa6.22□□□□□ -1.41
RTN4-211ENST00000438462 NDUFB4O95168 129 aa6.22□□□□□ -1.41
RTN4-211ENST00000438462 KRTAP19-6Q3LI70 58 aa6.22□□□□□ -1.41
RTN4-211ENST00000438462 GLYATL2Q8WU03 294 aa6.22□□□□□ -1.41
RTN4-211ENST00000438462 C9orf16Q9BUW7 83 aa6.22□□□□□ -1.41
RTN4-211ENST00000438462 GVQW2A0A096LPI5 108 aaPredicted RBP6.21□□□□□ -1.42
RTN4-211ENST00000438462 B3GALNT1O75752 331 aa6.21□□□□□ -1.42
RTN4-211ENST00000438462 UBE2D3P61077 147 aa6.21□□□□□ -1.42
RTN4-211ENST00000438462 UBE2D2P62837 147 aa6.21□□□□□ -1.42
RTN4-211ENST00000438462 C1orf146Q5VVC0 180 aa6.21□□□□□ -1.42
RTN4-211ENST00000438462 FP248Q71RG6 208 aaPredicted RBP6.21□□□□□ -1.42
RTN4-211ENST00000438462 CARD19Q96LW7 228 aa6.21□□□□□ -1.42
RTN4-211ENST00000438462 AGPAT2O15120 278 aa6.2□□□□□ -1.42
RTN4-211ENST00000438462 COX7A2P2O60397 106 aa6.2□□□□□ -1.42
RTN4-211ENST00000438462 MLLT11Q13015 90 aaPredicted RBP6.2□□□□□ -1.42
RTN4-211ENST00000438462 GAGE6Q13070 117 aa6.2□□□□□ -1.42
RTN4-211ENST00000438462 SMCO1Q147U7 214 aa6.2□□□□□ -1.42
RTN4-211ENST00000438462 UFSP1Q6NVU6 142 aa6.2□□□□□ -1.42
RTN4-211ENST00000438462 COX6B2Q6YFQ2 88 aa6.2□□□□□ -1.42
RTN4-211ENST00000438462 PRSS48Q7RTY5 328 aa6.2□□□□□ -1.42
RTN4-211ENST00000438462 ASB13Q8WXK3 278 aa6.2□□□□□ -1.42
RTN4-211ENST00000438462 SOSTQ9BQB4 213 aa6.2□□□□□ -1.42
RTN4-211ENST00000438462 KRTAP9-8Q9BYQ0 159 aa6.2□□□□□ -1.42
RTN4-211ENST00000438462 KMT2DO14686 5537 aa6.2□□□□□ -1.42
RTN4-211ENST00000438462 KRTAP2-3P0C7H8 128 aa6.19□□□□□ -1.42
RTN4-211ENST00000438462 SLC38A11Q08AI6 406 aa6.19□□□□□ -1.42
RTN4-211ENST00000438462 PXDC1Q5TGL8 231 aa6.19□□□□□ -1.42
RTN4-211ENST00000438462 C22orf42Q6IC83 251 aa6.19□□□□□ -1.42
RTN4-211ENST00000438462 OPRPNQ99935 248 aaPredicted RBP6.19□□□□□ -1.42
RTN4-211ENST00000438462 KRTAP2-4Q9BYR9 128 aa6.19□□□□□ -1.42
RTN4-211ENST00000438462 COMMD3Q9UBI1 195 aa6.19□□□□□ -1.42
RTN4-211ENST00000438462 IGLV8-61A0A075B6I0 122 aa6.18□□□□□ -1.42
RTN4-211ENST00000438462 GAGE12HA6NDE8 117 aa6.18□□□□□ -1.42
RTN4-211ENST00000438462 A8MWV9 139 aa6.18□□□□□ -1.42
RTN4-211ENST00000438462 AKR1C4P17516 323 aa6.18□□□□□ -1.42
RTN4-211ENST00000438462 KRTAP13-2Q52LG2 175 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 188 ms