RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 IGHV3-11P01762 117 aa12.16□□□□□ -0.46
HLA-DQB2-231ENST00000435145 SMIM17P0DL12 118 aa12.16□□□□□ -0.46
HLA-DQB2-231ENST00000435145 MED14OSP0DP75 135 aa12.16□□□□□ -0.46
HLA-DQB2-231ENST00000435145 LAGE3Q14657 143 aa12.16□□□□□ -0.46
HLA-DQB2-231ENST00000435145 PCP2Q8IVA1 136 aa12.16□□□□□ -0.46
HLA-DQB2-231ENST00000435145 A0A0G2JLM5 398 aa12.16□□□□□ -0.46
HLA-DQB2-231ENST00000435145 PF4V1P10720 104 aa12.16□□□□□ -0.46
HLA-DQB2-231ENST00000435145 PKD1L2Q7Z442 2459 aa12.15□□□□□ -0.46
HLA-DQB2-231ENST00000435145 ERASQ7Z444 233 aa12.15□□□□□ -0.46
HLA-DQB2-231ENST00000435145 PRSS1P07477 247 aa12.15□□□□□ -0.47
HLA-DQB2-231ENST00000435145 OR4C5Q8NGB2 326 aa12.15□□□□□ -0.47
HLA-DQB2-231ENST00000435145 RHPN1-AS1Q9BWJ2 59 aa12.15□□□□□ -0.47
HLA-DQB2-231ENST00000435145 PEF1Q9UBV8 284 aaKnown RBP12.15□□□□□ -0.47
HLA-DQB2-231ENST00000435145 SVEP1Q4LDE5 3571 aa12.14□□□□□ -0.47
HLA-DQB2-231ENST00000435145 C7orf71A4D174 169 aa12.14□□□□□ -0.47
HLA-DQB2-231ENST00000435145 IGKCP01834 107 aa12.14□□□□□ -0.47
HLA-DQB2-231ENST00000435145 NMUP48645 174 aa12.14□□□□□ -0.47
HLA-DQB2-231ENST00000435145 DEFB1P60022 68 aa12.14□□□□□ -0.47
HLA-DQB2-231ENST00000435145 FOXC2Q99958 501 aa12.14□□□□□ -0.47
HLA-DQB2-231ENST00000435145 SMIM2Q9BVW6 85 aa12.14□□□□□ -0.47
HLA-DQB2-231ENST00000435145 TRAV8-6A0A0B4J262 113 aa12.13□□□□□ -0.47
HLA-DQB2-231ENST00000435145 DPM2O94777 84 aa12.13□□□□□ -0.47
HLA-DQB2-231ENST00000435145 AVPP01185 164 aa12.13□□□□□ -0.47
HLA-DQB2-231ENST00000435145 ASIPP42127 132 aa12.13□□□□□ -0.47
HLA-DQB2-231ENST00000435145 SRSF1Q07955 248 aaKnown RBP eCLIP12.13□□□□□ -0.47
HLA-DQB2-231ENST00000435145 AMMECR1LQ6DCA0 310 aa12.13□□□□□ -0.47
HLA-DQB2-231ENST00000435145 DAZ1Q9NQZ3 744 aaKnown RBP12.13□□□□□ -0.47
HLA-DQB2-231ENST00000435145 IGKV2D-26A0A0A0MRZ7 120 aa12.13□□□□□ -0.47
HLA-DQB2-231ENST00000435145 K7EMT4 169 aa12.13□□□□□ -0.47
HLA-DQB2-231ENST00000435145 HLA-DRB4P13762 266 aa12.13□□□□□ -0.47
HLA-DQB2-231ENST00000435145 TCTAP57738 103 aa12.13□□□□□ -0.47
HLA-DQB2-231ENST00000435145 ANXA2RQ3ZCQ2 193 aa12.13□□□□□ -0.47
HLA-DQB2-231ENST00000435145 TM4SF20Q53R12 229 aa12.13□□□□□ -0.47
HLA-DQB2-231ENST00000435145 LCNL1Q6ZST4 164 aa12.13□□□□□ -0.47
HLA-DQB2-231ENST00000435145 HIGD1BQ9P298 99 aa12.13□□□□□ -0.47
HLA-DQB2-231ENST00000435145 HLA-DRB4X5D2U9 266 aa12.13□□□□□ -0.47
HLA-DQB2-231ENST00000435145 A6NDN8 102 aa12.12□□□□□ -0.47
HLA-DQB2-231ENST00000435145 B4DSR2 109 aa12.12□□□□□ -0.47
HLA-DQB2-231ENST00000435145 H3BRM9 83 aa12.12□□□□□ -0.47
HLA-DQB2-231ENST00000435145 RNASE8Q8TDE3 154 aaKnown RBP12.12□□□□□ -0.47
HLA-DQB2-231ENST00000435145 F6UB75 175 aa12.11□□□□□ -0.47
HLA-DQB2-231ENST00000435145 J3KRW8 73 aa12.11□□□□□ -0.47
HLA-DQB2-231ENST00000435145 NXPH4O95158 308 aa12.11□□□□□ -0.47
HLA-DQB2-231ENST00000435145 MYOZ3Q8TDC0 251 aa12.11□□□□□ -0.47
HLA-DQB2-231ENST00000435145 RASL10AQ92737 203 aa12.11□□□□□ -0.47
HLA-DQB2-231ENST00000435145 C20orf78Q9BR46 151 aa12.11□□□□□ -0.47
HLA-DQB2-231ENST00000435145 DPH3P1Q9H4G8 78 aa12.11□□□□□ -0.47
HLA-DQB2-231ENST00000435145 TMEM8BA6NDV4 472 aa12.11□□□□□ -0.47
HLA-DQB2-231ENST00000435145 M0R381 172 aa12.11□□□□□ -0.47
HLA-DQB2-231ENST00000435145 GATA3P23771 443 aa12.11□□□□□ -0.47
HLA-DQB2-231ENST00000435145 POM121L12Q8N7R1 296 aa12.11□□□□□ -0.47
HLA-DQB2-231ENST00000435145 A0A087WX48 190 aa12.1□□□□□ -0.47
HLA-DQB2-231ENST00000435145 KLLNB2CW77 178 aa12.1□□□□□ -0.47
HLA-DQB2-231ENST00000435145 RNF223E7ERA6 249 aa12.1□□□□□ -0.47
HLA-DQB2-231ENST00000435145 K7EMI3 77 aa12.1□□□□□ -0.47
HLA-DQB2-231ENST00000435145 RNASE3P12724 160 aaKnown RBP12.1□□□□□ -0.47
HLA-DQB2-231ENST00000435145 RNASE4P34096 147 aaKnown RBP12.1□□□□□ -0.47
HLA-DQB2-231ENST00000435145 RPL11P62913 178 aaKnown RBP12.1□□□□□ -0.47
HLA-DQB2-231ENST00000435145 SPOCK3Q9BQ16 436 aa12.1□□□□□ -0.47
HLA-DQB2-231ENST00000435145 SPTAN1Q13813 2472 aaKnown RBP12.1□□□□□ -0.47
HLA-DQB2-231ENST00000435145 C9orf118A6NHY6 69 aa12.1□□□□□ -0.47
HLA-DQB2-231ENST00000435145 SLC25A16P16260 332 aa12.1□□□□□ -0.47
HLA-DQB2-231ENST00000435145 S100A4P26447 101 aaKnown RBP12.1□□□□□ -0.47
HLA-DQB2-231ENST00000435145 DSCR9P59020 149 aa12.1□□□□□ -0.47
HLA-DQB2-231ENST00000435145 SUMO2P61956 95 aaKnown RBP12.1□□□□□ -0.47
HLA-DQB2-231ENST00000435145 MRPL35Q9NZE8 188 aaKnown RBP12.1□□□□□ -0.47
HLA-DQB2-231ENST00000435145 USP24Q9UPU5 2620 aa12.1□□□□□ -0.47
HLA-DQB2-231ENST00000435145 PHLDA3Q9Y5J5 127 aa12.1□□□□□ -0.47
HLA-DQB2-231ENST00000435145 TRAV12-1A0A0B4J245 112 aa12.09□□□□□ -0.47
HLA-DQB2-231ENST00000435145 PSMB8P28062 276 aa12.09□□□□□ -0.47
HLA-DQB2-231ENST00000435145 CBY1Q9Y3M2 126 aa12.09□□□□□ -0.47
HLA-DQB2-231ENST00000435145 SPRY2O43597 315 aa12.08□□□□□ -0.48
HLA-DQB2-231ENST00000435145 ORMDL2Q53FV1 153 aa12.08□□□□□ -0.48
HLA-DQB2-231ENST00000435145 ZC2HC1BQ5TFG8 222 aa12.08□□□□□ -0.48
HLA-DQB2-231ENST00000435145 SAMD13Q5VXD3 122 aa12.08□□□□□ -0.48
HLA-DQB2-231ENST00000435145 DCANP1Q8TF63 244 aa12.08□□□□□ -0.48
HLA-DQB2-231ENST00000435145 GNRH2O43555 120 aa12.08□□□□□ -0.48
HLA-DQB2-231ENST00000435145 RBX1P62877 108 aa12.08□□□□□ -0.48
HLA-DQB2-231ENST00000435145 C14orf178Q8N769 122 aaPredicted RBP12.08□□□□□ -0.48
HLA-DQB2-231ENST00000435145 TOMM6Q96B49 74 aa12.08□□□□□ -0.48
HLA-DQB2-231ENST00000435145 EDN2P20800 178 aa12.07□□□□□ -0.48
HLA-DQB2-231ENST00000435145 UFSP1Q6NVU6 142 aa12.07□□□□□ -0.48
HLA-DQB2-231ENST00000435145 GTSCR1Q86UQ5 136 aa12.07□□□□□ -0.48
HLA-DQB2-231ENST00000435145 CFAP46Q8IYW2 2715 aa12.07□□□□□ -0.48
HLA-DQB2-231ENST00000435145 DOPEY1Q5JWR5 2465 aa12.07□□□□□ -0.48
HLA-DQB2-231ENST00000435145 TMEM89A2RUT3 159 aa12.06□□□□□ -0.48
HLA-DQB2-231ENST00000435145 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.06□□□□□ -0.48
HLA-DQB2-231ENST00000435145 PLNP26678 52 aa12.06□□□□□ -0.48
HLA-DQB2-231ENST00000435145 RPL39LQ96EH5 51 aaKnown RBP12.06□□□□□ -0.48
HLA-DQB2-231ENST00000435145 AP1S3Q96PC3 154 aa12.06□□□□□ -0.48
HLA-DQB2-231ENST00000435145 JMJD8Q96S16 334 aa12.06□□□□□ -0.48
HLA-DQB2-231ENST00000435145 TTTY13Q9BZ97 58 aa12.06□□□□□ -0.48
HLA-DQB2-231ENST00000435145 TMEM160Q9NX00 188 aa12.06□□□□□ -0.48
HLA-DQB2-231ENST00000435145 KIF25-AS1Q9Y6Z4 181 aa12.06□□□□□ -0.48
HLA-DQB2-231ENST00000435145 EPG5Q9HCE0 2579 aa12.06□□□□□ -0.48
HLA-DQB2-231ENST00000435145 IGKV3-7A0A075B6H7 116 aa12.06□□□□□ -0.48
HLA-DQB2-231ENST00000435145 ID1P41134 155 aa12.06□□□□□ -0.48
HLA-DQB2-231ENST00000435145 LINC00315P59091 139 aa12.06□□□□□ -0.48
HLA-DQB2-231ENST00000435145 TMEM95Q3KNT9 176 aa12.06□□□□□ -0.48
HLA-DQB2-231ENST00000435145 TRBV25-1A0A075B6N4 114 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms