RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 ORM1P02763 201 aa8.3□□□□□ -1.08
LINC00539-203ENST00000434601 RNASE4P34096 147 aaKnown RBP8.3□□□□□ -1.08
LINC00539-203ENST00000434601 KIR3DS1Q14943 382 aa8.3□□□□□ -1.08
LINC00539-203ENST00000434601 GFI1BQ5VTD9 330 aa8.3□□□□□ -1.08
LINC00539-203ENST00000434601 FAM210BQ96KR6 192 aa8.3□□□□□ -1.08
LINC00539-203ENST00000434601 CLUHP3Q96NS8 147 aa8.3□□□□□ -1.08
LINC00539-203ENST00000434601 PYGO2Q9BRQ0 406 aa8.3□□□□□ -1.08
LINC00539-203ENST00000434601 GFRA4Q9GZZ7 299 aa8.3□□□□□ -1.08
LINC00539-203ENST00000434601 C19orf73Q9NVV2 129 aa8.3□□□□□ -1.08
LINC00539-203ENST00000434601 NAT8BQ9UHF3 227 aa8.3□□□□□ -1.08
LINC00539-203ENST00000434601 U3KQK5 164 aa8.3□□□□□ -1.08
LINC00539-203ENST00000434601 STAB2Q8WWQ8 2551 aa8.29□□□□□ -1.08
LINC00539-203ENST00000434601 TMSB15BA0A087X1C1 80 aa8.29□□□□□ -1.08
LINC00539-203ENST00000434601 FAM231BA6NCW3 169 aa8.29□□□□□ -1.08
LINC00539-203ENST00000434601 HIGD1CA8MV81 97 aa8.29□□□□□ -1.08
LINC00539-203ENST00000434601 GZMBP10144 247 aa8.29□□□□□ -1.08
LINC00539-203ENST00000434601 TRPT1Q86TN4 253 aaKnown RBP8.29□□□□□ -1.08
LINC00539-203ENST00000434601 GTSCR1Q86UQ5 136 aa8.29□□□□□ -1.08
LINC00539-203ENST00000434601 NUP35Q8NFH5 326 aa8.29□□□□□ -1.08
LINC00539-203ENST00000434601 GTSF1Q8WW33 167 aa8.29□□□□□ -1.08
LINC00539-203ENST00000434601 WFDC10AQ9H1F0 79 aa8.29□□□□□ -1.08
LINC00539-203ENST00000434601 C11orf21Q9P2W6 132 aa8.29□□□□□ -1.08
LINC00539-203ENST00000434601 NAGKQ9UJ70 344 aa8.29□□□□□ -1.08
LINC00539-203ENST00000434601 TRAV12-2A0A075B6T6 113 aa8.28□□□□□ -1.08
LINC00539-203ENST00000434601 IGKV3D-20A0A0C4DH25 116 aa8.28□□□□□ -1.08
LINC00539-203ENST00000434601 RAB5AP20339 215 aa8.28□□□□□ -1.08
LINC00539-203ENST00000434601 FXYD7P58549 80 aa8.28□□□□□ -1.08
LINC00539-203ENST00000434601 Q6ZQT7 251 aa8.28□□□□□ -1.08
LINC00539-203ENST00000434601 AGRNO00468 2067 aa8.27□□□□□ -1.09
LINC00539-203ENST00000434601 TRAV12-3A0A0B4J271 114 aa8.27□□□□□ -1.09
LINC00539-203ENST00000434601 C3orf84H3BNL1 204 aa8.27□□□□□ -1.09
LINC00539-203ENST00000434601 AMBPP02760 352 aa8.27□□□□□ -1.09
LINC00539-203ENST00000434601 TYMSP04818 313 aa8.27□□□□□ -1.09
LINC00539-203ENST00000434601 CRXO43186 299 aaPredicted RBP8.26□□□□□ -1.09
LINC00539-203ENST00000434601 SPINK4O60575 86 aa8.26□□□□□ -1.09
LINC00539-203ENST00000434601 ZNF324O75467 553 aaPredicted RBP8.26□□□□□ -1.09
LINC00539-203ENST00000434601 IGLC6P0CF74 106 aa8.26□□□□□ -1.09
LINC00539-203ENST00000434601 CTRLP40313 264 aa8.26□□□□□ -1.09
LINC00539-203ENST00000434601 FOXA3P55318 350 aaPredicted RBP8.26□□□□□ -1.09
LINC00539-203ENST00000434601 ANXA2RQ3ZCQ2 193 aa8.26□□□□□ -1.09
LINC00539-203ENST00000434601 MUC21Q5SSG8 566 aa8.26□□□□□ -1.09
LINC00539-203ENST00000434601 MRPL54Q6P161 138 aaKnown RBP8.26□□□□□ -1.09
LINC00539-203ENST00000434601 ATP5L2Q7Z4Y8 100 aa8.26□□□□□ -1.09
LINC00539-203ENST00000434601 FER1L6-AS1Q8NA97 138 aa8.26□□□□□ -1.09
LINC00539-203ENST00000434601 PGLYRP4Q96LB8 373 aa8.26□□□□□ -1.09
LINC00539-203ENST00000434601 SRD5A3Q9H8P0 318 aa8.26□□□□□ -1.09
LINC00539-203ENST00000434601 GRIFINA4D1Z8 144 aa8.25□□□□□ -1.09
LINC00539-203ENST00000434601 INSP01308 110 aa8.25□□□□□ -1.09
LINC00539-203ENST00000434601 RBMY1A1P0DJD3 496 aaKnown RBP8.25□□□□□ -1.09
LINC00539-203ENST00000434601 RBMY1CP0DJD4 496 aa8.25□□□□□ -1.09
LINC00539-203ENST00000434601 RPS10P46783 165 aaKnown RBP8.25□□□□□ -1.09
LINC00539-203ENST00000434601 NUTF2P61970 127 aaKnown RBP8.25□□□□□ -1.09
LINC00539-203ENST00000434601 RBMY1FQ15415 496 aaKnown RBP8.25□□□□□ -1.09
LINC00539-203ENST00000434601 FAM159AQ6UWV7 190 aa8.25□□□□□ -1.09
LINC00539-203ENST00000434601 ZNF575Q86XF7 245 aa8.25□□□□□ -1.09
LINC00539-203ENST00000434601 DEFB125Q8N687 156 aa8.25□□□□□ -1.09
LINC00539-203ENST00000434601 BORCS7Q96B45 105 aa8.25□□□□□ -1.09
LINC00539-203ENST00000434601 KCNS1Q96KK3 526 aa8.25□□□□□ -1.09
LINC00539-203ENST00000434601 C20orf144Q9BQM9 153 aa8.25□□□□□ -1.09
LINC00539-203ENST00000434601 TPPP3Q9BW30 176 aa8.25□□□□□ -1.09
LINC00539-203ENST00000434601 A0A1B0GXF2 115 aa8.24□□□□□ -1.09
LINC00539-203ENST00000434601 RPL35AP18077 110 aaKnown RBP8.24□□□□□ -1.09
LINC00539-203ENST00000434601 ASIPP42127 132 aa8.24□□□□□ -1.09
LINC00539-203ENST00000434601 TDRG1Q3Y452 100 aa8.24□□□□□ -1.09
LINC00539-203ENST00000434601 COX19Q49B96 90 aa8.24□□□□□ -1.09
LINC00539-203ENST00000434601 MORN3Q6PF18 240 aaPredicted RBP8.24□□□□□ -1.09
LINC00539-203ENST00000434601 RASL11AQ6T310 242 aa8.24□□□□□ -1.09
LINC00539-203ENST00000434601 LYZL1Q6UWQ5 148 aa8.24□□□□□ -1.09
LINC00539-203ENST00000434601 DNAH9Q9NYC9 4486 aa8.24□□□□□ -1.09
LINC00539-203ENST00000434601 RYR3Q15413 4870 aa8.24□□□□□ -1.09
LINC00539-203ENST00000434601 IGHV1OR15-1A0A075B7D0 117 aa8.23□□□□□ -1.09
LINC00539-203ENST00000434601 A0A1B0GUT8 65 aa8.23□□□□□ -1.09
LINC00539-203ENST00000434601 H3BVH4 76 aa8.23□□□□□ -1.09
LINC00539-203ENST00000434601 ARMS2P0C7Q2 107 aa8.23□□□□□ -1.09
LINC00539-203ENST00000434601 MED14OSP0DP75 135 aa8.23□□□□□ -1.09
LINC00539-203ENST00000434601 HBBP68871 147 aa8.23□□□□□ -1.09
LINC00539-203ENST00000434601 RIGQ13278 110 aa8.23□□□□□ -1.09
LINC00539-203ENST00000434601 DNLZQ5SXM8 178 aa8.23□□□□□ -1.09
LINC00539-203ENST00000434601 WDR73Q6P4I2 378 aa8.23□□□□□ -1.09
LINC00539-203ENST00000434601 XCL2Q9UBD3 114 aa8.23□□□□□ -1.09
LINC00539-203ENST00000434601 SNURFLB1AK76 121 aa8.22□□□□□ -1.09
LINC00539-203ENST00000434601 F2Z2F3 143 aa8.22□□□□□ -1.09
LINC00539-203ENST00000434601 SNAI2O43623 268 aa8.22□□□□□ -1.09
LINC00539-203ENST00000434601 OR5AL1P0C617 328 aa8.22□□□□□ -1.09
LINC00539-203ENST00000434601 FRMD6-AS1P0C7T7 363 aa8.22□□□□□ -1.09
LINC00539-203ENST00000434601 S100A4P26447 101 aaKnown RBP8.22□□□□□ -1.09
LINC00539-203ENST00000434601 Q8N1Y9 231 aa8.22□□□□□ -1.09
LINC00539-203ENST00000434601 C1QTNF4Q9BXJ3 329 aa8.22□□□□□ -1.09
LINC00539-203ENST00000434601 GNB1LQ9BYB4 327 aa8.22□□□□□ -1.09
LINC00539-203ENST00000434601 CNFNQ9BYD5 112 aa8.22□□□□□ -1.09
LINC00539-203ENST00000434601 TMA7Q9Y2S6 64 aaKnown RBP8.22□□□□□ -1.09
LINC00539-203ENST00000434601 TRGV11A0A075B6L2 103 aa8.21□□□□□ -1.1
LINC00539-203ENST00000434601 A0A1B0GW15 77 aa8.21□□□□□ -1.1
LINC00539-203ENST00000434601 C1orf196B1AJZ1 125 aa8.21□□□□□ -1.1
LINC00539-203ENST00000434601 GNRH2O43555 120 aa8.21□□□□□ -1.1
LINC00539-203ENST00000434601 HLA-DQA1P01909 254 aa8.21□□□□□ -1.1
LINC00539-203ENST00000434601 MT-ND6P03923 174 aa8.21□□□□□ -1.1
LINC00539-203ENST00000434601 TRGC2P03986 189 aa8.21□□□□□ -1.1
LINC00539-203ENST00000434601 S100A8P05109 93 aa8.21□□□□□ -1.1
LINC00539-203ENST00000434601 RNASE3P12724 160 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms