RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 PCSK5Q92824 1860 aa5.79□□□□□ -1.48
SYNPO2-203ENST00000434046 H7C1H1 209 aa5.79□□□□□ -1.48
SYNPO2-203ENST00000434046 IGKV1-17P01599 117 aa5.79□□□□□ -1.48
SYNPO2-203ENST00000434046 HERVK_113P61574 105 aa5.79□□□□□ -1.48
SYNPO2-203ENST00000434046 SRSF1Q07955 248 aaKnown RBP eCLIP5.79□□□□□ -1.48
SYNPO2-203ENST00000434046 TMEM170BQ5T4T1 132 aa5.79□□□□□ -1.48
SYNPO2-203ENST00000434046 KIR2DL4Q99706 377 aa5.79□□□□□ -1.48
SYNPO2-203ENST00000434046 PRADC1Q9BSG0 188 aa5.79□□□□□ -1.48
SYNPO2-203ENST00000434046 SMG1Q96Q15 3661 aaKnown RBP5.79□□□□□ -1.48
SYNPO2-203ENST00000434046 TMEM262E9PQX1 116 aa5.78□□□□□ -1.48
SYNPO2-203ENST00000434046 GNLYP22749 145 aa5.78□□□□□ -1.48
SYNPO2-203ENST00000434046 MFAP4P55083 255 aa5.78□□□□□ -1.48
SYNPO2-203ENST00000434046 ATP5J2P56134 94 aa5.78□□□□□ -1.48
SYNPO2-203ENST00000434046 Q8N8P6 123 aa5.78□□□□□ -1.48
SYNPO2-203ENST00000434046 IGHV3OR16-10A0A075B7F0 116 aa5.78□□□□□ -1.48
SYNPO2-203ENST00000434046 IGHV4-39P01824 125 aa5.78□□□□□ -1.48
SYNPO2-203ENST00000434046 ZNF688P0C7X2 276 aa5.78□□□□□ -1.48
SYNPO2-203ENST00000434046 HERV-K104P63124 156 aa5.78□□□□□ -1.48
SYNPO2-203ENST00000434046 PVRIGQ6DKI7 326 aa5.78□□□□□ -1.48
SYNPO2-203ENST00000434046 LYPD1Q8N2G4 141 aa5.78□□□□□ -1.48
SYNPO2-203ENST00000434046 PHLDA1Q8WV24 401 aaPredicted RBP5.78□□□□□ -1.48
SYNPO2-203ENST00000434046 CITED2Q99967 270 aaPredicted RBP5.78□□□□□ -1.48
SYNPO2-203ENST00000434046 SPXQ9BT56 116 aa5.78□□□□□ -1.48
SYNPO2-203ENST00000434046 A0A087WX48 190 aa5.78□□□□□ -1.48
SYNPO2-203ENST00000434046 H3BRN7 92 aa5.78□□□□□ -1.48
SYNPO2-203ENST00000434046 BUB1B-PAK6H3BSN5 160 aa5.78□□□□□ -1.48
SYNPO2-203ENST00000434046 NBR2O15453 112 aa5.78□□□□□ -1.48
SYNPO2-203ENST00000434046 IGLV2-23P01705 113 aa5.78□□□□□ -1.48
SYNPO2-203ENST00000434046 KLHL30-AS1Q8NEE0 82 aa5.78□□□□□ -1.48
SYNPO2-203ENST00000434046 ERG28Q9UKR5 140 aa5.78□□□□□ -1.48
SYNPO2-203ENST00000434046 F8VRH5 84 aa5.77□□□□□ -1.49
SYNPO2-203ENST00000434046 SPRY2O43597 315 aa5.77□□□□□ -1.49
SYNPO2-203ENST00000434046 ZNF80P51504 273 aaPredicted RBP5.77□□□□□ -1.49
SYNPO2-203ENST00000434046 DLX6P56179 175 aa5.77□□□□□ -1.49
SYNPO2-203ENST00000434046 C3orf56Q8N813 242 aa5.77□□□□□ -1.49
SYNPO2-203ENST00000434046 ZNF491Q8N8L2 437 aa5.77□□□□□ -1.49
SYNPO2-203ENST00000434046 PIMREGQ9BSJ6 248 aa5.77□□□□□ -1.49
SYNPO2-203ENST00000434046 VCX2Q9H322 139 aa5.77□□□□□ -1.49
SYNPO2-203ENST00000434046 KAAG1Q9UBP8 84 aa5.77□□□□□ -1.49
SYNPO2-203ENST00000434046 CFAP47Q6ZTR5 3102 aa5.77□□□□□ -1.49
SYNPO2-203ENST00000434046 SPENQ96T58 3664 aaKnown RBP5.77□□□□□ -1.49
SYNPO2-203ENST00000434046 F5H697 171 aa5.77□□□□□ -1.49
SYNPO2-203ENST00000434046 CRYGCP07315 174 aa5.77□□□□□ -1.49
SYNPO2-203ENST00000434046 TEN1Q86WV5 123 aa5.77□□□□□ -1.49
SYNPO2-203ENST00000434046 IGFBPL1Q8WX77 278 aa5.77□□□□□ -1.49
SYNPO2-203ENST00000434046 ZNF292O60281 2723 aa5.77□□□□□ -1.49
SYNPO2-203ENST00000434046 GAGE12JA6NER3 117 aa5.77□□□□□ -1.49
SYNPO2-203ENST00000434046 GAGE7O76087 117 aa5.77□□□□□ -1.49
SYNPO2-203ENST00000434046 TRGV3P03979 118 aa5.77□□□□□ -1.49
SYNPO2-203ENST00000434046 GAGE12FP0CL80 117 aa5.77□□□□□ -1.49
SYNPO2-203ENST00000434046 GAGE12GP0CL81 117 aa5.77□□□□□ -1.49
SYNPO2-203ENST00000434046 GAGE12IP0CL82 117 aa5.77□□□□□ -1.49
SYNPO2-203ENST00000434046 GAGE4Q13068 117 aa5.77□□□□□ -1.49
SYNPO2-203ENST00000434046 RNF182Q8N6D2 247 aa5.77□□□□□ -1.49
SYNPO2-203ENST00000434046 U3KQK5 164 aa5.77□□□□□ -1.49
SYNPO2-203ENST00000434046 LINC01559Q495D7 138 aa5.76□□□□□ -1.49
SYNPO2-203ENST00000434046 NFE4Q86UQ8 179 aa5.76□□□□□ -1.49
SYNPO2-203ENST00000434046 LINC00311Q8N616 119 aa5.76□□□□□ -1.49
SYNPO2-203ENST00000434046 ANKRD29Q8N6D5 301 aa5.76□□□□□ -1.49
SYNPO2-203ENST00000434046 IGKV3-7A0A075B6H7 116 aa5.76□□□□□ -1.49
SYNPO2-203ENST00000434046 PRSS2P07478 247 aa5.76□□□□□ -1.49
SYNPO2-203ENST00000434046 OR11H6Q8NGC7 330 aa5.76□□□□□ -1.49
SYNPO2-203ENST00000434046 CDIP1Q9H305 208 aa5.76□□□□□ -1.49
SYNPO2-203ENST00000434046 C21orf62Q9NYP8 219 aa5.76□□□□□ -1.49
SYNPO2-203ENST00000434046 IGHV3-64A0A075B6Q5 118 aa5.76□□□□□ -1.49
SYNPO2-203ENST00000434046 INS-IGF2F8WCM5 200 aa5.76□□□□□ -1.49
SYNPO2-203ENST00000434046 CFAP126Q5VTH2 177 aa5.76□□□□□ -1.49
SYNPO2-203ENST00000434046 IL17RELQ6ZVW7 336 aa5.76□□□□□ -1.49
SYNPO2-203ENST00000434046 CCL19Q99731 98 aa5.76□□□□□ -1.49
SYNPO2-203ENST00000434046 TSPAN13O95857 204 aa5.75□□□□□ -1.49
SYNPO2-203ENST00000434046 LGALS1P09382 135 aaKnown RBP5.75□□□□□ -1.49
SYNPO2-203ENST00000434046 LGALS3P17931 250 aaKnown RBP5.75□□□□□ -1.49
SYNPO2-203ENST00000434046 LAMA5O15230 3695 aa5.75□□□□□ -1.49
SYNPO2-203ENST00000434046 TRAV2A0A0B4J234 112 aa5.75□□□□□ -1.49
SYNPO2-203ENST00000434046 I3L2K1 104 aa5.75□□□□□ -1.49
SYNPO2-203ENST00000434046 SLC25A20O43772 301 aa5.75□□□□□ -1.49
SYNPO2-203ENST00000434046 NTN5Q8WTR8 489 aaPredicted RBP5.75□□□□□ -1.49
SYNPO2-203ENST00000434046 PHLDA3Q9Y5J5 127 aa5.75□□□□□ -1.49
SYNPO2-203ENST00000434046 TRAV8-4A0A0B4J246 113 aa5.75□□□□□ -1.49
SYNPO2-203ENST00000434046 TCL1BO95988 128 aa5.75□□□□□ -1.49
SYNPO2-203ENST00000434046 PDE6HQ13956 83 aa5.75□□□□□ -1.49
SYNPO2-203ENST00000434046 VMO1Q7Z5L0 202 aa5.75□□□□□ -1.49
SYNPO2-203ENST00000434046 CFHR4Q92496 578 aa5.75□□□□□ -1.49
SYNPO2-203ENST00000434046 RNF185Q96GF1 192 aa5.75□□□□□ -1.49
SYNPO2-203ENST00000434046 M0R1W7 72 aa5.74□□□□□ -1.49
SYNPO2-203ENST00000434046 IFITM1P13164 125 aa5.74□□□□□ -1.49
SYNPO2-203ENST00000434046 ADORA2A-AS1P86434 159 aa5.74□□□□□ -1.49
SYNPO2-203ENST00000434046 LY6EQ16553 131 aa5.74□□□□□ -1.49
SYNPO2-203ENST00000434046 ORMDL2Q53FV1 153 aa5.74□□□□□ -1.49
SYNPO2-203ENST00000434046 MORN3Q6PF18 240 aaPredicted RBP5.74□□□□□ -1.49
SYNPO2-203ENST00000434046 DYNAPQ8N1N2 210 aa5.74□□□□□ -1.49
SYNPO2-203ENST00000434046 PLEKHB2Q96CS7 222 aa5.74□□□□□ -1.49
SYNPO2-203ENST00000434046 RNF5Q99942 180 aa5.74□□□□□ -1.49
SYNPO2-203ENST00000434046 BPESC1Q9GZL8 116 aa5.74□□□□□ -1.49
SYNPO2-203ENST00000434046 K7EIM0 57 aa5.74□□□□□ -1.49
SYNPO2-203ENST00000434046 C5orf64Q2M2E5 130 aa5.74□□□□□ -1.49
SYNPO2-203ENST00000434046 C2orf66Q6UXQ4 117 aa5.74□□□□□ -1.49
SYNPO2-203ENST00000434046 C14orf178Q8N769 122 aaPredicted RBP5.74□□□□□ -1.49
SYNPO2-203ENST00000434046 ATP6V0E2Q8NHE4 81 aa5.74□□□□□ -1.49
SYNPO2-203ENST00000434046 PRO0461Q9UI25 63 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms