RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 TNS1Q9HBL0 1735 aaKnown RBP-0.58□□□□□ -2.5
LINC01239-201ENST00000433645 MACF1Q9UPN3 7388 aaKnown RBP-0.58□□□□□ -2.5
LINC01239-201ENST00000433645 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.58□□□□□ -2.5
LINC01239-201ENST00000433645 TRBV7-6A0A0J9YX20 115 aa-0.58□□□□□ -2.5
LINC01239-201ENST00000433645 C10orf142B7Z368 130 aa-0.58□□□□□ -2.5
LINC01239-201ENST00000433645 EDF1O60869 148 aaKnown RBP-0.58□□□□□ -2.5
LINC01239-201ENST00000433645 SDC4P31431 198 aa-0.58□□□□□ -2.5
LINC01239-201ENST00000433645 GTF2A1P52655 376 aaPredicted RBP-0.58□□□□□ -2.5
LINC01239-201ENST00000433645 TAS2R41P59536 307 aa-0.58□□□□□ -2.5
LINC01239-201ENST00000433645 COX6A2Q02221 97 aa-0.58□□□□□ -2.5
LINC01239-201ENST00000433645 IDO2Q6ZQW0 420 aa-0.58□□□□□ -2.5
LINC01239-201ENST00000433645 LINC00305Q7Z4B0 112 aa-0.58□□□□□ -2.5
LINC01239-201ENST00000433645 SMIM7Q9BQ49 75 aa-0.58□□□□□ -2.5
LINC01239-201ENST00000433645 SYNMO15061 1565 aa-0.58□□□□□ -2.5
LINC01239-201ENST00000433645 F5P12259 2224 aa-0.58□□□□□ -2.5
LINC01239-201ENST00000433645 CDK13Q14004 1512 aaKnown RBP-0.59□□□□□ -2.5
LINC01239-201ENST00000433645 LSM3P62310 102 aaKnown RBP-0.59□□□□□ -2.5
LINC01239-201ENST00000433645 PPP1R1CQ8WVI7 109 aa-0.59□□□□□ -2.5
LINC01239-201ENST00000433645 DYDC1Q8WWB3 177 aa-0.59□□□□□ -2.5
LINC01239-201ENST00000433645 FKBP11Q9NYL4 201 aa-0.59□□□□□ -2.5
LINC01239-201ENST00000433645 PTPRGP23470 1445 aa-0.59□□□□□ -2.5
LINC01239-201ENST00000433645 FER1L6Q2WGJ9 1857 aa-0.6□□□□□ -2.51
LINC01239-201ENST00000433645 TRAV13-1A0A0B4J241 112 aa-0.6□□□□□ -2.51
LINC01239-201ENST00000433645 TEX49A0A1B0GTD5 131 aa-0.6□□□□□ -2.51
LINC01239-201ENST00000433645 IGKCP01834 107 aa-0.6□□□□□ -2.51
LINC01239-201ENST00000433645 SLC25A4P12235 298 aa-0.6□□□□□ -2.51
LINC01239-201ENST00000433645 S100A11P31949 105 aa-0.6□□□□□ -2.51
LINC01239-201ENST00000433645 LXNQ9BS40 222 aa-0.6□□□□□ -2.51
LINC01239-201ENST00000433645 PTPN13Q12923 2485 aa-0.61□□□□□ -2.51
LINC01239-201ENST00000433645 TRAV12-2A0A075B6T6 113 aa-0.61□□□□□ -2.51
LINC01239-201ENST00000433645 TRBV10-1A0A0K0K1A3 114 aa-0.61□□□□□ -2.51
LINC01239-201ENST00000433645 PPP5D1E7EU14 171 aa-0.61□□□□□ -2.51
LINC01239-201ENST00000433645 CCKP06307 115 aa-0.61□□□□□ -2.51
LINC01239-201ENST00000433645 SERPINB1P30740 379 aa-0.61□□□□□ -2.51
LINC01239-201ENST00000433645 MRPS15P82914 257 aaKnown RBP-0.61□□□□□ -2.51
LINC01239-201ENST00000433645 DCUN1D2Q6PH85 259 aa-0.61□□□□□ -2.51
LINC01239-201ENST00000433645 OR51A4Q8NGJ6 313 aa-0.61□□□□□ -2.51
LINC01239-201ENST00000433645 COA4Q9NYJ1 87 aa-0.61□□□□□ -2.51
LINC01239-201ENST00000433645 KIDINS220Q9ULH0 1771 aa-0.61□□□□□ -2.51
LINC01239-201ENST00000433645 FLNAP21333 2647 aaKnown RBP-0.61□□□□□ -2.51
LINC01239-201ENST00000433645 ROCK1Q13464 1354 aa-0.61□□□□□ -2.51
LINC01239-201ENST00000433645 MAP1LC3B2A6NCE7 125 aa-0.62□□□□□ -2.51
LINC01239-201ENST00000433645 H3BMG7 143 aa-0.62□□□□□ -2.51
LINC01239-201ENST00000433645 CDC42EP2O14613 210 aa-0.62□□□□□ -2.51
LINC01239-201ENST00000433645 PFDN1O60925 122 aa-0.62□□□□□ -2.51
LINC01239-201ENST00000433645 FAM107AO95990 144 aa-0.62□□□□□ -2.51
LINC01239-201ENST00000433645 IL7P13232 177 aa-0.62□□□□□ -2.51
LINC01239-201ENST00000433645 BLCAPP62952 87 aa-0.62□□□□□ -2.51
LINC01239-201ENST00000433645 TMEM78Q5T7P6 136 aa-0.62□□□□□ -2.51
LINC01239-201ENST00000433645 OR5A2Q8NGI9 324 aa-0.62□□□□□ -2.51
LINC01239-201ENST00000433645 NAT14Q8WUY8 206 aa-0.62□□□□□ -2.51
LINC01239-201ENST00000433645 BPESC1Q9GZL8 116 aa-0.62□□□□□ -2.51
LINC01239-201ENST00000433645 F2Z2F3 143 aa-0.63□□□□□ -2.51
LINC01239-201ENST00000433645 PYYP10082 97 aa-0.63□□□□□ -2.51
LINC01239-201ENST00000433645 EMX2Q04743 252 aa-0.63□□□□□ -2.51
LINC01239-201ENST00000433645 C3orf33Q6P1S2 294 aa-0.63□□□□□ -2.51
LINC01239-201ENST00000433645 OR4S1Q8NGB4 309 aa-0.63□□□□□ -2.51
LINC01239-201ENST00000433645 CCDC32Q9BV29 185 aa-0.63□□□□□ -2.51
LINC01239-201ENST00000433645 STAB1Q9NY15 2570 aa-0.64□□□□□ -2.51
LINC01239-201ENST00000433645 C9JAW5 83 aa-0.64□□□□□ -2.51
LINC01239-201ENST00000433645 IFNA21P01568 189 aa-0.64□□□□□ -2.51
LINC01239-201ENST00000433645 CRYGSP22914 178 aa-0.64□□□□□ -2.51
LINC01239-201ENST00000433645 UNQ5815/PRO19632Q6UWF5 114 aa-0.64□□□□□ -2.51
LINC01239-201ENST00000433645 BET1LQ9NYM9 111 aa-0.64□□□□□ -2.51
LINC01239-201ENST00000433645 ANKRD17O75179 2603 aaKnown RBP-0.64□□□□□ -2.51
LINC01239-201ENST00000433645 VIRMAQ69YN4 1812 aaKnown RBP-0.64□□□□□ -2.51
LINC01239-201ENST00000433645 LRP5O75197 1615 aa-0.64□□□□□ -2.51
LINC01239-201ENST00000433645 A2MP01023 1474 aa-0.65□□□□□ -2.51
LINC01239-201ENST00000433645 HELZP42694 1942 aaKnown RBP-0.65□□□□□ -2.51
LINC01239-201ENST00000433645 OR2H2O95918 312 aa-0.65□□□□□ -2.51
LINC01239-201ENST00000433645 ADCYAP1P18509 176 aa-0.65□□□□□ -2.51
LINC01239-201ENST00000433645 TEX29Q8N6K0 151 aa-0.65□□□□□ -2.51
LINC01239-201ENST00000433645 TMEM141Q96I45 108 aa-0.65□□□□□ -2.51
LINC01239-201ENST00000433645 MED31Q9Y3C7 131 aa-0.65□□□□□ -2.51
LINC01239-201ENST00000433645 PLXNA2O75051 1894 aa-0.65□□□□□ -2.51
LINC01239-201ENST00000433645 IGHV1-24A0A0C4DH33 117 aa-0.66□□□□□ -2.52
LINC01239-201ENST00000433645 PNMA8CA0A1B0GUJ8 204 aa-0.66□□□□□ -2.52
LINC01239-201ENST00000433645 HBDP02042 147 aa-0.66□□□□□ -2.52
LINC01239-201ENST00000433645 APOC1P02654 83 aa-0.66□□□□□ -2.52
LINC01239-201ENST00000433645 CKS2P33552 79 aa-0.66□□□□□ -2.52
LINC01239-201ENST00000433645 POLR2JP52435 117 aaKnown RBP-0.66□□□□□ -2.52
LINC01239-201ENST00000433645 IQCJQ1A5X6 159 aa-0.66□□□□□ -2.52
LINC01239-201ENST00000433645 OTOSQ8NHW6 89 aa-0.66□□□□□ -2.52
LINC01239-201ENST00000433645 PPDPFLQ8WWR9 84 aa-0.66□□□□□ -2.52
LINC01239-201ENST00000433645 HOPXQ9BPY8 73 aaPredicted RBP-0.66□□□□□ -2.52
LINC01239-201ENST00000433645 VPS25Q9BRG1 176 aa-0.66□□□□□ -2.52
LINC01239-201ENST00000433645 CBLN4Q9NTU7 201 aa-0.66□□□□□ -2.52
LINC01239-201ENST00000433645 DOPEY2Q9Y3R5 2298 aa-0.66□□□□□ -2.52
LINC01239-201ENST00000433645 ZNF142P52746 1687 aaPredicted RBP-0.67□□□□□ -2.52
LINC01239-201ENST00000433645 LOC107984640A0A0U1RRK4 108 aa-0.67□□□□□ -2.52
LINC01239-201ENST00000433645 E7EQ34 232 aa-0.67□□□□□ -2.52
LINC01239-201ENST00000433645 CRYBA4P53673 196 aa-0.67□□□□□ -2.52
LINC01239-201ENST00000433645 BASP1P80723 227 aaKnown RBP-0.67□□□□□ -2.52
LINC01239-201ENST00000433645 STX12Q86Y82 276 aa-0.67□□□□□ -2.52
LINC01239-201ENST00000433645 THEM6Q8WUY1 208 aa-0.67□□□□□ -2.52
LINC01239-201ENST00000433645 LRP2P98164 4655 aa-0.67□□□□□ -2.52
LINC01239-201ENST00000433645 HSPG2P98160 4391 aa-0.68□□□□□ -2.52
LINC01239-201ENST00000433645 A0A1W2PRE2 83 aa-0.68□□□□□ -2.52
LINC01239-201ENST00000433645 TMEM238C9JI98 176 aa-0.68□□□□□ -2.52
LINC01239-201ENST00000433645 UQCRQO14949 82 aa-0.68□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms