RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 IGHV3-15A0A0B4J1V0 119 aa2.8□□□□□ -1.96
USP54-206ENST00000433394 A0A1W2PQD3 144 aa2.8□□□□□ -1.96
USP54-206ENST00000433394 TCRBV3S1A0A5B6 114 aa2.8□□□□□ -1.96
USP54-206ENST00000433394 LY6LH3BQJ8 138 aa2.8□□□□□ -1.96
USP54-206ENST00000433394 J3QRK9 145 aa2.8□□□□□ -1.96
USP54-206ENST00000433394 COX7A2LO14548 114 aa2.8□□□□□ -1.96
USP54-206ENST00000433394 OVOL1O14753 267 aa2.8□□□□□ -1.96
USP54-206ENST00000433394 GNRH2O43555 120 aa2.8□□□□□ -1.96
USP54-206ENST00000433394 TRAPPC2P0DI81 140 aa2.8□□□□□ -1.96
USP54-206ENST00000433394 TRAPPC2BP0DI82 140 aa2.8□□□□□ -1.96
USP54-206ENST00000433394 HIST1H1DP16402 221 aaKnown RBP2.8□□□□□ -1.96
USP54-206ENST00000433394 ATP5G3P48201 142 aa2.8□□□□□ -1.96
USP54-206ENST00000433394 RBM11P57052 281 aaKnown RBP2.8□□□□□ -1.96
USP54-206ENST00000433394 SMIM11AP58511 58 aa2.8□□□□□ -1.96
USP54-206ENST00000433394 DCDP81605 110 aaKnown RBP2.8□□□□□ -1.96
USP54-206ENST00000433394 GLYATL3Q5SZD4 288 aa2.8□□□□□ -1.96
USP54-206ENST00000433394 RPL22L1Q6P5R6 122 aaKnown RBP2.8□□□□□ -1.96
USP54-206ENST00000433394 GLIPR1L1Q6UWM5 242 aa2.8□□□□□ -1.96
USP54-206ENST00000433394 HRCT1Q6UXD1 115 aa2.8□□□□□ -1.96
USP54-206ENST00000433394 C2orf91Q6ZV80 131 aa2.8□□□□□ -1.96
USP54-206ENST00000433394 LHFPL1Q86WI0 220 aa2.8□□□□□ -1.96
USP54-206ENST00000433394 SLC22A24Q8N4F4 322 aa2.8□□□□□ -1.96
USP54-206ENST00000433394 LINC00471Q8N535 108 aa2.8□□□□□ -1.96
USP54-206ENST00000433394 DEFB119Q8N690 84 aa2.8□□□□□ -1.96
USP54-206ENST00000433394 PACRGLQ8N7B6 248 aa2.8□□□□□ -1.96
USP54-206ENST00000433394 PLPP5Q8NEB5 264 aa2.8□□□□□ -1.96
USP54-206ENST00000433394 SLC25A40Q8TBP6 338 aa2.8□□□□□ -1.96
USP54-206ENST00000433394 PATE1Q8WXA2 126 aa2.8□□□□□ -1.96
USP54-206ENST00000433394 PP6455Q8WZ26 134 aa2.8□□□□□ -1.96
USP54-206ENST00000433394 TEX37Q96LM6 180 aa2.8□□□□□ -1.96
USP54-206ENST00000433394 ANAPC10Q9UM13 185 aa2.8□□□□□ -1.96
USP54-206ENST00000433394 TMEM269A0A1B0GVZ9 245 aa2.79□□□□□ -1.96
USP54-206ENST00000433394 A0A1B0GW64 132 aa2.79□□□□□ -1.96
USP54-206ENST00000433394 ARRDC5A6NEK1 342 aa2.79□□□□□ -1.96
USP54-206ENST00000433394 C11orf86A6NJI1 115 aa2.79□□□□□ -1.96
USP54-206ENST00000433394 TMEM212A6NML5 194 aa2.79□□□□□ -1.96
USP54-206ENST00000433394 CLDN25C9JDP6 229 aa2.79□□□□□ -1.96
USP54-206ENST00000433394 CD2P06729 351 aa2.79□□□□□ -1.96
USP54-206ENST00000433394 BRS3P32247 399 aa2.79□□□□□ -1.96
USP54-206ENST00000433394 NDUFA6P56556 154 aa2.79□□□□□ -1.96
USP54-206ENST00000433394 TPPP2P59282 170 aa2.79□□□□□ -1.96
USP54-206ENST00000433394 EIF5AP63241 154 aaKnown RBP2.79□□□□□ -1.96
USP54-206ENST00000433394 RHOGP84095 191 aa2.79□□□□□ -1.96
USP54-206ENST00000433394 HSD52Q0P140 79 aa2.79□□□□□ -1.96
USP54-206ENST00000433394 EIF5AL1Q6IS14 154 aaKnown RBP2.79□□□□□ -1.96
USP54-206ENST00000433394 MORN4Q8NDC4 146 aa2.79□□□□□ -1.96
USP54-206ENST00000433394 CLDND2Q8NHS1 167 aa2.79□□□□□ -1.96
USP54-206ENST00000433394 BORCS8Q96FH0 119 aa2.79□□□□□ -1.96
USP54-206ENST00000433394 TSPAN32Q96QS1 320 aa2.79□□□□□ -1.96
USP54-206ENST00000433394 IMUPQ9GZP8 106 aa2.79□□□□□ -1.96
USP54-206ENST00000433394 C16orf95Q9H693 158 aa2.79□□□□□ -1.96
USP54-206ENST00000433394 MED9Q9NWA0 146 aa2.79□□□□□ -1.96
USP54-206ENST00000433394 TVP23BQ9NYZ1 205 aa2.79□□□□□ -1.96
USP54-206ENST00000433394 AP4S1Q9Y587 144 aa2.79□□□□□ -1.96
USP54-206ENST00000433394 U3KQA8 63 aa2.79□□□□□ -1.96
USP54-206ENST00000433394 ANKRD11Q6UB99 2663 aaPredicted RBP2.79□□□□□ -1.96
USP54-206ENST00000433394 DNAH14Q0VDD8 3507 aa2.78□□□□□ -1.96
USP54-206ENST00000433394 SPTA1P02549 2419 aa2.78□□□□□ -1.96
USP54-206ENST00000433394 DSPPQ9NZW4 1301 aa2.78□□□□□ -1.96
USP54-206ENST00000433394 GGT3PA6NGU5 568 aa2.78□□□□□ -1.96
USP54-206ENST00000433394 LYZL6O75951 148 aa2.78□□□□□ -1.96
USP54-206ENST00000433394 ZNF682O95780 498 aa2.78□□□□□ -1.96
USP54-206ENST00000433394 HMGN2P05204 90 aaKnown RBP2.78□□□□□ -1.96
USP54-206ENST00000433394 IL7P13232 177 aa2.78□□□□□ -1.96
USP54-206ENST00000433394 FKBP2P26885 142 aaKnown RBP2.78□□□□□ -1.96
USP54-206ENST00000433394 HES1Q14469 280 aa2.78□□□□□ -1.96
USP54-206ENST00000433394 CLLU1Q5K131 121 aa2.78□□□□□ -1.96
USP54-206ENST00000433394 KRTAP5-5Q701N2 237 aaPredicted RBP2.78□□□□□ -1.96
USP54-206ENST00000433394 SPATA12Q7Z6I5 190 aa2.78□□□□□ -1.96
USP54-206ENST00000433394 SLC35E3Q7Z769 313 aa2.78□□□□□ -1.96
USP54-206ENST00000433394 EXOC3-AS1Q8N2X6 119 aa2.78□□□□□ -1.96
USP54-206ENST00000433394 SMCR5Q8TEV8 140 aa2.78□□□□□ -1.96
USP54-206ENST00000433394 S100ZQ8WXG8 99 aa2.78□□□□□ -1.96
USP54-206ENST00000433394 SLC25A21Q9BQT8 299 aaPredicted RBP2.78□□□□□ -1.96
USP54-206ENST00000433394 DERL1Q9BUN8 251 aa2.78□□□□□ -1.96
USP54-206ENST00000433394 TAS2R8Q9NYW2 309 aa2.78□□□□□ -1.96
USP54-206ENST00000433394 CACNA1AO00555 2505 aa2.78□□□□□ -1.96
USP54-206ENST00000433394 RP1L1Q8IWN7 2480 aaPredicted RBP2.78□□□□□ -1.96
USP54-206ENST00000433394 SPTBN2O15020 2390 aa2.78□□□□□ -1.97
USP54-206ENST00000433394 MYO15AQ9UKN7 3530 aa2.77□□□□□ -1.97
USP54-206ENST00000433394 PRRC2CQ9Y520 2896 aaKnown RBP2.77□□□□□ -1.97
USP54-206ENST00000433394 TRAV4A0A0B4J268 109 aa2.77□□□□□ -1.97
USP54-206ENST00000433394 A0A0G2JMM0 328 aa2.77□□□□□ -1.97
USP54-206ENST00000433394 TRDV1A0A1B0GX56 115 aa2.77□□□□□ -1.97
USP54-206ENST00000433394 A0A1W2PPB8 328 aa2.77□□□□□ -1.97
USP54-206ENST00000433394 KIR3DP1A8MWS1 328 aa2.77□□□□□ -1.97
USP54-206ENST00000433394 HMGN4O00479 90 aa2.77□□□□□ -1.97
USP54-206ENST00000433394 NPFFO15130 113 aa2.77□□□□□ -1.97
USP54-206ENST00000433394 CREBL2O60519 120 aaPredicted RBP2.77□□□□□ -1.97
USP54-206ENST00000433394 NCR2O95944 276 aa2.77□□□□□ -1.97
USP54-206ENST00000433394 LINC00694P0DN24 101 aa2.77□□□□□ -1.97
USP54-206ENST00000433394 CCL1P22362 96 aa2.77□□□□□ -1.97
USP54-206ENST00000433394 ETV6P41212 452 aa2.77□□□□□ -1.97
USP54-206ENST00000433394 SLC38A11Q08AI6 406 aa2.77□□□□□ -1.97
USP54-206ENST00000433394 ZNF846Q147U1 533 aa2.77□□□□□ -1.97
USP54-206ENST00000433394 RTL8BQ17RB0 113 aa2.77□□□□□ -1.97
USP54-206ENST00000433394 VMA21Q3ZAQ7 101 aa2.77□□□□□ -1.97
USP54-206ENST00000433394 MEIG1Q5JSS6 88 aa2.77□□□□□ -1.97
USP54-206ENST00000433394 LGALS9CQ6DKI2 356 aa2.77□□□□□ -1.97
USP54-206ENST00000433394 Q6Q795 121 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms