RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 BLMP54132 1417 aaPredicted RBP0.18□□□□□ -2.38
CDC40-204ENST00000431461 FAM135BQ49AJ0 1406 aa0.18□□□□□ -2.38
CDC40-204ENST00000431461 NINQ8N4C6 2090 aa0.18□□□□□ -2.38
CDC40-204ENST00000431461 ANK1P16157 1881 aa0.18□□□□□ -2.38
CDC40-204ENST00000431461 ASH1LQ9NR48 2969 aaKnown RBP0.18□□□□□ -2.38
CDC40-204ENST00000431461 CACNA1EQ15878 2313 aa0.18□□□□□ -2.38
CDC40-204ENST00000431461 UHRF1BP1LA0JNW5 1464 aa0.17□□□□□ -2.38
CDC40-204ENST00000431461 LOC285556D6RIA3 1793 aa0.17□□□□□ -2.38
CDC40-204ENST00000431461 NAV3Q8IVL0 2385 aa0.17□□□□□ -2.38
CDC40-204ENST00000431461 ZNF462Q96JM2 2506 aa0.17□□□□□ -2.38
CDC40-204ENST00000431461 BORCS7-ASMTA0A0B4J1R7 106 aa0.17□□□□□ -2.38
CDC40-204ENST00000431461 NBDYA0A0U1RRE5 68 aa0.17□□□□□ -2.38
CDC40-204ENST00000431461 FXYD1O00168 92 aa0.17□□□□□ -2.38
CDC40-204ENST00000431461 SMIM24O75264 130 aa0.17□□□□□ -2.38
CDC40-204ENST00000431461 FABP1P07148 127 aa0.17□□□□□ -2.38
CDC40-204ENST00000431461 ADCYAP1P18509 176 aa0.17□□□□□ -2.38
CDC40-204ENST00000431461 G0S2P27469 103 aa0.17□□□□□ -2.38
CDC40-204ENST00000431461 PCBD1P61457 104 aa0.17□□□□□ -2.38
CDC40-204ENST00000431461 HSD17B12Q53GQ0 312 aa0.17□□□□□ -2.38
CDC40-204ENST00000431461 PPP1R2P3Q6NXS1 205 aa0.17□□□□□ -2.38
CDC40-204ENST00000431461 TEX29Q8N6K0 151 aa0.17□□□□□ -2.38
CDC40-204ENST00000431461 LINC00208Q96KT6 92 aa0.17□□□□□ -2.38
CDC40-204ENST00000431461 SELENOSQ9BQE4 189 aa0.17□□□□□ -2.38
CDC40-204ENST00000431461 FKBP11Q9NYL4 201 aa0.17□□□□□ -2.38
CDC40-204ENST00000431461 TANC2Q9HCD6 1990 aa0.17□□□□□ -2.38
CDC40-204ENST00000431461 APCP25054 2843 aa0.17□□□□□ -2.38
CDC40-204ENST00000431461 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.16□□□□□ -2.38
CDC40-204ENST00000431461 PTPRGP23470 1445 aa0.16□□□□□ -2.38
CDC40-204ENST00000431461 ZDBF2Q9HCK1 2354 aa0.16□□□□□ -2.38
CDC40-204ENST00000431461 J3KT08 172 aa0.16□□□□□ -2.38
CDC40-204ENST00000431461 OR2H2O95918 312 aa0.16□□□□□ -2.38
CDC40-204ENST00000431461 RBP4P02753 201 aa0.16□□□□□ -2.38
CDC40-204ENST00000431461 CCKP06307 115 aa0.16□□□□□ -2.38
CDC40-204ENST00000431461 SCTP09683 121 aa0.16□□□□□ -2.38
CDC40-204ENST00000431461 VMO1Q7Z5L0 202 aa0.16□□□□□ -2.38
CDC40-204ENST00000431461 OR8I2Q8N0Y5 310 aa0.16□□□□□ -2.38
CDC40-204ENST00000431461 OTOSQ8NHW6 89 aa0.16□□□□□ -2.38
CDC40-204ENST00000431461 BRK1Q8WUW1 75 aa0.16□□□□□ -2.38
CDC40-204ENST00000431461 PRR15LQ9BU68 103 aa0.16□□□□□ -2.38
CDC40-204ENST00000431461 CALML5Q9NZT1 146 aa0.16□□□□□ -2.38
CDC40-204ENST00000431461 TRAPPC2LQ9UL33 140 aa0.16□□□□□ -2.38
CDC40-204ENST00000431461 CTTNBP2Q8WZ74 1663 aa0.16□□□□□ -2.38
CDC40-204ENST00000431461 CDK12Q9NYV4 1490 aaPredicted RBP0.16□□□□□ -2.38
CDC40-204ENST00000431461 KNTC1P50748 2209 aa0.15□□□□□ -2.38
CDC40-204ENST00000431461 LOC101927531A0A1B0GV80 90 aa0.15□□□□□ -2.39
CDC40-204ENST00000431461 A0A1B0GX51 115 aa0.15□□□□□ -2.39
CDC40-204ENST00000431461 CCDC179H3BU77 68 aa0.15□□□□□ -2.39
CDC40-204ENST00000431461 LY6G6CO95867 125 aa0.15□□□□□ -2.39
CDC40-204ENST00000431461 DBIP07108 87 aaKnown RBP0.15□□□□□ -2.39
CDC40-204ENST00000431461 KRTAP2-3P0C7H8 128 aa0.15□□□□□ -2.39
CDC40-204ENST00000431461 HRCT1Q6UXD1 115 aa0.15□□□□□ -2.39
CDC40-204ENST00000431461 KRTAP2-4Q9BYR9 128 aa0.15□□□□□ -2.39
CDC40-204ENST00000431461 KRTAP2-1Q9BYU5 128 aa0.15□□□□□ -2.39
CDC40-204ENST00000431461 COMMD3Q9UBI1 195 aa0.15□□□□□ -2.39
CDC40-204ENST00000431461 ERG28Q9UKR5 140 aa0.15□□□□□ -2.39
CDC40-204ENST00000431461 TRPM7Q96QT4 1865 aa0.15□□□□□ -2.39
CDC40-204ENST00000431461 CCDC171Q6TFL3 1326 aa0.14□□□□□ -2.39
CDC40-204ENST00000431461 SPAG17Q6Q759 2223 aa0.14□□□□□ -2.39
CDC40-204ENST00000431461 OVOS2A0A0G2JMS6 1433 aa0.14□□□□□ -2.39
CDC40-204ENST00000431461 FER1L6Q2WGJ9 1857 aa0.14□□□□□ -2.39
CDC40-204ENST00000431461 RBAKDNA6NC62 111 aa0.14□□□□□ -2.39
CDC40-204ENST00000431461 F2Z2F3 143 aa0.14□□□□□ -2.39
CDC40-204ENST00000431461 M0QZK8 103 aa0.14□□□□□ -2.39
CDC40-204ENST00000431461 CDC42EP2O14613 210 aa0.14□□□□□ -2.39
CDC40-204ENST00000431461 SPINK1P00995 79 aa0.14□□□□□ -2.39
CDC40-204ENST00000431461 CD3DP04234 171 aa0.14□□□□□ -2.39
CDC40-204ENST00000431461 PAEPP09466 180 aa0.14□□□□□ -2.39
CDC40-204ENST00000431461 IL7P13232 177 aa0.14□□□□□ -2.39
CDC40-204ENST00000431461 RPL7P18124 248 aaKnown RBP0.14□□□□□ -2.39
CDC40-204ENST00000431461 AKR1D1P51857 326 aa0.14□□□□□ -2.39
CDC40-204ENST00000431461 TMEM141Q96I45 108 aa0.14□□□□□ -2.39
CDC40-204ENST00000431461 SLC35B3Q9H1N7 401 aa0.14□□□□□ -2.39
CDC40-204ENST00000431461 GINS2Q9Y248 185 aa0.14□□□□□ -2.39
CDC40-204ENST00000431461 AFDNP55196 1824 aaKnown RBP0.14□□□□□ -2.39
CDC40-204ENST00000431461 NAV2Q8IVL1 2488 aa0.13□□□□□ -2.39
CDC40-204ENST00000431461 WDR97A6NE52 1622 aa0.13□□□□□ -2.39
CDC40-204ENST00000431461 TRAV36DV7A0A075B6V5 113 aa0.13□□□□□ -2.39
CDC40-204ENST00000431461 IGKCP01834 107 aa0.13□□□□□ -2.39
CDC40-204ENST00000431461 SLC25A5P05141 298 aaKnown RBP0.13□□□□□ -2.39
CDC40-204ENST00000431461 MPC1LP0DKB6 136 aa0.13□□□□□ -2.39
CDC40-204ENST00000431461 PYYP10082 97 aa0.13□□□□□ -2.39
CDC40-204ENST00000431461 OR8B8Q15620 311 aa0.13□□□□□ -2.39
CDC40-204ENST00000431461 CCDC153Q494R4 210 aa0.13□□□□□ -2.39
CDC40-204ENST00000431461 Q5BKY6 102 aa0.13□□□□□ -2.39
CDC40-204ENST00000431461 TMEM91Q6ZNR0 172 aa0.13□□□□□ -2.39
CDC40-204ENST00000431461 SLC25A26Q70HW3 274 aa0.13□□□□□ -2.39
CDC40-204ENST00000431461 ATP6V0E2Q8NHE4 81 aa0.13□□□□□ -2.39
CDC40-204ENST00000431461 BPESC1Q9GZL8 116 aa0.13□□□□□ -2.39
CDC40-204ENST00000431461 PBRM1Q86U86 1689 aa0.13□□□□□ -2.39
CDC40-204ENST00000431461 RBBP6Q7Z6E9 1792 aaKnown RBP0.13□□□□□ -2.39
CDC40-204ENST00000431461 DLEC1Q9Y238 1755 aa0.13□□□□□ -2.39
CDC40-204ENST00000431461 MYH1P12882 1939 aa0.13□□□□□ -2.39
CDC40-204ENST00000431461 KDM6BO15054 1643 aa0.13□□□□□ -2.39
CDC40-204ENST00000431461 CDK13Q14004 1512 aaKnown RBP0.13□□□□□ -2.39
CDC40-204ENST00000431461 KIDINS220Q9ULH0 1771 aa0.12□□□□□ -2.39
CDC40-204ENST00000431461 LAMC3Q9Y6N6 1575 aa0.12□□□□□ -2.39
CDC40-204ENST00000431461 ZCCHC6Q5VYS8 1495 aaKnown RBP0.12□□□□□ -2.39
CDC40-204ENST00000431461 GNG14A0A1W2PPG7 69 aa0.12□□□□□ -2.39
CDC40-204ENST00000431461 C9JAW5 83 aa0.12□□□□□ -2.39
CDC40-204ENST00000431461 ZNF670-ZNF695F2Z2N8 137 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms