RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 OR11H1Q8NG94 326 aa12.56□□□□□ -0.4
USHBP1-203ENST00000431146 MS4A6AQ9H2W1 248 aa12.56□□□□□ -0.4
USHBP1-203ENST00000431146 WNK1Q9H4A3 2382 aa12.56□□□□□ -0.4
USHBP1-203ENST00000431146 UBE2V1Q13404 147 aa12.56□□□□□ -0.4
USHBP1-203ENST00000431146 OR10J3Q5JRS4 329 aa12.56□□□□□ -0.4
USHBP1-203ENST00000431146 C18orf32Q8TCD1 76 aa12.56□□□□□ -0.4
USHBP1-203ENST00000431146 C2orf70A6NJV1 201 aa12.55□□□□□ -0.4
USHBP1-203ENST00000431146 LGALS9O00182 355 aa12.55□□□□□ -0.4
USHBP1-203ENST00000431146 OVOL1O14753 267 aa12.55□□□□□ -0.4
USHBP1-203ENST00000431146 RIGQ13278 110 aa12.55□□□□□ -0.4
USHBP1-203ENST00000431146 KLF5Q13887 457 aaPredicted RBP12.55□□□□□ -0.4
USHBP1-203ENST00000431146 KLHL30-AS1Q8NEE0 82 aa12.55□□□□□ -0.4
USHBP1-203ENST00000431146 C20orf144Q9BQM9 153 aa12.55□□□□□ -0.4
USHBP1-203ENST00000431146 IGKV3D-20A0A0C4DH25 116 aa12.55□□□□□ -0.4
USHBP1-203ENST00000431146 Q6AWC8 147 aa12.55□□□□□ -0.4
USHBP1-203ENST00000431146 ADAMTSL5Q6ZMM2 481 aa12.55□□□□□ -0.4
USHBP1-203ENST00000431146 FER1L6-AS1Q8NA97 138 aa12.55□□□□□ -0.4
USHBP1-203ENST00000431146 OR8A1Q8NGG7 326 aa12.55□□□□□ -0.4
USHBP1-203ENST00000431146 ZNF688P0C7X2 276 aa12.54□□□□□ -0.4
USHBP1-203ENST00000431146 KIR3DS1Q14943 382 aa12.54□□□□□ -0.4
USHBP1-203ENST00000431146 C4orf3Q8WVX3 66 aa12.54□□□□□ -0.4
USHBP1-203ENST00000431146 WFDC12Q8WWY7 111 aa12.54□□□□□ -0.4
USHBP1-203ENST00000431146 BORCS7Q96B45 105 aa12.54□□□□□ -0.4
USHBP1-203ENST00000431146 MIEN1Q9BRT3 115 aa12.54□□□□□ -0.4
USHBP1-203ENST00000431146 AGRNO00468 2067 aa12.53□□□□□ -0.4
USHBP1-203ENST00000431146 A0A1W2PRX2 142 aa12.53□□□□□ -0.4
USHBP1-203ENST00000431146 LINC01619G3V211 115 aa12.53□□□□□ -0.4
USHBP1-203ENST00000431146 CD33P20138 364 aa12.53□□□□□ -0.4
USHBP1-203ENST00000431146 LINC01559Q495D7 138 aa12.53□□□□□ -0.4
USHBP1-203ENST00000431146 LINC00477Q96M19 166 aa12.53□□□□□ -0.4
USHBP1-203ENST00000431146 IGLC6P0CF74 106 aa12.53□□□□□ -0.4
USHBP1-203ENST00000431146 ID1P41134 155 aa12.53□□□□□ -0.4
USHBP1-203ENST00000431146 ZNF705AQ6ZN79 300 aaPredicted RBP12.53□□□□□ -0.4
USHBP1-203ENST00000431146 DPF1Q92782 380 aa12.53□□□□□ -0.4
USHBP1-203ENST00000431146 LOC102724200A0A096LPH7 203 aaPredicted RBP12.52□□□□□ -0.4
USHBP1-203ENST00000431146 LY6G6DO95868 133 aa12.52□□□□□ -0.4
USHBP1-203ENST00000431146 PSMG4Q5JS54 123 aa12.52□□□□□ -0.4
USHBP1-203ENST00000431146 ZFAND2AQ8N6M9 145 aa12.52□□□□□ -0.4
USHBP1-203ENST00000431146 OR1N2Q8NGR9 330 aa12.52□□□□□ -0.4
USHBP1-203ENST00000431146 SETXQ7Z333 2677 aaKnown RBP12.52□□□□□ -0.41
USHBP1-203ENST00000431146 M0QZ24 198 aa12.52□□□□□ -0.41
USHBP1-203ENST00000431146 ESDP10768 282 aa12.52□□□□□ -0.41
USHBP1-203ENST00000431146 SAMD10Q9BYL1 202 aa12.52□□□□□ -0.41
USHBP1-203ENST00000431146 MSRB1Q9NZV6 116 aa12.52□□□□□ -0.41
USHBP1-203ENST00000431146 RNASE1P07998 156 aaKnown RBP12.51□□□□□ -0.41
USHBP1-203ENST00000431146 CD28P10747 220 aa12.51□□□□□ -0.41
USHBP1-203ENST00000431146 NTF3P20783 257 aa12.51□□□□□ -0.41
USHBP1-203ENST00000431146 CTRLP40313 264 aa12.51□□□□□ -0.41
USHBP1-203ENST00000431146 SRSF2Q01130 221 aaKnown RBP12.51□□□□□ -0.41
USHBP1-203ENST00000431146 DLX4Q92988 240 aaPredicted RBP12.51□□□□□ -0.41
USHBP1-203ENST00000431146 NAGKQ9UJ70 344 aa12.51□□□□□ -0.41
USHBP1-203ENST00000431146 PMCHP20382 165 aa12.5□□□□□ -0.41
USHBP1-203ENST00000431146 TWIST1Q15672 202 aa12.5□□□□□ -0.41
USHBP1-203ENST00000431146 FAM19A2Q8N3H0 131 aa12.5□□□□□ -0.41
USHBP1-203ENST00000431146 KCNS1Q96KK3 526 aa12.5□□□□□ -0.41
USHBP1-203ENST00000431146 GPX1P07203 203 aa12.5□□□□□ -0.41
USHBP1-203ENST00000431146 RNASE4P34096 147 aaKnown RBP12.5□□□□□ -0.41
USHBP1-203ENST00000431146 LINC01006Q8NI28 216 aa12.5□□□□□ -0.41
USHBP1-203ENST00000431146 LENEPQ9Y5L5 61 aa12.5□□□□□ -0.41
USHBP1-203ENST00000431146 K7EQG2 157 aa12.49□□□□□ -0.41
USHBP1-203ENST00000431146 ZNF418Q8TF45 676 aaPredicted RBP12.49□□□□□ -0.41
USHBP1-203ENST00000431146 NIPBLQ6KC79 2804 aaeCLIP12.49□□□□□ -0.41
USHBP1-203ENST00000431146 A0A1B0GW15 77 aa12.49□□□□□ -0.41
USHBP1-203ENST00000431146 IGKV3-20P01619 116 aa12.49□□□□□ -0.41
USHBP1-203ENST00000431146 Q6ZWC4 215 aa12.49□□□□□ -0.41
USHBP1-203ENST00000431146 AMN1Q8IY45 258 aa12.49□□□□□ -0.41
USHBP1-203ENST00000431146 OR9G4Q8NGQ1 327 aa12.49□□□□□ -0.41
USHBP1-203ENST00000431146 FAM19A4Q96LR4 140 aa12.49□□□□□ -0.41
USHBP1-203ENST00000431146 AMTP48728 403 aa12.48□□□□□ -0.41
USHBP1-203ENST00000431146 SNRPD3P62318 126 aaKnown RBP12.48□□□□□ -0.41
USHBP1-203ENST00000431146 PAFAH1B2P68402 229 aa12.48□□□□□ -0.41
USHBP1-203ENST00000431146 RNASEKQ6P5S7 137 aaKnown RBP12.48□□□□□ -0.41
USHBP1-203ENST00000431146 GATD1Q8NB37 220 aa12.48□□□□□ -0.41
USHBP1-203ENST00000431146 HILS1P60008 231 aa12.47□□□□□ -0.41
USHBP1-203ENST00000431146 ZNF493Q6ZR52 646 aa12.47□□□□□ -0.41
USHBP1-203ENST00000431146 URB1-AS1Q96HZ7 61 aa12.47□□□□□ -0.41
USHBP1-203ENST00000431146 RAX2Q96IS3 184 aa12.47□□□□□ -0.41
USHBP1-203ENST00000431146 RNF114Q9Y508 228 aa12.47□□□□□ -0.41
USHBP1-203ENST00000431146 ZNF324O75467 553 aaPredicted RBP12.47□□□□□ -0.41
USHBP1-203ENST00000431146 SCGB2A2Q13296 93 aa12.47□□□□□ -0.41
USHBP1-203ENST00000431146 OCIAD2Q56VL3 154 aa12.47□□□□□ -0.41
USHBP1-203ENST00000431146 SAMD13Q5VXD3 122 aa12.47□□□□□ -0.41
USHBP1-203ENST00000431146 CITED2Q99967 270 aaPredicted RBP12.47□□□□□ -0.41
USHBP1-203ENST00000431146 TIMM8BQ9Y5J9 83 aaPredicted RBP12.47□□□□□ -0.41
USHBP1-203ENST00000431146 HIVEP1P15822 2718 aa12.46□□□□□ -0.41
USHBP1-203ENST00000431146 SPRY2O43597 315 aa12.46□□□□□ -0.41
USHBP1-203ENST00000431146 CSN3P07498 182 aa12.46□□□□□ -0.41
USHBP1-203ENST00000431146 NIT1Q86X76 327 aa12.46□□□□□ -0.41
USHBP1-203ENST00000431146 OR10AG1Q8NH19 301 aa12.46□□□□□ -0.41
USHBP1-203ENST00000431146 TMEM160Q9NX00 188 aa12.46□□□□□ -0.41
USHBP1-203ENST00000431146 H3BVH4 76 aa12.46□□□□□ -0.42
USHBP1-203ENST00000431146 PEMTQ9UBM1 199 aa12.46□□□□□ -0.42
USHBP1-203ENST00000431146 NSD1Q96L73 2696 aaPredicted RBP12.45□□□□□ -0.42
USHBP1-203ENST00000431146 TRAV21A0A0B4J279 112 aa12.45□□□□□ -0.42
USHBP1-203ENST00000431146 PMCHL1Q16048 86 aa12.45□□□□□ -0.42
USHBP1-203ENST00000431146 FAM104BQ5XKR9 115 aa12.45□□□□□ -0.42
USHBP1-203ENST00000431146 D6R8Y8 96 aa12.44□□□□□ -0.42
USHBP1-203ENST00000431146 HSBP1O75506 76 aa12.44□□□□□ -0.42
USHBP1-203ENST00000431146 SCGB1D1O95968 90 aa12.44□□□□□ -0.42
USHBP1-203ENST00000431146 ANXA2RQ3ZCQ2 193 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms