RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 IZUMO1RA6ND01 250 aa4.1□□□□□ -1.75
PTPN4-203ENST00000430976 NDUFA3O95167 84 aa4.1□□□□□ -1.75
PTPN4-203ENST00000430976 IGHV4-34P06331 123 aa4.1□□□□□ -1.75
PTPN4-203ENST00000430976 LINC00313P59037 77 aa4.1□□□□□ -1.75
PTPN4-203ENST00000430976 SERF2P84101 59 aa4.1□□□□□ -1.75
PTPN4-203ENST00000430976 ARFGEF1Q9Y6D6 1849 aa4.1□□□□□ -1.75
PTPN4-203ENST00000430976 IGKV1-8A0A0C4DH67 115 aa4.1□□□□□ -1.75
PTPN4-203ENST00000430976 CFPP27918 469 aa4.1□□□□□ -1.75
PTPN4-203ENST00000430976 LINC01554Q52M75 96 aa4.1□□□□□ -1.75
PTPN4-203ENST00000430976 RNASE13Q5GAN3 156 aaKnown RBP4.1□□□□□ -1.75
PTPN4-203ENST00000430976 DKK2Q9UBU2 259 aa4.1□□□□□ -1.75
PTPN4-203ENST00000430976 TMEM14AQ9Y6G1 99 aa4.1□□□□□ -1.75
PTPN4-203ENST00000430976 PKD1L3Q7Z443 1732 aa4.09□□□□□ -1.75
PTPN4-203ENST00000430976 ARRDC1-AS1Q9H2J1 176 aa4.09□□□□□ -1.75
PTPN4-203ENST00000430976 SCN11AQ9UI33 1791 aa4.09□□□□□ -1.75
PTPN4-203ENST00000430976 CENPFP49454 3210 aa4.09□□□□□ -1.75
PTPN4-203ENST00000430976 IGKV1D-33P01593 117 aa4.09□□□□□ -1.75
PTPN4-203ENST00000430976 IGKV1-33P01594 117 aa4.09□□□□□ -1.75
PTPN4-203ENST00000430976 TREML4Q6UXN2 200 aa4.09□□□□□ -1.75
PTPN4-203ENST00000430976 SCXQ7RTU7 201 aa4.09□□□□□ -1.75
PTPN4-203ENST00000430976 DEFB132Q7Z7B7 95 aa4.09□□□□□ -1.75
PTPN4-203ENST00000430976 DYNLRB2Q8TF09 96 aa4.09□□□□□ -1.75
PTPN4-203ENST00000430976 RNASE6Q93091 150 aaKnown RBP4.09□□□□□ -1.75
PTPN4-203ENST00000430976 MED13LQ71F56 2210 aa4.09□□□□□ -1.76
PTPN4-203ENST00000430976 FOCADQ5VW36 1801 aa4.09□□□□□ -1.76
PTPN4-203ENST00000430976 TPRP12270 2363 aaKnown RBP4.09□□□□□ -1.76
PTPN4-203ENST00000430976 ADAMTSL1Q8N6G6 1762 aa4.09□□□□□ -1.76
PTPN4-203ENST00000430976 D6R8Y8 96 aa4.09□□□□□ -1.76
PTPN4-203ENST00000430976 ARL14EPLP0DKL9 152 aa4.09□□□□□ -1.76
PTPN4-203ENST00000430976 TNP2Q05952 138 aa4.09□□□□□ -1.76
PTPN4-203ENST00000430976 C15orf32Q32M92 178 aa4.09□□□□□ -1.76
PTPN4-203ENST00000430976 C7orf65Q6ZTY9 151 aa4.09□□□□□ -1.76
PTPN4-203ENST00000430976 MUSTN1Q8IVN3 82 aa4.09□□□□□ -1.76
PTPN4-203ENST00000430976 SBSPONQ8IVN8 264 aa4.09□□□□□ -1.76
PTPN4-203ENST00000430976 RPRMLQ8N4K4 120 aa4.09□□□□□ -1.76
PTPN4-203ENST00000430976 C11orf52Q96A22 123 aa4.09□□□□□ -1.76
PTPN4-203ENST00000430976 Q9HAA7 133 aa4.09□□□□□ -1.76
PTPN4-203ENST00000430976 A0A0A6YYD4 124 aa4.08□□□□□ -1.76
PTPN4-203ENST00000430976 TRAV13-2A0A0B4J235 113 aa4.08□□□□□ -1.76
PTPN4-203ENST00000430976 POM121L12Q8N7R1 296 aa4.08□□□□□ -1.76
PTPN4-203ENST00000430976 PHLDA3Q9Y5J5 127 aa4.08□□□□□ -1.76
PTPN4-203ENST00000430976 ANKRD36A6QL64 1941 aa4.08□□□□□ -1.76
PTPN4-203ENST00000430976 FAM223BA6NKX1 122 aa4.08□□□□□ -1.76
PTPN4-203ENST00000430976 CRIP2P52943 208 aaPredicted RBP4.08□□□□□ -1.76
PTPN4-203ENST00000430976 PSMG4Q5JS54 123 aa4.08□□□□□ -1.76
PTPN4-203ENST00000430976 GFRALQ6UXV0 394 aa4.08□□□□□ -1.76
PTPN4-203ENST00000430976 LINC00528Q8N1L1 170 aa4.08□□□□□ -1.76
PTPN4-203ENST00000430976 LINC00269Q8N2A0 174 aa4.08□□□□□ -1.76
PTPN4-203ENST00000430976 PRO1854Q9UHT4 67 aa4.08□□□□□ -1.76
PTPN4-203ENST00000430976 TRIP12Q14669 1992 aaPredicted RBP4.08□□□□□ -1.76
PTPN4-203ENST00000430976 TRBV5-5A0A0J9YX44 114 aa4.08□□□□□ -1.76
PTPN4-203ENST00000430976 TRBV10-2A0A0K0K1G8 114 aa4.08□□□□□ -1.76
PTPN4-203ENST00000430976 ZNHIT1O43257 154 aa4.08□□□□□ -1.76
PTPN4-203ENST00000430976 GPHB5Q86YW7 130 aa4.08□□□□□ -1.76
PTPN4-203ENST00000430976 DYNAPQ8N1N2 210 aa4.08□□□□□ -1.76
PTPN4-203ENST00000430976 TIMM21Q9BVV7 248 aa4.08□□□□□ -1.76
PTPN4-203ENST00000430976 MAST2Q6P0Q8 1798 aa4.08□□□□□ -1.76
PTPN4-203ENST00000430976 A0A0G2JRQ6 117 aa4.07□□□□□ -1.76
PTPN4-203ENST00000430976 HIGD1CA8MV81 97 aa4.07□□□□□ -1.76
PTPN4-203ENST00000430976 H0Y9J4 135 aa4.07□□□□□ -1.76
PTPN4-203ENST00000430976 LEPROTO15243 131 aa4.07□□□□□ -1.76
PTPN4-203ENST00000430976 ESRGQ1W209 222 aa4.07□□□□□ -1.76
PTPN4-203ENST00000430976 C8orf49Q96NF6 230 aa4.07□□□□□ -1.76
PTPN4-203ENST00000430976 ZNF747Q9BV97 191 aa4.07□□□□□ -1.76
PTPN4-203ENST00000430976 RGPD2P0DJD1 1756 aa4.07□□□□□ -1.76
PTPN4-203ENST00000430976 TFF3Q07654 80 aa4.07□□□□□ -1.76
PTPN4-203ENST00000430976 NDUFA12Q9UI09 145 aa4.07□□□□□ -1.76
PTPN4-203ENST00000430976 COL1A1P02452 1464 aaPredicted RBP4.07□□□□□ -1.76
PTPN4-203ENST00000430976 C5P01031 1676 aa4.07□□□□□ -1.76
PTPN4-203ENST00000430976 CREBBPQ92793 2442 aa4.07□□□□□ -1.76
PTPN4-203ENST00000430976 UBR3Q6ZT12 1888 aa4.07□□□□□ -1.76
PTPN4-203ENST00000430976 NNATQ16517 81 aa4.07□□□□□ -1.76
PTPN4-203ENST00000430976 RMI2Q96E14 147 aa4.07□□□□□ -1.76
PTPN4-203ENST00000430976 MAP6D1Q9H9H5 199 aa4.07□□□□□ -1.76
PTPN4-203ENST00000430976 UNC79Q9P2D8 2635 aa4.07□□□□□ -1.76
PTPN4-203ENST00000430976 TRBV5-7A0A0A0MS05 114 aa4.06□□□□□ -1.76
PTPN4-203ENST00000430976 TRAV12-1A0A0B4J245 112 aa4.06□□□□□ -1.76
PTPN4-203ENST00000430976 ZNF525Q8N782 197 aa4.06□□□□□ -1.76
PTPN4-203ENST00000430976 PLA2G12BQ9BX93 195 aa4.06□□□□□ -1.76
PTPN4-203ENST00000430976 SPTBN2O15020 2390 aa4.06□□□□□ -1.76
PTPN4-203ENST00000430976 A0A0J9YXV3 536 aa4.06□□□□□ -1.76
PTPN4-203ENST00000430976 QRFPP83859 136 aa4.06□□□□□ -1.76
PTPN4-203ENST00000430976 PLGLAQ15195 96 aa4.06□□□□□ -1.76
PTPN4-203ENST00000430976 Q8N8P6 123 aa4.06□□□□□ -1.76
PTPN4-203ENST00000430976 ANKRD17O75179 2603 aaKnown RBP4.06□□□□□ -1.76
PTPN4-203ENST00000430976 ADAMTS7Q9UKP4 1686 aa4.06□□□□□ -1.76
PTPN4-203ENST00000430976 NAV3Q8IVL0 2385 aa4.06□□□□□ -1.76
PTPN4-203ENST00000430976 PLXNB3Q9ULL4 1909 aa4.06□□□□□ -1.76
PTPN4-203ENST00000430976 IGLV3-10A0A075B6K4 115 aa4.06□□□□□ -1.76
PTPN4-203ENST00000430976 COL8A2P25067 703 aa4.06□□□□□ -1.76
PTPN4-203ENST00000430976 ZNF625Q96I27 306 aaPredicted RBP4.06□□□□□ -1.76
PTPN4-203ENST00000430976 V9GYV3 84 aa4.06□□□□□ -1.76
PTPN4-203ENST00000430976 DLEC1Q9Y238 1755 aa4.06□□□□□ -1.76
PTPN4-203ENST00000430976 ZNF831Q5JPB2 1677 aa4.06□□□□□ -1.76
PTPN4-203ENST00000430976 BCORQ6W2J9 1755 aa4.06□□□□□ -1.76
PTPN4-203ENST00000430976 PARP14Q460N5 1801 aa4.06□□□□□ -1.76
PTPN4-203ENST00000430976 IGHV1-8P0DP01 117 aa4.06□□□□□ -1.76
PTPN4-203ENST00000430976 C2orf83Q53S99 150 aa4.06□□□□□ -1.76
PTPN4-203ENST00000430976 LYPD1Q8N2G4 141 aa4.06□□□□□ -1.76
PTPN4-203ENST00000430976 LINC01465Q8N7H1 131 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms