RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 KIR2DL5BA0A0G2JPC4 375 aa13.18□□□□□ -0.3
RIF1-204ENST00000430328 SAA4P35542 130 aa13.18□□□□□ -0.3
RIF1-204ENST00000430328 KIR2DL5AQ8N109 375 aa13.18□□□□□ -0.3
RIF1-204ENST00000430328 ADCYAP1P18509 176 aa13.18□□□□□ -0.3
RIF1-204ENST00000430328 ZFP36L1Q07352 338 aaKnown RBP13.18□□□□□ -0.3
RIF1-204ENST00000430328 MRPL53Q96EL3 112 aaKnown RBP13.18□□□□□ -0.3
RIF1-204ENST00000430328 PRR25Q96S07 402 aa13.18□□□□□ -0.3
RIF1-204ENST00000430328 FAM110AQ9BQ89 295 aa13.18□□□□□ -0.3
RIF1-204ENST00000430328 ITGBL1O95965 494 aaPredicted RBP13.18□□□□□ -0.3
RIF1-204ENST00000430328 LINC01356Q8N9X3 169 aa13.18□□□□□ -0.3
RIF1-204ENST00000430328 MBD3L4A6NDZ8 208 aaPredicted RBP13.18□□□□□ -0.3
RIF1-204ENST00000430328 MBD3L3A6NE82 208 aaPredicted RBP13.18□□□□□ -0.3
RIF1-204ENST00000430328 MBD3L5A6NJ08 208 aaPredicted RBP13.18□□□□□ -0.3
RIF1-204ENST00000430328 MBD3L2Q8NHZ7 208 aaPredicted RBP13.18□□□□□ -0.3
RIF1-204ENST00000430328 PDE6GP18545 87 aa13.18□□□□□ -0.3
RIF1-204ENST00000430328 CAMK2N2Q96S95 79 aa13.17□□□□□ -0.3
RIF1-204ENST00000430328 TGFBR3LH3BV60 316 aa13.17□□□□□ -0.3
RIF1-204ENST00000430328 LTAP01374 205 aa13.17□□□□□ -0.3
RIF1-204ENST00000430328 C17orf77Q96MU5 243 aa13.17□□□□□ -0.3
RIF1-204ENST00000430328 V9GYV3 84 aa13.17□□□□□ -0.3
RIF1-204ENST00000430328 YPEL3P61236 119 aaPredicted RBP13.17□□□□□ -0.3
RIF1-204ENST00000430328 FAM231DQ6ZW35 169 aa13.17□□□□□ -0.3
RIF1-204ENST00000430328 A6NED7 52 aa13.17□□□□□ -0.3
RIF1-204ENST00000430328 TRAV23DV6A0A075B6W5 121 aa13.16□□□□□ -0.3
RIF1-204ENST00000430328 FAM236DA0A1B0GTK5 79 aa13.16□□□□□ -0.3
RIF1-204ENST00000430328 FAM236CP0DP71 79 aa13.16□□□□□ -0.3
RIF1-204ENST00000430328 PNRC2Q9NPJ4 139 aaKnown RBP13.16□□□□□ -0.3
RIF1-204ENST00000430328 IGKV1-12A0A0C4DH73 117 aa13.15□□□□□ -0.3
RIF1-204ENST00000430328 LGALS9O00182 355 aa13.15□□□□□ -0.3
RIF1-204ENST00000430328 IGKV1D-12P01611 117 aa13.15□□□□□ -0.3
RIF1-204ENST00000430328 C1orf53Q5VUE5 145 aa13.15□□□□□ -0.3
RIF1-204ENST00000430328 PCP2Q8IVA1 136 aa13.15□□□□□ -0.3
RIF1-204ENST00000430328 CD177Q8N6Q3 437 aa13.15□□□□□ -0.3
RIF1-204ENST00000430328 UPK3BQ9BT76 320 aa13.15□□□□□ -0.3
RIF1-204ENST00000430328 J3QRE1 110 aa13.15□□□□□ -0.3
RIF1-204ENST00000430328 C5orf38Q86SI9 138 aa13.15□□□□□ -0.3
RIF1-204ENST00000430328 TRBV6-6A0A0A6YYG2 114 aa13.15□□□□□ -0.3
RIF1-204ENST00000430328 CFHR1Q03591 330 aa13.15□□□□□ -0.3
RIF1-204ENST00000430328 MLANAQ16655 118 aa13.15□□□□□ -0.3
RIF1-204ENST00000430328 COX7A2LO14548 114 aa13.15□□□□□ -0.3
RIF1-204ENST00000430328 CRYGSP22914 178 aa13.15□□□□□ -0.3
RIF1-204ENST00000430328 FOXI1Q12951 378 aa13.15□□□□□ -0.3
RIF1-204ENST00000430328 IGLC1P0CG04 106 aa13.14□□□□□ -0.31
RIF1-204ENST00000430328 TMEM14BQ9NUH8 114 aa13.14□□□□□ -0.31
RIF1-204ENST00000430328 IGKV1-16P04430 117 aa13.14□□□□□ -0.31
RIF1-204ENST00000430328 SPRR3Q9UBC9 169 aa13.14□□□□□ -0.31
RIF1-204ENST00000430328 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.14□□□□□ -0.31
RIF1-204ENST00000430328 IGKV2-29A2NJV5 120 aaPredicted RBP13.14□□□□□ -0.31
RIF1-204ENST00000430328 G3V4G9 280 aa13.14□□□□□ -0.31
RIF1-204ENST00000430328 HOXB4P17483 251 aaPredicted RBP13.14□□□□□ -0.31
RIF1-204ENST00000430328 EFNA2O43921 213 aa13.13□□□□□ -0.31
RIF1-204ENST00000430328 MLST8Q9BVC4 326 aa13.13□□□□□ -0.31
RIF1-204ENST00000430328 WFDC2Q14508 124 aa13.13□□□□□ -0.31
RIF1-204ENST00000430328 Q6ZQT7 251 aa13.13□□□□□ -0.31
RIF1-204ENST00000430328 UQCRQO14949 82 aa13.13□□□□□ -0.31
RIF1-204ENST00000430328 LTBP4Q8N2S1 1624 aa13.13□□□□□ -0.31
RIF1-204ENST00000430328 LYPD3O95274 346 aa13.12□□□□□ -0.31
RIF1-204ENST00000430328 GFI1Q99684 422 aa13.12□□□□□ -0.31
RIF1-204ENST00000430328 TEX36Q5VZQ5 186 aa13.12□□□□□ -0.31
RIF1-204ENST00000430328 C20orf173Q96LM9 149 aa13.12□□□□□ -0.31
RIF1-204ENST00000430328 A4D1N5 150 aa13.12□□□□□ -0.31
RIF1-204ENST00000430328 GATA3P23771 443 aa13.12□□□□□ -0.31
RIF1-204ENST00000430328 ZC2HC1AQ96GY0 325 aa13.12□□□□□ -0.31
RIF1-204ENST00000430328 OTOGLQ3ZCN5 2332 aa13.12□□□□□ -0.31
RIF1-204ENST00000430328 ATP5EP56381 51 aaPredicted RBP13.12□□□□□ -0.31
RIF1-204ENST00000430328 NOP10Q9NPE3 64 aaKnown RBP13.12□□□□□ -0.31
RIF1-204ENST00000430328 CSPG4Q6UVK1 2322 aa13.12□□□□□ -0.31
RIF1-204ENST00000430328 WISP1O95388 367 aa13.11□□□□□ -0.31
RIF1-204ENST00000430328 SBF1O95248 1867 aa13.11□□□□□ -0.31
RIF1-204ENST00000430328 NDUFA4O00483 81 aa13.11□□□□□ -0.31
RIF1-204ENST00000430328 IGKV1-27A0A075B6S5 117 aa13.11□□□□□ -0.31
RIF1-204ENST00000430328 BPY2O14599 106 aa13.11□□□□□ -0.31
RIF1-204ENST00000430328 TMEM14CQ9P0S9 112 aa13.11□□□□□ -0.31
RIF1-204ENST00000430328 IGHV2-5P01817 119 aa13.11□□□□□ -0.31
RIF1-204ENST00000430328 TRBV10-2A0A0K0K1G8 114 aa13.11□□□□□ -0.31
RIF1-204ENST00000430328 MST1P26927 711 aa13.11□□□□□ -0.31
RIF1-204ENST00000430328 C11orf52Q96A22 123 aa13.11□□□□□ -0.31
RIF1-204ENST00000430328 FAM110DQ8TAY7 271 aaPredicted RBP13.1□□□□□ -0.31
RIF1-204ENST00000430328 ATP6V0E1O15342 81 aa13.1□□□□□ -0.31
RIF1-204ENST00000430328 LINC00643Q86TS7 51 aa13.1□□□□□ -0.31
RIF1-204ENST00000430328 GAFA1Q96PS6 74 aa13.1□□□□□ -0.31
RIF1-204ENST00000430328 DIRC1Q969H9 104 aa13.1□□□□□ -0.31
RIF1-204ENST00000430328 SERP1Q9Y6X1 66 aa13.1□□□□□ -0.31
RIF1-204ENST00000430328 VOPP1Q96AW1 172 aa13.1□□□□□ -0.31
RIF1-204ENST00000430328 TM2D2Q9BX73 214 aa13.1□□□□□ -0.31
RIF1-204ENST00000430328 LCTP09848 1927 aa13.1□□□□□ -0.31
RIF1-204ENST00000430328 A0A087WV48 116 aa13.1□□□□□ -0.31
RIF1-204ENST00000430328 GNLYP22749 145 aa13.1□□□□□ -0.31
RIF1-204ENST00000430328 DAZ2Q13117 558 aaKnown RBP13.1□□□□□ -0.31
RIF1-204ENST00000430328 DAZ4Q86SG3 579 aaKnown RBP13.1□□□□□ -0.31
RIF1-204ENST00000430328 DAZ3Q9NR90 486 aaKnown RBP13.1□□□□□ -0.31
RIF1-204ENST00000430328 SPACA3Q8IXA5 215 aa13.09□□□□□ -0.31
RIF1-204ENST00000430328 ZNF747Q9BV97 191 aa13.09□□□□□ -0.31
RIF1-204ENST00000430328 IGHV1-69DA0A0B4J2H0 117 aa13.09□□□□□ -0.31
RIF1-204ENST00000430328 Q6P435 159 aa13.09□□□□□ -0.31
RIF1-204ENST00000430328 H3BT86 120 aa13.09□□□□□ -0.31
RIF1-204ENST00000430328 ZNF883P0CG24 379 aa13.09□□□□□ -0.31
RIF1-204ENST00000430328 WI2-2373I1.2A0A1W2PRP0 233 aa13.09□□□□□ -0.31
RIF1-204ENST00000430328 C1orf195Q5TG92 126 aa13.09□□□□□ -0.31
RIF1-204ENST00000430328 IGLV3-32A0A0A0MS00 114 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms