RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 LINC00336Q6ZUF6 198 aa6.85□□□□□ -1.31
CDC42BPA-206ENST00000429440 NEXN-AS1Q8NBZ9 246 aa6.85□□□□□ -1.31
CDC42BPA-206ENST00000429440 DSCR8Q96T75 97 aa6.85□□□□□ -1.31
CDC42BPA-206ENST00000429440 ZFHX4Q86UP3 3567 aa6.85□□□□□ -1.31
CDC42BPA-206ENST00000429440 MED13Q9UHV7 2174 aa6.84□□□□□ -1.31
CDC42BPA-206ENST00000429440 A0A1W2PNU3 283 aaPredicted RBP6.84□□□□□ -1.31
CDC42BPA-206ENST00000429440 J3QQQ9 107 aa6.84□□□□□ -1.31
CDC42BPA-206ENST00000429440 ELANEP08246 267 aa6.84□□□□□ -1.31
CDC42BPA-206ENST00000429440 PFN2P35080 140 aa6.84□□□□□ -1.31
CDC42BPA-206ENST00000429440 LYPD1Q8N2G4 141 aa6.84□□□□□ -1.31
CDC42BPA-206ENST00000429440 C9orf85Q96MD7 179 aa6.84□□□□□ -1.31
CDC42BPA-206ENST00000429440 SPINK2P20155 84 aa6.84□□□□□ -1.31
CDC42BPA-206ENST00000429440 CCL8P80075 99 aa6.84□□□□□ -1.31
CDC42BPA-206ENST00000429440 TCF15Q12870 199 aa6.84□□□□□ -1.31
CDC42BPA-206ENST00000429440 LPAL2Q16609 132 aa6.84□□□□□ -1.31
CDC42BPA-206ENST00000429440 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.83□□□□□ -1.32
CDC42BPA-206ENST00000429440 IGHV4-39P01824 125 aa6.83□□□□□ -1.32
CDC42BPA-206ENST00000429440 UPK3BQ9BT76 320 aa6.83□□□□□ -1.32
CDC42BPA-206ENST00000429440 NDUFA4L2Q9NRX3 87 aa6.83□□□□□ -1.32
CDC42BPA-206ENST00000429440 RPUSD1Q9UJJ7 312 aaKnown RBP6.83□□□□□ -1.32
CDC42BPA-206ENST00000429440 CFAP47Q6ZTR5 3102 aa6.83□□□□□ -1.32
CDC42BPA-206ENST00000429440 NDUFC2-KCTD14E9PQ53 114 aa6.83□□□□□ -1.32
CDC42BPA-206ENST00000429440 CXCL13O43927 109 aa6.83□□□□□ -1.32
CDC42BPA-206ENST00000429440 EXOC3-AS1Q8N2X6 119 aa6.83□□□□□ -1.32
CDC42BPA-206ENST00000429440 DPH3P1Q9H4G8 78 aa6.83□□□□□ -1.32
CDC42BPA-206ENST00000429440 SSUH2Q9Y2M2 353 aa6.83□□□□□ -1.32
CDC42BPA-206ENST00000429440 DNAJC13O75165 2243 aa6.83□□□□□ -1.32
CDC42BPA-206ENST00000429440 PRRC2CQ9Y520 2896 aaKnown RBP6.83□□□□□ -1.32
CDC42BPA-206ENST00000429440 H3BTX0 84 aa6.82□□□□□ -1.32
CDC42BPA-206ENST00000429440 SH2D1AO60880 128 aa6.82□□□□□ -1.32
CDC42BPA-206ENST00000429440 GAS8-AS1O95177 125 aa6.82□□□□□ -1.32
CDC42BPA-206ENST00000429440 CD40P25942 277 aa6.82□□□□□ -1.32
CDC42BPA-206ENST00000429440 PSMB8P28062 276 aa6.82□□□□□ -1.32
CDC42BPA-206ENST00000429440 PAPPA-AS1Q5QFB9 102 aa6.82□□□□□ -1.32
CDC42BPA-206ENST00000429440 PRIMA1Q86XR5 153 aa6.82□□□□□ -1.32
CDC42BPA-206ENST00000429440 SERP2Q8N6R1 65 aa6.82□□□□□ -1.32
CDC42BPA-206ENST00000429440 CYSTM1Q9H1C7 97 aa6.82□□□□□ -1.32
CDC42BPA-206ENST00000429440 PCNX2A6NKB5 2137 aa6.82□□□□□ -1.32
CDC42BPA-206ENST00000429440 DOCK7Q96N67 2140 aa6.82□□□□□ -1.32
CDC42BPA-206ENST00000429440 FAM186AA6NE01 2351 aa6.82□□□□□ -1.32
CDC42BPA-206ENST00000429440 KLRB1Q12918 225 aa6.82□□□□□ -1.32
CDC42BPA-206ENST00000429440 KLHL30-AS1Q8NEE0 82 aa6.82□□□□□ -1.32
CDC42BPA-206ENST00000429440 TRAV41A0A0B4J266 112 aa6.81□□□□□ -1.32
CDC42BPA-206ENST00000429440 EPM2AB3EWF7 344 aa6.81□□□□□ -1.32
CDC42BPA-206ENST00000429440 TIMM8AO60220 97 aaPredicted RBP6.81□□□□□ -1.32
CDC42BPA-206ENST00000429440 PLGLAQ15195 96 aa6.81□□□□□ -1.32
CDC42BPA-206ENST00000429440 C1orf229Q6ZS94 237 aaPredicted RBP6.81□□□□□ -1.32
CDC42BPA-206ENST00000429440 PKIGQ9Y2B9 76 aa6.81□□□□□ -1.32
CDC42BPA-206ENST00000429440 EIF4EBP3O60516 100 aaPredicted RBP6.81□□□□□ -1.32
CDC42BPA-206ENST00000429440 RPL18AQ02543 176 aaKnown RBP6.81□□□□□ -1.32
CDC42BPA-206ENST00000429440 SPINK14Q6IE38 97 aa6.81□□□□□ -1.32
CDC42BPA-206ENST00000429440 Q6ZS46 218 aa6.81□□□□□ -1.32
CDC42BPA-206ENST00000429440 SMCR5Q8TEV8 140 aa6.81□□□□□ -1.32
CDC42BPA-206ENST00000429440 TOMM6Q96B49 74 aa6.81□□□□□ -1.32
CDC42BPA-206ENST00000429440 RNF125Q96EQ8 232 aa6.81□□□□□ -1.32
CDC42BPA-206ENST00000429440 SCGB3A1Q96QR1 104 aa6.81□□□□□ -1.32
CDC42BPA-206ENST00000429440 CTSZQ9UBR2 303 aa6.81□□□□□ -1.32
CDC42BPA-206ENST00000429440 ORMDL2Q53FV1 153 aa6.8□□□□□ -1.32
CDC42BPA-206ENST00000429440 HES7Q9BYE0 225 aa6.8□□□□□ -1.32
CDC42BPA-206ENST00000429440 PEMTQ9UBM1 199 aa6.8□□□□□ -1.32
CDC42BPA-206ENST00000429440 TRBV19A0A075B6N1 114 aa6.8□□□□□ -1.32
CDC42BPA-206ENST00000429440 TRIAP1O43715 76 aa6.8□□□□□ -1.32
CDC42BPA-206ENST00000429440 COX6CP09669 75 aa6.8□□□□□ -1.32
CDC42BPA-206ENST00000429440 HOXA4Q00056 320 aaPredicted RBP6.8□□□□□ -1.32
CDC42BPA-206ENST00000429440 Q1RN00 199 aa6.8□□□□□ -1.32
CDC42BPA-206ENST00000429440 DEFB123Q8N688 67 aa6.8□□□□□ -1.32
CDC42BPA-206ENST00000429440 RNF152Q8N8N0 203 aa6.8□□□□□ -1.32
CDC42BPA-206ENST00000429440 NRACQ8N912 160 aa6.8□□□□□ -1.32
CDC42BPA-206ENST00000429440 KLF14Q8TD94 323 aaPredicted RBP6.8□□□□□ -1.32
CDC42BPA-206ENST00000429440 MRPL36Q9P0J6 103 aaKnown RBP6.8□□□□□ -1.32
CDC42BPA-206ENST00000429440 IGKV3D-15A0A087WSY6 115 aa6.79□□□□□ -1.32
CDC42BPA-206ENST00000429440 TMEM223A0PJW6 202 aa6.79□□□□□ -1.32
CDC42BPA-206ENST00000429440 ZNF503-AS2A6NEH8 195 aa6.79□□□□□ -1.32
CDC42BPA-206ENST00000429440 IGHV3-9P01782 118 aa6.79□□□□□ -1.32
CDC42BPA-206ENST00000429440 SAA2P0DJI9 122 aaPredicted RBP6.79□□□□□ -1.32
CDC42BPA-206ENST00000429440 GATA1P15976 413 aaPredicted RBP6.79□□□□□ -1.32
CDC42BPA-206ENST00000429440 C1orf195Q5TG92 126 aa6.79□□□□□ -1.32
CDC42BPA-206ENST00000429440 MBD3L2Q8NHZ7 208 aaPredicted RBP6.79□□□□□ -1.32
CDC42BPA-206ENST00000429440 C8orf49Q96NF6 230 aa6.79□□□□□ -1.32
CDC42BPA-206ENST00000429440 DCTN5Q9BTE1 182 aa6.79□□□□□ -1.32
CDC42BPA-206ENST00000429440 ZNHIT1O43257 154 aa6.79□□□□□ -1.32
CDC42BPA-206ENST00000429440 ENSAO43768 121 aaKnown RBP6.79□□□□□ -1.32
CDC42BPA-206ENST00000429440 EGR2P11161 476 aaPredicted RBP6.79□□□□□ -1.32
CDC42BPA-206ENST00000429440 ERCC8Q13216 396 aa6.79□□□□□ -1.32
CDC42BPA-206ENST00000429440 IL17RELQ6ZVW7 336 aa6.79□□□□□ -1.32
CDC42BPA-206ENST00000429440 ARRDC1-AS1Q9H2J1 176 aa6.79□□□□□ -1.32
CDC42BPA-206ENST00000429440 DYNLRB1Q9NP97 96 aa6.79□□□□□ -1.32
CDC42BPA-206ENST00000429440 MSRB1Q9NZV6 116 aa6.79□□□□□ -1.32
CDC42BPA-206ENST00000429440 A0A096LPE4 126 aa6.78□□□□□ -1.32
CDC42BPA-206ENST00000429440 A0A1W2PPZ6 126 aa6.78□□□□□ -1.32
CDC42BPA-206ENST00000429440 LST1O00453 97 aa6.78□□□□□ -1.32
CDC42BPA-206ENST00000429440 GRPP07492 148 aa6.78□□□□□ -1.32
CDC42BPA-206ENST00000429440 C3orf36Q3SXR2 165 aa6.78□□□□□ -1.32
CDC42BPA-206ENST00000429440 DCANP1Q8TF63 244 aa6.78□□□□□ -1.32
CDC42BPA-206ENST00000429440 DSPP15924 2871 aaKnown RBP6.78□□□□□ -1.32
CDC42BPA-206ENST00000429440 TRAV12-2A0A075B6T6 113 aa6.78□□□□□ -1.32
CDC42BPA-206ENST00000429440 TRBV7-1A0A0A6YYK4 115 aa6.78□□□□□ -1.32
CDC42BPA-206ENST00000429440 H7C2G1 150 aa6.78□□□□□ -1.32
CDC42BPA-206ENST00000429440 WNT9BO14905 357 aa6.78□□□□□ -1.32
CDC42BPA-206ENST00000429440 NDUFC2O95298 119 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms