RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 TECTAO75443 2155 aa7.08□□□□□ -1.28
CTNND1-208ENST00000428599 DENND4CQ5VZ89 1909 aa7.08□□□□□ -1.28
CTNND1-208ENST00000428599 YLPM1P49750 1951 aaKnown RBP7.08□□□□□ -1.28
CTNND1-208ENST00000428599 HOXB4P17483 251 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-208ENST00000428599 RNF152Q8N8N0 203 aa7.07□□□□□ -1.28
CTNND1-208ENST00000428599 HERV-K104P63124 156 aa7.07□□□□□ -1.28
CTNND1-208ENST00000428599 IGHV2-5P01817 119 aa7.07□□□□□ -1.28
CTNND1-208ENST00000428599 GYPEP15421 78 aa7.07□□□□□ -1.28
CTNND1-208ENST00000428599 IGF2-ASQ6U949 168 aa7.07□□□□□ -1.28
CTNND1-208ENST00000428599 SHISA9B4DS77 424 aa7.07□□□□□ -1.28
CTNND1-208ENST00000428599 C17orf58Q2M2W7 97 aa7.07□□□□□ -1.28
CTNND1-208ENST00000428599 PPDPFLQ8WWR9 84 aa7.07□□□□□ -1.28
CTNND1-208ENST00000428599 IGLV3-9A0A075B6K5 115 aa7.07□□□□□ -1.28
CTNND1-208ENST00000428599 IGHV4-4A0A075B6R2 117 aa7.07□□□□□ -1.28
CTNND1-208ENST00000428599 A0A0G2JRQ6 117 aa7.07□□□□□ -1.28
CTNND1-208ENST00000428599 PRB1P04280 392 aa7.07□□□□□ -1.28
CTNND1-208ENST00000428599 SLX1AQ9BQ83 275 aa7.07□□□□□ -1.28
CTNND1-208ENST00000428599 PRO1854Q9UHT4 67 aa7.07□□□□□ -1.28
CTNND1-208ENST00000428599 ATP6V0E2Q8NHE4 81 aa7.06□□□□□ -1.28
CTNND1-208ENST00000428599 J3QQQ9 107 aa7.06□□□□□ -1.28
CTNND1-208ENST00000428599 RNASE13Q5GAN3 156 aaKnown RBP7.06□□□□□ -1.28
CTNND1-208ENST00000428599 PRSS57Q6UWY2 283 aa7.06□□□□□ -1.28
CTNND1-208ENST00000428599 SIGLEC8Q9NYZ4 499 aa7.06□□□□□ -1.28
CTNND1-208ENST00000428599 ZGRF1Q86YA3 2104 aa7.06□□□□□ -1.28
CTNND1-208ENST00000428599 COLCA2A8K830 154 aa7.06□□□□□ -1.28
CTNND1-208ENST00000428599 IGLV1-44P01699 117 aa7.06□□□□□ -1.28
CTNND1-208ENST00000428599 C15orf53Q8NAA6 179 aa7.06□□□□□ -1.28
CTNND1-208ENST00000428599 Q0VG73 95 aa7.06□□□□□ -1.28
CTNND1-208ENST00000428599 C5orf47Q569G3 176 aa7.06□□□□□ -1.28
CTNND1-208ENST00000428599 UBE2V1Q13404 147 aa7.06□□□□□ -1.28
CTNND1-208ENST00000428599 KLF2Q9Y5W3 355 aaPredicted RBP7.06□□□□□ -1.28
CTNND1-208ENST00000428599 TRAV4A0A0B4J268 109 aa7.05□□□□□ -1.28
CTNND1-208ENST00000428599 K7EQD1 137 aa7.05□□□□□ -1.28
CTNND1-208ENST00000428599 COX7A2LO14548 114 aa7.05□□□□□ -1.28
CTNND1-208ENST00000428599 ZNF493Q6ZR52 646 aa7.05□□□□□ -1.28
CTNND1-208ENST00000428599 C9orf47Q6ZRZ4 202 aa7.05□□□□□ -1.28
CTNND1-208ENST00000428599 WNK2Q9Y3S1 2297 aa7.05□□□□□ -1.28
CTNND1-208ENST00000428599 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-208ENST00000428599 MP68P56378 58 aa7.05□□□□□ -1.28
CTNND1-208ENST00000428599 DUX4L9Q6RFH8 374 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-208ENST00000428599 Q6ZRM9 215 aa7.05□□□□□ -1.28
CTNND1-208ENST00000428599 H3BQ85 93 aa7.05□□□□□ -1.28
CTNND1-208ENST00000428599 GRNP28799 593 aaKnown RBP7.05□□□□□ -1.28
CTNND1-208ENST00000428599 LRRK1Q38SD2 2015 aa7.05□□□□□ -1.28
CTNND1-208ENST00000428599 SEC61GP60059 68 aa7.05□□□□□ -1.28
CTNND1-208ENST00000428599 DEFB136Q30KP8 78 aa7.05□□□□□ -1.28
CTNND1-208ENST00000428599 Q8NFD4 153 aa7.05□□□□□ -1.28
CTNND1-208ENST00000428599 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.04□□□□□ -1.28
CTNND1-208ENST00000428599 IGKV2-29A2NJV5 120 aaPredicted RBP7.04□□□□□ -1.28
CTNND1-208ENST00000428599 IGFL2Q6UWQ7 119 aa7.04□□□□□ -1.28
CTNND1-208ENST00000428599 WDR86Q86TI4 376 aa7.04□□□□□ -1.28
CTNND1-208ENST00000428599 WIPF2Q8TF74 440 aaPredicted RBP7.04□□□□□ -1.28
CTNND1-208ENST00000428599 APRG1Q8IVJ8 170 aa7.04□□□□□ -1.28
CTNND1-208ENST00000428599 ADAMTS9Q9P2N4 1935 aa7.04□□□□□ -1.28
CTNND1-208ENST00000428599 IGHV4-28A0A0C4DH34 117 aa7.04□□□□□ -1.28
CTNND1-208ENST00000428599 F8VRH5 84 aa7.04□□□□□ -1.28
CTNND1-208ENST00000428599 HLA-DMBP28068 263 aa7.04□□□□□ -1.28
CTNND1-208ENST00000428599 SLURP1P55000 103 aa7.04□□□□□ -1.28
CTNND1-208ENST00000428599 C18orf32Q8TCD1 76 aa7.04□□□□□ -1.28
CTNND1-208ENST00000428599 Q9H8V8 135 aa7.04□□□□□ -1.28
CTNND1-208ENST00000428599 IGLL5B9A064 214 aa7.04□□□□□ -1.28
CTNND1-208ENST00000428599 DLEU1O43261 78 aa7.04□□□□□ -1.28
CTNND1-208ENST00000428599 LGALS9BQ3B8N2 356 aa7.04□□□□□ -1.28
CTNND1-208ENST00000428599 LGALS9CQ6DKI2 356 aa7.04□□□□□ -1.28
CTNND1-208ENST00000428599 PRO3102Q9H379 93 aa7.04□□□□□ -1.28
CTNND1-208ENST00000428599 KAAG1Q9UBP8 84 aa7.04□□□□□ -1.28
CTNND1-208ENST00000428599 C5orf38Q86SI9 138 aa7.03□□□□□ -1.28
CTNND1-208ENST00000428599 SMAD5-AS1Q9Y6J3 95 aa7.03□□□□□ -1.28
CTNND1-208ENST00000428599 NDUFA1O15239 70 aa7.03□□□□□ -1.28
CTNND1-208ENST00000428599 RBM3P98179 157 aaKnown RBP7.03□□□□□ -1.28
CTNND1-208ENST00000428599 TPSG1Q9NRR2 321 aa7.03□□□□□ -1.28
CTNND1-208ENST00000428599 EP400Q96L91 3159 aa7.03□□□□□ -1.28
CTNND1-208ENST00000428599 DAZ2Q13117 558 aaKnown RBP7.03□□□□□ -1.28
CTNND1-208ENST00000428599 FAM231DQ6ZW35 169 aa7.03□□□□□ -1.28
CTNND1-208ENST00000428599 DAZ4Q86SG3 579 aaKnown RBP7.03□□□□□ -1.28
CTNND1-208ENST00000428599 DAZ3Q9NR90 486 aaKnown RBP7.03□□□□□ -1.28
CTNND1-208ENST00000428599 RBAKDNA6NC62 111 aa7.03□□□□□ -1.28
CTNND1-208ENST00000428599 LYL1P12980 280 aa7.03□□□□□ -1.28
CTNND1-208ENST00000428599 ANKRD29Q8N6D5 301 aa7.03□□□□□ -1.28
CTNND1-208ENST00000428599 MRPL35Q9NZE8 188 aaKnown RBP7.03□□□□□ -1.28
CTNND1-208ENST00000428599 IGLV10-54A0A075B6I4 117 aa7.03□□□□□ -1.28
CTNND1-208ENST00000428599 A0A1W2PNU3 283 aaPredicted RBP7.03□□□□□ -1.28
CTNND1-208ENST00000428599 F8W1H4 67 aa7.03□□□□□ -1.28
CTNND1-208ENST00000428599 IFITM1P13164 125 aa7.03□□□□□ -1.28
CTNND1-208ENST00000428599 BDP1A6H8Y1 2624 aa7.02□□□□□ -1.28
CTNND1-208ENST00000428599 C8orf31Q8N9H6 132 aa7.02□□□□□ -1.29
CTNND1-208ENST00000428599 ZC2HC1AQ96GY0 325 aa7.02□□□□□ -1.29
CTNND1-208ENST00000428599 K7EMI3 77 aa7.02□□□□□ -1.29
CTNND1-208ENST00000428599 GNRH2O43555 120 aa7.02□□□□□ -1.29
CTNND1-208ENST00000428599 WT1-ASQ06250 92 aa7.02□□□□□ -1.29
CTNND1-208ENST00000428599 CEND1Q8N111 149 aa7.02□□□□□ -1.29
CTNND1-208ENST00000428599 WFDC9Q8NEX5 89 aa7.02□□□□□ -1.29
CTNND1-208ENST00000428599 PLXNB3Q9ULL4 1909 aa7.02□□□□□ -1.29
CTNND1-208ENST00000428599 IGKV1-6A0A0C4DH72 117 aa7.02□□□□□ -1.29
CTNND1-208ENST00000428599 C9orf118A6NHY6 69 aa7.02□□□□□ -1.29
CTNND1-208ENST00000428599 IGLC1P0CG04 106 aa7.02□□□□□ -1.29
CTNND1-208ENST00000428599 LENEPQ9Y5L5 61 aa7.02□□□□□ -1.29
CTNND1-208ENST00000428599 GTF3C1Q12789 2109 aa7.02□□□□□ -1.29
CTNND1-208ENST00000428599 LOC105371267A0A1B0GV96 52 aa7.02□□□□□ -1.29
CTNND1-208ENST00000428599 NPYP01303 97 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms