RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 ZNF705GA8MUZ8 300 aaPredicted RBP9.09□□□□□ -0.95
TRIM39-207ENST00000428404 UBE2CO00762 179 aa9.09□□□□□ -0.95
TRIM39-207ENST00000428404 ORM1P02763 201 aa9.09□□□□□ -0.95
TRIM39-207ENST00000428404 PRB2P02812 416 aaPredicted RBP9.09□□□□□ -0.95
TRIM39-207ENST00000428404 APOC4P55056 127 aa9.09□□□□□ -0.95
TRIM39-207ENST00000428404 ANXA2RQ3ZCQ2 193 aa9.09□□□□□ -0.95
TRIM39-207ENST00000428404 TMEM256Q8N2U0 113 aa9.09□□□□□ -0.95
TRIM39-207ENST00000428404 OR2D3Q8NGH3 330 aa9.09□□□□□ -0.95
TRIM39-207ENST00000428404 IGHV1OR15-1A0A075B7D0 117 aa9.08□□□□□ -0.96
TRIM39-207ENST00000428404 H7BYZ3 331 aa9.08□□□□□ -0.96
TRIM39-207ENST00000428404 CXCL1P09341 107 aa9.08□□□□□ -0.96
TRIM39-207ENST00000428404 FRMD6-AS1P0C7T7 363 aa9.08□□□□□ -0.96
TRIM39-207ENST00000428404 RPL19P84098 196 aaKnown RBP9.08□□□□□ -0.96
TRIM39-207ENST00000428404 DNLZQ5SXM8 178 aa9.08□□□□□ -0.96
TRIM39-207ENST00000428404 ZNF705AQ6ZN79 300 aaPredicted RBP9.08□□□□□ -0.96
TRIM39-207ENST00000428404 PYGO2Q9BRQ0 406 aa9.08□□□□□ -0.96
TRIM39-207ENST00000428404 SMIM27A0A1W2PRY6 76 aa9.07□□□□□ -0.96
TRIM39-207ENST00000428404 FAM231BA6NCW3 169 aa9.07□□□□□ -0.96
TRIM39-207ENST00000428404 A8MWL6 223 aa9.07□□□□□ -0.96
TRIM39-207ENST00000428404 FOXA3P55318 350 aaPredicted RBP9.07□□□□□ -0.96
TRIM39-207ENST00000428404 RPS20P60866 119 aaKnown RBP9.07□□□□□ -0.96
TRIM39-207ENST00000428404 MUC21Q5SSG8 566 aa9.07□□□□□ -0.96
TRIM39-207ENST00000428404 FAM159AQ6UWV7 190 aa9.07□□□□□ -0.96
TRIM39-207ENST00000428404 TSKUQ8WUA8 353 aa9.07□□□□□ -0.96
TRIM39-207ENST00000428404 GTSF1Q8WW33 167 aa9.07□□□□□ -0.96
TRIM39-207ENST00000428404 KCNS1Q96KK3 526 aa9.07□□□□□ -0.96
TRIM39-207ENST00000428404 IMMP2LQ96T52 175 aa9.07□□□□□ -0.96
TRIM39-207ENST00000428404 LINC01587Q99440 93 aa9.07□□□□□ -0.96
TRIM39-207ENST00000428404 GOLT1BQ9Y3E0 138 aa9.07□□□□□ -0.96
TRIM39-207ENST00000428404 TMSB15BA0A087X1C1 80 aa9.06□□□□□ -0.96
TRIM39-207ENST00000428404 XKRY2A2RUG3 117 aa9.06□□□□□ -0.96
TRIM39-207ENST00000428404 CXorf65A6NEN9 183 aa9.06□□□□□ -0.96
TRIM39-207ENST00000428404 GNRH2O43555 120 aa9.06□□□□□ -0.96
TRIM39-207ENST00000428404 GZMBP10144 247 aa9.06□□□□□ -0.96
TRIM39-207ENST00000428404 Q6ZWC4 215 aa9.06□□□□□ -0.96
TRIM39-207ENST00000428404 GFRA4Q9GZZ7 299 aa9.06□□□□□ -0.96
TRIM39-207ENST00000428404 IL36BQ9NZH7 164 aa9.06□□□□□ -0.96
TRIM39-207ENST00000428404 NAGKQ9UJ70 344 aa9.06□□□□□ -0.96
TRIM39-207ENST00000428404 PRM2P04554 102 aa9.05□□□□□ -0.96
TRIM39-207ENST00000428404 TYMSP04818 313 aa9.05□□□□□ -0.96
TRIM39-207ENST00000428404 IGLC6P0CF74 106 aa9.05□□□□□ -0.96
TRIM39-207ENST00000428404 SSBP4Q9BWG4 385 aaPredicted RBP9.05□□□□□ -0.96
TRIM39-207ENST00000428404 TP53TG3Q9ULZ0 132 aa9.05□□□□□ -0.96
TRIM39-207ENST00000428404 MEGF8Q7Z7M0 2845 aa9.05□□□□□ -0.96
TRIM39-207ENST00000428404 IGHV3-16A0A0C4DH30 117 aa9.04□□□□□ -0.96
TRIM39-207ENST00000428404 GRIFINA4D1Z8 144 aa9.04□□□□□ -0.96
TRIM39-207ENST00000428404 RNASE3P12724 160 aaKnown RBP9.04□□□□□ -0.96
TRIM39-207ENST00000428404 RNF183Q96D59 192 aa9.04□□□□□ -0.96
TRIM39-207ENST00000428404 YPEL4Q96NS1 127 aa9.04□□□□□ -0.96
TRIM39-207ENST00000428404 NEU1Q99519 415 aa9.04□□□□□ -0.96
TRIM39-207ENST00000428404 TMEM208Q9BTX3 173 aa9.04□□□□□ -0.96
TRIM39-207ENST00000428404 SCRT2Q9NQ03 307 aa9.04□□□□□ -0.96
TRIM39-207ENST00000428404 SMCO4Q9NRQ5 59 aa9.04□□□□□ -0.96
TRIM39-207ENST00000428404 X6R8D5 127 aa9.04□□□□□ -0.96
TRIM39-207ENST00000428404 TRGV11A0A075B6L2 103 aa9.03□□□□□ -0.96
TRIM39-207ENST00000428404 IGHV3OR16-12A0A075B7B8 117 aa9.03□□□□□ -0.96
TRIM39-207ENST00000428404 A0A1W2PPQ1 181 aa9.03□□□□□ -0.96
TRIM39-207ENST00000428404 HIGD1CA8MV81 97 aa9.03□□□□□ -0.96
TRIM39-207ENST00000428404 SNAI2O43623 268 aa9.03□□□□□ -0.96
TRIM39-207ENST00000428404 SCO1O75880 301 aa9.03□□□□□ -0.96
TRIM39-207ENST00000428404 MED14OSP0DP75 135 aa9.03□□□□□ -0.96
TRIM39-207ENST00000428404 AZU1P20160 251 aa9.03□□□□□ -0.96
TRIM39-207ENST00000428404 CTRLP40313 264 aa9.03□□□□□ -0.96
TRIM39-207ENST00000428404 ASIPP42127 132 aa9.03□□□□□ -0.96
TRIM39-207ENST00000428404 FAM3BP58499 235 aaPredicted RBP9.03□□□□□ -0.96
TRIM39-207ENST00000428404 C11orf72Q8NBR9 251 aa9.03□□□□□ -0.96
TRIM39-207ENST00000428404 NUP35Q8NFH5 326 aa9.03□□□□□ -0.96
TRIM39-207ENST00000428404 MDFICQ9P1T7 246 aa9.03□□□□□ -0.96
TRIM39-207ENST00000428404 TP53TG1Q9Y2A0 90 aa9.03□□□□□ -0.96
TRIM39-207ENST00000428404 SMIM9A6NGZ8 99 aa9.02□□□□□ -0.97
TRIM39-207ENST00000428404 CBY3A6NI87 242 aa9.02□□□□□ -0.97
TRIM39-207ENST00000428404 SPRY2O43597 315 aa9.02□□□□□ -0.97
TRIM39-207ENST00000428404 OR5AL1P0C617 328 aa9.02□□□□□ -0.97
TRIM39-207ENST00000428404 ARMS2P0C7Q2 107 aa9.02□□□□□ -0.97
TRIM39-207ENST00000428404 TCL1AP56279 114 aa9.02□□□□□ -0.97
TRIM39-207ENST00000428404 DEFB135Q30KP9 77 aa9.02□□□□□ -0.97
TRIM39-207ENST00000428404 TMEM88Q6PEY1 159 aa9.02□□□□□ -0.97
TRIM39-207ENST00000428404 LYZL1Q6UWQ5 148 aa9.02□□□□□ -0.97
TRIM39-207ENST00000428404 CBLN2Q8IUK8 224 aa9.02□□□□□ -0.97
TRIM39-207ENST00000428404 FER1L6-AS1Q8NA97 138 aa9.02□□□□□ -0.97
TRIM39-207ENST00000428404 RNASE8Q8TDE3 154 aaKnown RBP9.02□□□□□ -0.97
TRIM39-207ENST00000428404 C9orf85Q96MD7 179 aa9.02□□□□□ -0.97
TRIM39-207ENST00000428404 RCHY1Q96PM5 261 aa9.02□□□□□ -0.97
TRIM39-207ENST00000428404 CNFNQ9BYD5 112 aa9.02□□□□□ -0.97
TRIM39-207ENST00000428404 NAT8BQ9UHF3 227 aa9.02□□□□□ -0.97
TRIM39-207ENST00000428404 TRAV9-1A0A075B6T8 112 aa9.01□□□□□ -0.97
TRIM39-207ENST00000428404 PLAC8L1A1L4L8 177 aa9.01□□□□□ -0.97
TRIM39-207ENST00000428404 F2Z2F3 143 aa9.01□□□□□ -0.97
TRIM39-207ENST00000428404 HTN1P15515 57 aa9.01□□□□□ -0.97
TRIM39-207ENST00000428404 DEFB121Q5J5C9 76 aa9.01□□□□□ -0.97
TRIM39-207ENST00000428404 WDR73Q6P4I2 378 aa9.01□□□□□ -0.97
TRIM39-207ENST00000428404 ZNF493Q6ZR52 646 aa9.01□□□□□ -0.97
TRIM39-207ENST00000428404 SBSPONQ8IVN8 264 aa9.01□□□□□ -0.97
TRIM39-207ENST00000428404 TMEM263Q8WUH6 116 aaKnown RBP9.01□□□□□ -0.97
TRIM39-207ENST00000428404 OVOL2Q9BRP0 275 aa9.01□□□□□ -0.97
TRIM39-207ENST00000428404 IGHV4-4A0A075B6R2 117 aa9□□□□□ -0.97
TRIM39-207ENST00000428404 H3BVH4 76 aa9□□□□□ -0.97
TRIM39-207ENST00000428404 S100PP25815 95 aa9□□□□□ -0.97
TRIM39-207ENST00000428404 S100A4P26447 101 aaKnown RBP9□□□□□ -0.97
TRIM39-207ENST00000428404 ELOBQ15370 118 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms