RNA–Protein interactions for RNA: ENST00000428128.1

RGPD1-203, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

TSL 1 (best)

Gene RGPD1, Length 3,479 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-203ENST00000428128 SVBPQ8N300 66 aa2.14□□□□□ -2.07
RGPD1-203ENST00000428128 OR10G2Q8NGC3 310 aa2.14□□□□□ -2.07
RGPD1-203ENST00000428128 OR5C1Q8NGR4 320 aa2.14□□□□□ -2.07
RGPD1-203ENST00000428128 PLA2G12AQ9BZM1 189 aa2.14□□□□□ -2.07
RGPD1-203ENST00000428128 LRP1BQ9NZR2 4599 aa2.14□□□□□ -2.07
RGPD1-203ENST00000428128 SPENQ96T58 3664 aaKnown RBP2.14□□□□□ -2.07
RGPD1-203ENST00000428128 COL6A5A8TX70 2615 aa2.14□□□□□ -2.07
RGPD1-203ENST00000428128 WDFY3Q8IZQ1 3526 aa2.14□□□□□ -2.07
RGPD1-203ENST00000428128 TRBV20-1A0A075B6N2 111 aa2.14□□□□□ -2.07
RGPD1-203ENST00000428128 TRAV19A0A0A6YYK7 116 aa2.14□□□□□ -2.07
RGPD1-203ENST00000428128 OR2T8A6NH00 312 aa2.14□□□□□ -2.07
RGPD1-203ENST00000428128 BMPR1BO00238 502 aa2.14□□□□□ -2.07
RGPD1-203ENST00000428128 RER1O15258 196 aa2.14□□□□□ -2.07
RGPD1-203ENST00000428128 NDUFB3O43676 98 aa2.14□□□□□ -2.07
RGPD1-203ENST00000428128 SCGB1C2P0DMR2 95 aa2.14□□□□□ -2.07
RGPD1-203ENST00000428128 SCXQ7RTU7 201 aa2.14□□□□□ -2.07
RGPD1-203ENST00000428128 SCGB1C1Q8TD33 95 aa2.14□□□□□ -2.07
RGPD1-203ENST00000428128 CAMK2N2Q96S95 79 aa2.14□□□□□ -2.07
RGPD1-203ENST00000428128 TSSK6Q9BXA6 273 aa2.14□□□□□ -2.07
RGPD1-203ENST00000428128 BCL2L10Q9HD36 194 aa2.14□□□□□ -2.07
RGPD1-203ENST00000428128 ABRACLQ9P1F3 81 aa2.14□□□□□ -2.07
RGPD1-203ENST00000428128 MEGF8Q7Z7M0 2845 aa2.14□□□□□ -2.07
RGPD1-203ENST00000428128 OR1I1O60431 355 aa2.14□□□□□ -2.07
RGPD1-203ENST00000428128 CD14P08571 375 aa2.14□□□□□ -2.07
RGPD1-203ENST00000428128 C16orf47Q6ZP98 133 aaPredicted RBP2.14□□□□□ -2.07
RGPD1-203ENST00000428128 Q6ZS52 159 aa2.14□□□□□ -2.07
RGPD1-203ENST00000428128 ZNF525Q8N782 197 aa2.14□□□□□ -2.07
RGPD1-203ENST00000428128 NEUROG1Q92886 237 aa2.14□□□□□ -2.07
RGPD1-203ENST00000428128 TIMM17AQ99595 171 aa2.14□□□□□ -2.07
RGPD1-203ENST00000428128 CHCHD7Q9BUK0 85 aa2.14□□□□□ -2.07
RGPD1-203ENST00000428128 POLR2J2Q9GZM3 115 aaKnown RBP2.14□□□□□ -2.07
RGPD1-203ENST00000428128 POLR2J3Q9H1A7 115 aaKnown RBP2.14□□□□□ -2.07
RGPD1-203ENST00000428128 C11orf1Q9H5F2 150 aa2.14□□□□□ -2.07
RGPD1-203ENST00000428128 NAA60Q9H7X0 242 aa2.14□□□□□ -2.07
RGPD1-203ENST00000428128 TRAV13-1A0A0B4J241 112 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 CGB3P0DN86 165 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 CGB7P0DN87 165 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 COL8A2P25067 703 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 NFYBP25208 207 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 FXYD6P3P58550 94 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 TAS2R45P59539 299 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 REG3AQ06141 175 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.13□□□□□ -2.07
RGPD1-203ENST00000428128 AADACL3Q5VUY0 350 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 ZNF322Q6U7Q0 402 aaPredicted RBP2.13□□□□□ -2.07
RGPD1-203ENST00000428128 Q6ZUT4 128 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 FP248Q71RG6 208 aaPredicted RBP2.13□□□□□ -2.07
RGPD1-203ENST00000428128 Q8NBF4 154 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 OR10P1Q8NGE3 313 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 RMI2Q96E14 147 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 NAA38Q9BRA0 125 aaKnown RBP2.13□□□□□ -2.07
RGPD1-203ENST00000428128 SHANK2-AS3Q9BTD1 123 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 C8orf17Q9NRJ1 99 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 TNFRSF19Q9NS68 423 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 ZNF586Q9NXT0 402 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 CACFD1Q9UGQ2 172 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 NINQ8N4C6 2090 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 CELSR3Q9NYQ7 3312 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 COL12A1Q99715 3063 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 SPTBN1Q01082 2364 aaKnown RBP2.13□□□□□ -2.07
RGPD1-203ENST00000428128 UTP20O75691 2785 aaKnown RBP2.13□□□□□ -2.07
RGPD1-203ENST00000428128 ANKRD12Q6UB98 2062 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 C1orf196B1AJZ1 125 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 PRM2P04554 102 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 COX6B1P14854 86 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 CXCL5P42830 114 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 ZNF83P51522 516 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 RBM11P57052 281 aaKnown RBP2.13□□□□□ -2.07
RGPD1-203ENST00000428128 ZNF627Q7L945 461 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 HIST3H2BBQ8N257 126 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 OR5D16Q8NGK9 328 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 SLC35B3Q9H1N7 401 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 BANF2Q9H503 90 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 SCRT2Q9NQ03 307 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 C21orf62Q9NYP8 219 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 SERP1Q9Y6X1 66 aa2.13□□□□□ -2.07
RGPD1-203ENST00000428128 A0A087WWC5 75 aa2.12□□□□□ -2.07
RGPD1-203ENST00000428128 C7orf71A4D174 169 aa2.12□□□□□ -2.07
RGPD1-203ENST00000428128 ZNF705DP0CH99 300 aaPredicted RBP2.12□□□□□ -2.07
RGPD1-203ENST00000428128 SRP14P37108 136 aaKnown RBP2.12□□□□□ -2.07
RGPD1-203ENST00000428128 CDK5R1Q15078 307 aa2.12□□□□□ -2.07
RGPD1-203ENST00000428128 PYDC2Q56P42 97 aa2.12□□□□□ -2.07
RGPD1-203ENST00000428128 C7orf65Q6ZTY9 151 aa2.12□□□□□ -2.07
RGPD1-203ENST00000428128 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.12□□□□□ -2.07
RGPD1-203ENST00000428128 Q8NDZ9 215 aa2.12□□□□□ -2.07
RGPD1-203ENST00000428128 ZC2HC1AQ96GY0 325 aa2.12□□□□□ -2.07
RGPD1-203ENST00000428128 CHCHD5Q9BSY4 110 aa2.12□□□□□ -2.07
RGPD1-203ENST00000428128 DERL1Q9BUN8 251 aa2.12□□□□□ -2.07
RGPD1-203ENST00000428128 DPY30Q9C005 99 aa2.12□□□□□ -2.07
RGPD1-203ENST00000428128 KIAA1109Q2LD37 5005 aa2.12□□□□□ -2.07
RGPD1-203ENST00000428128 KMT2CQ8NEZ4 4911 aaKnown RBP2.12□□□□□ -2.07
RGPD1-203ENST00000428128 TRRAPQ9Y4A5 3859 aa2.12□□□□□ -2.07
RGPD1-203ENST00000428128 TMEM256-PLSCR3K7ERE1 68 aa2.12□□□□□ -2.07
RGPD1-203ENST00000428128 GEMIN2O14893 280 aaKnown RBP2.12□□□□□ -2.07
RGPD1-203ENST00000428128 APOC3P02656 99 aa2.12□□□□□ -2.07
RGPD1-203ENST00000428128 IGHV1-8P0DP01 117 aa2.12□□□□□ -2.07
RGPD1-203ENST00000428128 PYYP10082 97 aa2.12□□□□□ -2.07
RGPD1-203ENST00000428128 IFITM1P13164 125 aa2.12□□□□□ -2.07
RGPD1-203ENST00000428128 SNCAP37840 140 aa2.12□□□□□ -2.07
RGPD1-203ENST00000428128 DYNLT3P51808 116 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms