RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 ZFP30Q9Y2G7 519 aa17.79■□□□□ 0.44
HERPUD2-205ENST00000427455 RYR2Q92736 4967 aa17.78■□□□□ 0.44
HERPUD2-205ENST00000427455 GAGE12BA1L429 117 aa17.78■□□□□ 0.44
HERPUD2-205ENST00000427455 GAGE7O76087 117 aa17.78■□□□□ 0.44
HERPUD2-205ENST00000427455 IFNA1P01562 189 aa17.78■□□□□ 0.44
HERPUD2-205ENST00000427455 GAGE12FP0CL80 117 aa17.78■□□□□ 0.44
HERPUD2-205ENST00000427455 GAGE12GP0CL81 117 aa17.78■□□□□ 0.44
HERPUD2-205ENST00000427455 GAGE12IP0CL82 117 aa17.78■□□□□ 0.44
HERPUD2-205ENST00000427455 Q6ZTI0 123 aa17.78■□□□□ 0.44
HERPUD2-205ENST00000427455 LINC00476Q8WZB0 136 aa17.78■□□□□ 0.44
HERPUD2-205ENST00000427455 TXNDC17Q9BRA2 123 aa17.78■□□□□ 0.44
HERPUD2-205ENST00000427455 SDF2L1Q9HCN8 221 aa17.78■□□□□ 0.44
HERPUD2-205ENST00000427455 APLNQ9ULZ1 77 aa17.78■□□□□ 0.44
HERPUD2-205ENST00000427455 SPINK4O60575 86 aa17.77■□□□□ 0.44
HERPUD2-205ENST00000427455 S100A9P06702 114 aaKnown RBP17.77■□□□□ 0.44
HERPUD2-205ENST00000427455 MDFICQ9P1T7 246 aa17.77■□□□□ 0.44
HERPUD2-205ENST00000427455 TRGV1A0A0A0MS02 117 aa17.76■□□□□ 0.43
HERPUD2-205ENST00000427455 LTAP01374 205 aa17.76■□□□□ 0.43
HERPUD2-205ENST00000427455 BLOC1S1P78537 153 aa17.76■□□□□ 0.43
HERPUD2-205ENST00000427455 COX8CQ7Z4L0 72 aa17.76■□□□□ 0.43
HERPUD2-205ENST00000427455 NDUFAF3Q9BU61 184 aa17.76■□□□□ 0.43
HERPUD2-205ENST00000427455 TYMSP04818 313 aa17.75■□□□□ 0.43
HERPUD2-205ENST00000427455 LGALS9BQ3B8N2 356 aa17.75■□□□□ 0.43
HERPUD2-205ENST00000427455 C11orf21Q9P2W6 132 aa17.75■□□□□ 0.43
HERPUD2-205ENST00000427455 BCL2P10415 239 aa17.74■□□□□ 0.43
HERPUD2-205ENST00000427455 MEF2BQ02080 365 aaPredicted RBP17.74■□□□□ 0.43
HERPUD2-205ENST00000427455 C11orf52Q96A22 123 aa17.74■□□□□ 0.43
HERPUD2-205ENST00000427455 ZC2HC1AQ96GY0 325 aa17.74■□□□□ 0.43
HERPUD2-205ENST00000427455 C18orf15Q96N68 181 aa17.74■□□□□ 0.43
HERPUD2-205ENST00000427455 SPXQ9BT56 116 aa17.74■□□□□ 0.43
HERPUD2-205ENST00000427455 TRGV2A0A075B6R0 118 aa17.73■□□□□ 0.43
HERPUD2-205ENST00000427455 IGHV3-16A0A0C4DH30 117 aa17.73■□□□□ 0.43
HERPUD2-205ENST00000427455 F5H768 121 aa17.73■□□□□ 0.43
HERPUD2-205ENST00000427455 GNRH2O43555 120 aa17.73■□□□□ 0.43
HERPUD2-205ENST00000427455 TAGLN2P37802 199 aaKnown RBP17.73■□□□□ 0.43
HERPUD2-205ENST00000427455 TMEM88Q6PEY1 159 aa17.73■□□□□ 0.43
HERPUD2-205ENST00000427455 FABP5P3A8MUU1 101 aa17.72■□□□□ 0.43
HERPUD2-205ENST00000427455 MRPL16Q9NX20 251 aaKnown RBP17.72■□□□□ 0.43
HERPUD2-205ENST00000427455 PDE6DO43924 150 aa17.71■□□□□ 0.43
HERPUD2-205ENST00000427455 LY6G6CO95867 125 aa17.71■□□□□ 0.43
HERPUD2-205ENST00000427455 LGALS9CQ6DKI2 356 aa17.71■□□□□ 0.43
HERPUD2-205ENST00000427455 FAM162BQ5T6X4 162 aa17.7■□□□□ 0.42
HERPUD2-205ENST00000427455 VAX2Q9UIW0 290 aa17.7■□□□□ 0.42
HERPUD2-205ENST00000427455 RPL35P42766 123 aaKnown RBP17.69■□□□□ 0.42
HERPUD2-205ENST00000427455 CRIP1P50238 77 aa17.69■□□□□ 0.42
HERPUD2-205ENST00000427455 LYPD6BQ8NI32 183 aa17.69■□□□□ 0.42
HERPUD2-205ENST00000427455 VPS13DQ5THJ4 4388 aa17.68■□□□□ 0.42
HERPUD2-205ENST00000427455 SH2D1AO60880 128 aa17.68■□□□□ 0.42
HERPUD2-205ENST00000427455 BAGE2Q86Y30 109 aa17.68■□□□□ 0.42
HERPUD2-205ENST00000427455 NHLRC2Q8NBF2 726 aa17.68■□□□□ 0.42
HERPUD2-205ENST00000427455 IGKV3D-20A0A0C4DH25 116 aa17.67■□□□□ 0.42
HERPUD2-205ENST00000427455 ZNF674Q2M3X9 581 aa17.67■□□□□ 0.42
HERPUD2-205ENST00000427455 C15orf53Q8NAA6 179 aa17.67■□□□□ 0.42
HERPUD2-205ENST00000427455 RASL10AQ92737 203 aa17.67■□□□□ 0.42
HERPUD2-205ENST00000427455 DERL1Q9BUN8 251 aa17.67■□□□□ 0.42
HERPUD2-205ENST00000427455 MLST8Q9BVC4 326 aa17.67■□□□□ 0.42
HERPUD2-205ENST00000427455 M0R2P5 195 aa17.66■□□□□ 0.42
HERPUD2-205ENST00000427455 HOXA5P20719 270 aa17.66■□□□□ 0.42
HERPUD2-205ENST00000427455 HYDINQ4G0P3 5121 aa17.65■□□□□ 0.42
HERPUD2-205ENST00000427455 B4DEV8 164 aa17.65■□□□□ 0.42
HERPUD2-205ENST00000427455 ORM1P02763 201 aa17.65■□□□□ 0.42
HERPUD2-205ENST00000427455 OR5I1Q13606 314 aa17.65■□□□□ 0.42
HERPUD2-205ENST00000427455 C9orf85Q96MD7 179 aa17.64■□□□□ 0.41
HERPUD2-205ENST00000427455 MUC4Q99102 2169 aa17.64■□□□□ 0.41
HERPUD2-205ENST00000427455 ASIPP42127 132 aa17.63■□□□□ 0.41
HERPUD2-205ENST00000427455 CENPWQ5EE01 88 aa17.63■□□□□ 0.41
HERPUD2-205ENST00000427455 MED9Q9NWA0 146 aa17.63■□□□□ 0.41
HERPUD2-205ENST00000427455 TRAV26-1A0A087WT03 109 aa17.62■□□□□ 0.41
HERPUD2-205ENST00000427455 KRBOX1C9JBD0 128 aa17.62■□□□□ 0.41
HERPUD2-205ENST00000427455 M0R036 132 aa17.62■□□□□ 0.41
HERPUD2-205ENST00000427455 P0DMU3 169 aa17.62■□□□□ 0.41
HERPUD2-205ENST00000427455 FAM231AP0DMU4 169 aa17.62■□□□□ 0.41
HERPUD2-205ENST00000427455 FAM231CP0DMU5 169 aa17.62■□□□□ 0.41
HERPUD2-205ENST00000427455 RNASE3P12724 160 aaKnown RBP17.62■□□□□ 0.41
HERPUD2-205ENST00000427455 LINC01559Q495D7 138 aa17.62■□□□□ 0.41
HERPUD2-205ENST00000427455 TEX261Q6UWH6 196 aa17.62■□□□□ 0.41
HERPUD2-205ENST00000427455 RBFOX3A6NFN3 312 aa17.61■□□□□ 0.41
HERPUD2-205ENST00000427455 IGHV3-53P01767 116 aa17.61■□□□□ 0.41
HERPUD2-205ENST00000427455 S100A4P26447 101 aaKnown RBP17.61■□□□□ 0.41
HERPUD2-205ENST00000427455 GNG4P50150 75 aa17.6■□□□□ 0.41
HERPUD2-205ENST00000427455 ZNF506Q5JVG8 444 aa17.6■□□□□ 0.41
HERPUD2-205ENST00000427455 SMIM12Q96EX1 92 aa17.6■□□□□ 0.41
HERPUD2-205ENST00000427455 H3BNG1 76 aa17.59■□□□□ 0.41
HERPUD2-205ENST00000427455 ZNF876PQ49A33 203 aa17.59■□□□□ 0.41
HERPUD2-205ENST00000427455 DNLZQ5SXM8 178 aa17.59■□□□□ 0.41
HERPUD2-205ENST00000427455 PRR27Q6MZM9 219 aa17.59■□□□□ 0.41
HERPUD2-205ENST00000427455 IL36BQ9NZH7 164 aa17.59■□□□□ 0.41
HERPUD2-205ENST00000427455 TRAV4A0A0B4J268 109 aa17.58■□□□□ 0.4
HERPUD2-205ENST00000427455 A0A0J9YY99 117 aa17.58■□□□□ 0.4
HERPUD2-205ENST00000427455 RAB19A4D1S5 217 aa17.58■□□□□ 0.4
HERPUD2-205ENST00000427455 NUDT3O95989 172 aa17.58■□□□□ 0.4
HERPUD2-205ENST00000427455 PTH2Q96A98 100 aa17.58■□□□□ 0.4
HERPUD2-205ENST00000427455 C9JCJ5 164 aa17.57■□□□□ 0.4
HERPUD2-205ENST00000427455 TMEM250H0YL14 139 aa17.57■□□□□ 0.4
HERPUD2-205ENST00000427455 TOR2AQ5JU69 321 aa17.57■□□□□ 0.4
HERPUD2-205ENST00000427455 ZNF479Q96JC4 524 aa17.57■□□□□ 0.4
HERPUD2-205ENST00000427455 TRBV20OR9-2A0A075B6H5 130 aa17.56■□□□□ 0.4
HERPUD2-205ENST00000427455 TMSB15BA0A087X1C1 80 aa17.56■□□□□ 0.4
HERPUD2-205ENST00000427455 H3BVH4 76 aa17.56■□□□□ 0.4
HERPUD2-205ENST00000427455 IGLV2-8P01709 118 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms