RNA–Protein interactions for RNA: ENST00000427444.1

HFM1-202, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-202ENST00000427444 Q5XG85 94 aa-0.58□□□□□ -2.5
HFM1-202ENST00000427444 FAM213BQ8TBF2 198 aa-0.58□□□□□ -2.5
HFM1-202ENST00000427444 AP3S1Q92572 193 aa-0.58□□□□□ -2.5
HFM1-202ENST00000427444 CHD9Q3L8U1 2897 aa-0.58□□□□□ -2.5
HFM1-202ENST00000427444 SPAG17Q6Q759 2223 aa-0.58□□□□□ -2.5
HFM1-202ENST00000427444 TCOF1Q13428 1488 aaKnown RBP-0.59□□□□□ -2.5
HFM1-202ENST00000427444 A0A0G2JMM0 328 aa-0.59□□□□□ -2.5
HFM1-202ENST00000427444 TRBV27A0A0K0K1C4 114 aa-0.59□□□□□ -2.5
HFM1-202ENST00000427444 IFITM5A6NNB3 132 aa-0.59□□□□□ -2.5
HFM1-202ENST00000427444 S100A11P31949 105 aa-0.59□□□□□ -2.5
HFM1-202ENST00000427444 KRTAP20-2Q3LI61 65 aa-0.59□□□□□ -2.5
HFM1-202ENST00000427444 LINC00305Q7Z4B0 112 aa-0.59□□□□□ -2.5
HFM1-202ENST00000427444 TEX29Q8N6K0 151 aa-0.59□□□□□ -2.5
HFM1-202ENST00000427444 HSPG2P98160 4391 aa-0.59□□□□□ -2.5
HFM1-202ENST00000427444 HERC1Q15751 4861 aa-0.59□□□□□ -2.5
HFM1-202ENST00000427444 RREB1Q92766 1687 aa-0.59□□□□□ -2.5
HFM1-202ENST00000427444 KMT2AQ03164 3969 aa-0.6□□□□□ -2.5
HFM1-202ENST00000427444 SLC25A4P12235 298 aa-0.6□□□□□ -2.51
HFM1-202ENST00000427444 KRTAP19-7Q3SYF9 63 aa-0.6□□□□□ -2.51
HFM1-202ENST00000427444 CACNA1AO00555 2505 aa-0.6□□□□□ -2.51
HFM1-202ENST00000427444 CPDO75976 1380 aa-0.6□□□□□ -2.51
HFM1-202ENST00000427444 EIF3AQ14152 1382 aaKnown RBP-0.6□□□□□ -2.51
HFM1-202ENST00000427444 MAP2P11137 1827 aaKnown RBP-0.61□□□□□ -2.51
HFM1-202ENST00000427444 YTHDC2Q9H6S0 1430 aaKnown RBP-0.61□□□□□ -2.51
HFM1-202ENST00000427444 EP300Q09472 2414 aaPredicted RBP-0.61□□□□□ -2.51
HFM1-202ENST00000427444 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.61□□□□□ -2.51
HFM1-202ENST00000427444 ETV6P41212 452 aa-0.61□□□□□ -2.51
HFM1-202ENST00000427444 DCUN1D2Q6PH85 259 aa-0.61□□□□□ -2.51
HFM1-202ENST00000427444 MORN4Q8NDC4 146 aa-0.61□□□□□ -2.51
HFM1-202ENST00000427444 DSCR8Q96T75 97 aa-0.61□□□□□ -2.51
HFM1-202ENST00000427444 SMIM7Q9BQ49 75 aa-0.61□□□□□ -2.51
HFM1-202ENST00000427444 ATG5Q9H1Y0 275 aa-0.61□□□□□ -2.51
HFM1-202ENST00000427444 LAMTOR2Q9Y2Q5 125 aa-0.61□□□□□ -2.51
HFM1-202ENST00000427444 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.61□□□□□ -2.51
HFM1-202ENST00000427444 CDK12Q9NYV4 1490 aaPredicted RBP-0.61□□□□□ -2.51
HFM1-202ENST00000427444 BSNQ9UPA5 3926 aa-0.61□□□□□ -2.51
HFM1-202ENST00000427444 CREBBPQ92793 2442 aa-0.62□□□□□ -2.51
HFM1-202ENST00000427444 DLEC1Q9Y238 1755 aa-0.62□□□□□ -2.51
HFM1-202ENST00000427444 FAT3Q8TDW7 4589 aa-0.62□□□□□ -2.51
HFM1-202ENST00000427444 TRAV13-1A0A0B4J241 112 aa-0.62□□□□□ -2.51
HFM1-202ENST00000427444 CCKP06307 115 aa-0.62□□□□□ -2.51
HFM1-202ENST00000427444 BLCAPP62952 87 aa-0.62□□□□□ -2.51
HFM1-202ENST00000427444 BASP1P80723 227 aaKnown RBP-0.62□□□□□ -2.51
HFM1-202ENST00000427444 IDO2Q6ZQW0 420 aa-0.62□□□□□ -2.51
HFM1-202ENST00000427444 OR51A4Q8NGJ6 313 aa-0.62□□□□□ -2.51
HFM1-202ENST00000427444 PRR15LQ9BU68 103 aa-0.62□□□□□ -2.51
HFM1-202ENST00000427444 FAM135BQ49AJ0 1406 aa-0.63□□□□□ -2.51
HFM1-202ENST00000427444 RIF1Q5UIP0 2472 aaKnown RBP-0.63□□□□□ -2.51
HFM1-202ENST00000427444 H3BMG7 143 aa-0.63□□□□□ -2.51
HFM1-202ENST00000427444 SERPINB1P30740 379 aa-0.63□□□□□ -2.51
HFM1-202ENST00000427444 MRPS15P82914 257 aaKnown RBP-0.63□□□□□ -2.51
HFM1-202ENST00000427444 COX6A2Q02221 97 aa-0.63□□□□□ -2.51
HFM1-202ENST00000427444 HOPXQ9BPY8 73 aaPredicted RBP-0.63□□□□□ -2.51
HFM1-202ENST00000427444 BLMP54132 1417 aaPredicted RBP-0.64□□□□□ -2.51
HFM1-202ENST00000427444 ZANQ9Y493 2812 aa-0.64□□□□□ -2.51
HFM1-202ENST00000427444 LPAP08519 4548 aa-0.64□□□□□ -2.51
HFM1-202ENST00000427444 MAP1LC3B2A6NCE7 125 aa-0.64□□□□□ -2.51
HFM1-202ENST00000427444 LXNQ9BS40 222 aa-0.64□□□□□ -2.51
HFM1-202ENST00000427444 FAM208BQ5VWN6 2430 aa-0.64□□□□□ -2.51
HFM1-202ENST00000427444 MED13LQ71F56 2210 aa-0.64□□□□□ -2.51
HFM1-202ENST00000427444 TENM2Q9NT68 2774 aa-0.64□□□□□ -2.51
HFM1-202ENST00000427444 SRRM2Q9UQ35 2752 aaKnown RBP-0.64□□□□□ -2.51
HFM1-202ENST00000427444 MCRIP1C9JLW8 97 aa-0.65□□□□□ -2.51
HFM1-202ENST00000427444 CRYGSP22914 178 aa-0.65□□□□□ -2.51
HFM1-202ENST00000427444 C3orf33Q6P1S2 294 aa-0.65□□□□□ -2.51
HFM1-202ENST00000427444 OR5A2Q8NGI9 324 aa-0.65□□□□□ -2.51
HFM1-202ENST00000427444 PPP5D1E7EU14 171 aa-0.66□□□□□ -2.52
HFM1-202ENST00000427444 SRP9P49458 86 aaKnown RBP-0.66□□□□□ -2.52
HFM1-202ENST00000427444 CRYBA4P53673 196 aa-0.66□□□□□ -2.52
HFM1-202ENST00000427444 UNQ5815/PRO19632Q6UWF5 114 aa-0.66□□□□□ -2.52
HFM1-202ENST00000427444 HRCT1Q6UXD1 115 aa-0.66□□□□□ -2.52
HFM1-202ENST00000427444 CCDC32Q9BV29 185 aa-0.66□□□□□ -2.52
HFM1-202ENST00000427444 BOLA2Q9H3K6 86 aa-0.66□□□□□ -2.52
HFM1-202ENST00000427444 MYCBP2O75592 4640 aa-0.66□□□□□ -2.52
HFM1-202ENST00000427444 SOGA1O94964 1423 aa-0.66□□□□□ -2.52
HFM1-202ENST00000427444 MYH1P12882 1939 aa-0.66□□□□□ -2.52
HFM1-202ENST00000427444 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.67□□□□□ -2.52
HFM1-202ENST00000427444 TRBV7-6A0A0J9YX20 115 aa-0.67□□□□□ -2.52
HFM1-202ENST00000427444 C9JAW5 83 aa-0.67□□□□□ -2.52
HFM1-202ENST00000427444 GID8Q9NWU2 228 aa-0.67□□□□□ -2.52
HFM1-202ENST00000427444 F5P12259 2224 aa-0.67□□□□□ -2.52
HFM1-202ENST00000427444 CADP27708 2225 aa-0.67□□□□□ -2.52
HFM1-202ENST00000427444 IGHV1-24A0A0C4DH33 117 aa-0.68□□□□□ -2.52
HFM1-202ENST00000427444 F2Z2F3 143 aa-0.68□□□□□ -2.52
HFM1-202ENST00000427444 SYNMO15061 1565 aa-0.68□□□□□ -2.52
HFM1-202ENST00000427444 SDC4P31431 198 aa-0.68□□□□□ -2.52
HFM1-202ENST00000427444 CKS2P33552 79 aa-0.68□□□□□ -2.52
HFM1-202ENST00000427444 LSM3P62310 102 aaKnown RBP-0.68□□□□□ -2.52
HFM1-202ENST00000427444 TMEM78Q5T7P6 136 aa-0.68□□□□□ -2.52
HFM1-202ENST00000427444 STX12Q86Y82 276 aa-0.68□□□□□ -2.52
HFM1-202ENST00000427444 NBEAL2Q6ZNJ1 2754 aa-0.68□□□□□ -2.52
HFM1-202ENST00000427444 FER1L6Q2WGJ9 1857 aa-0.69□□□□□ -2.52
HFM1-202ENST00000427444 TNS1Q9HBL0 1735 aaKnown RBP-0.69□□□□□ -2.52
HFM1-202ENST00000427444 UNC13BO14795 1591 aa-0.69□□□□□ -2.52
HFM1-202ENST00000427444 MT4P47944 62 aa-0.69□□□□□ -2.52
HFM1-202ENST00000427444 OTOSQ8NHW6 89 aa-0.69□□□□□ -2.52
HFM1-202ENST00000427444 TMEM141Q96I45 108 aa-0.69□□□□□ -2.52
HFM1-202ENST00000427444 CBLN4Q9NTU7 201 aa-0.69□□□□□ -2.52
HFM1-202ENST00000427444 COA4Q9NYJ1 87 aa-0.69□□□□□ -2.52
HFM1-202ENST00000427444 MED31Q9Y3C7 131 aa-0.69□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms