RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 FAM90A9PA6NNJ1 464 aa12.54□□□□□ -0.4
PKP4-205ENST00000426248 CGB3P0DN86 165 aa12.54□□□□□ -0.4
PKP4-205ENST00000426248 CGB7P0DN87 165 aa12.54□□□□□ -0.4
PKP4-205ENST00000426248 PPP1R27Q86WC6 154 aa12.54□□□□□ -0.4
PKP4-205ENST00000426248 LYRM7Q5U5X0 104 aa12.54□□□□□ -0.4
PKP4-205ENST00000426248 C11orf71Q6IPW1 123 aa12.54□□□□□ -0.4
PKP4-205ENST00000426248 RUSC1-AS1Q66K80 236 aa12.54□□□□□ -0.4
PKP4-205ENST00000426248 TMEM219Q86XT9 240 aa12.54□□□□□ -0.4
PKP4-205ENST00000426248 AGRNO00468 2067 aa12.53□□□□□ -0.4
PKP4-205ENST00000426248 RPL7P18124 248 aaKnown RBP12.53□□□□□ -0.4
PKP4-205ENST00000426248 PPDPFLQ8WWR9 84 aa12.53□□□□□ -0.4
PKP4-205ENST00000426248 M0R1W7 72 aa12.53□□□□□ -0.4
PKP4-205ENST00000426248 SAA4P35542 130 aa12.53□□□□□ -0.4
PKP4-205ENST00000426248 NPYP01303 97 aa12.53□□□□□ -0.4
PKP4-205ENST00000426248 C2orf83Q53S99 150 aa12.53□□□□□ -0.4
PKP4-205ENST00000426248 TMEM14BQ9NUH8 114 aa12.53□□□□□ -0.4
PKP4-205ENST00000426248 HELZ2Q9BYK8 2649 aaKnown RBP12.53□□□□□ -0.4
PKP4-205ENST00000426248 C1orf229Q6ZS94 237 aaPredicted RBP12.52□□□□□ -0.4
PKP4-205ENST00000426248 Q86TA4 180 aa12.52□□□□□ -0.4
PKP4-205ENST00000426248 GFRA4Q9GZZ7 299 aa12.52□□□□□ -0.4
PKP4-205ENST00000426248 RNASE2P10153 161 aaKnown RBP12.52□□□□□ -0.4
PKP4-205ENST00000426248 EMP1P54849 157 aa12.52□□□□□ -0.4
PKP4-205ENST00000426248 ID1P41134 155 aa12.52□□□□□ -0.41
PKP4-205ENST00000426248 CT83Q5H943 113 aa12.52□□□□□ -0.41
PKP4-205ENST00000426248 TPSG1Q9NRR2 321 aa12.52□□□□□ -0.41
PKP4-205ENST00000426248 BEX4Q9NWD9 120 aaPredicted RBP12.52□□□□□ -0.41
PKP4-205ENST00000426248 CCDC179H3BU77 68 aa12.52□□□□□ -0.41
PKP4-205ENST00000426248 TSPAN13O95857 204 aa12.52□□□□□ -0.41
PKP4-205ENST00000426248 ZNF833PQ6ZTB9 187 aa12.52□□□□□ -0.41
PKP4-205ENST00000426248 HIGD1AQ9Y241 93 aa12.52□□□□□ -0.41
PKP4-205ENST00000426248 B4DSR2 109 aa12.51□□□□□ -0.41
PKP4-205ENST00000426248 CR1LQ2VPA4 569 aa12.51□□□□□ -0.41
PKP4-205ENST00000426248 AAMDCQ9H7C9 122 aa12.51□□□□□ -0.41
PKP4-205ENST00000426248 NBR2O15453 112 aa12.51□□□□□ -0.41
PKP4-205ENST00000426248 PATE2Q6UY27 113 aa12.51□□□□□ -0.41
PKP4-205ENST00000426248 ITPR1Q14643 2758 aa12.5□□□□□ -0.41
PKP4-205ENST00000426248 TMEM158Q8WZ71 300 aa12.5□□□□□ -0.41
PKP4-205ENST00000426248 YAE1D1Q9NRH1 226 aa12.5□□□□□ -0.41
PKP4-205ENST00000426248 TMEM262E9PQX1 116 aa12.5□□□□□ -0.41
PKP4-205ENST00000426248 MRPL35Q9NZE8 188 aaKnown RBP12.5□□□□□ -0.41
PKP4-205ENST00000426248 MSMBP08118 114 aa12.5□□□□□ -0.41
PKP4-205ENST00000426248 MRPL51Q4U2R6 128 aaKnown RBP12.5□□□□□ -0.41
PKP4-205ENST00000426248 MEIG1Q5JSS6 88 aa12.5□□□□□ -0.41
PKP4-205ENST00000426248 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.5□□□□□ -0.41
PKP4-205ENST00000426248 EIF4EBP1Q13541 118 aaPredicted RBP12.49□□□□□ -0.41
PKP4-205ENST00000426248 ZNF562Q6V9R5 426 aa12.49□□□□□ -0.41
PKP4-205ENST00000426248 ZNF492Q9P255 531 aa12.49□□□□□ -0.41
PKP4-205ENST00000426248 ZNF688P0C7X2 276 aa12.49□□□□□ -0.41
PKP4-205ENST00000426248 IFITM1P13164 125 aa12.49□□□□□ -0.41
PKP4-205ENST00000426248 NPFFO15130 113 aa12.49□□□□□ -0.41
PKP4-205ENST00000426248 Q71RC1 249 aaPredicted RBP12.49□□□□□ -0.41
PKP4-205ENST00000426248 RITA1Q96K30 269 aa12.48□□□□□ -0.41
PKP4-205ENST00000426248 CDIP1Q9H305 208 aa12.48□□□□□ -0.41
PKP4-205ENST00000426248 M0R3E3 92 aa12.48□□□□□ -0.41
PKP4-205ENST00000426248 FAM104BQ5XKR9 115 aa12.48□□□□□ -0.41
PKP4-205ENST00000426248 Q6AWC8 147 aa12.48□□□□□ -0.41
PKP4-205ENST00000426248 Q96MF0 132 aa12.48□□□□□ -0.41
PKP4-205ENST00000426248 DUX5Q96PT3 197 aa12.48□□□□□ -0.41
PKP4-205ENST00000426248 FAM159AQ6UWV7 190 aa12.48□□□□□ -0.41
PKP4-205ENST00000426248 SIGLEC9Q9Y336 463 aa12.48□□□□□ -0.41
PKP4-205ENST00000426248 LRBAP50851 2863 aa12.48□□□□□ -0.41
PKP4-205ENST00000426248 HLA-DRB4P13762 266 aa12.47□□□□□ -0.41
PKP4-205ENST00000426248 DSCR9P59020 149 aa12.47□□□□□ -0.41
PKP4-205ENST00000426248 LINC00311Q8N616 119 aa12.47□□□□□ -0.41
PKP4-205ENST00000426248 C10orf105Q8TEF2 133 aa12.47□□□□□ -0.41
PKP4-205ENST00000426248 KLF12Q9Y4X4 402 aa12.47□□□□□ -0.41
PKP4-205ENST00000426248 HLA-DRB4X5D2U9 266 aa12.47□□□□□ -0.41
PKP4-205ENST00000426248 ZFP2Q6ZN57 461 aa12.47□□□□□ -0.41
PKP4-205ENST00000426248 TM2D2Q9BX73 214 aa12.47□□□□□ -0.41
PKP4-205ENST00000426248 PRSS22Q9GZN4 317 aa12.47□□□□□ -0.41
PKP4-205ENST00000426248 NFE4Q86UQ8 179 aa12.47□□□□□ -0.41
PKP4-205ENST00000426248 TMEM167AQ8TBQ9 72 aa12.47□□□□□ -0.41
PKP4-205ENST00000426248 C19orf71A6NCJ1 209 aa12.46□□□□□ -0.41
PKP4-205ENST00000426248 C9JAW5 83 aa12.46□□□□□ -0.41
PKP4-205ENST00000426248 LMO4P61968 165 aa12.46□□□□□ -0.41
PKP4-205ENST00000426248 IGFL4Q6B9Z1 124 aa12.46□□□□□ -0.41
PKP4-205ENST00000426248 MAPKAPK5-AS1Q8N8E1 139 aa12.46□□□□□ -0.41
PKP4-205ENST00000426248 ZNF815PA8K554 130 aa12.46□□□□□ -0.42
PKP4-205ENST00000426248 HIGD1BQ9P298 99 aa12.46□□□□□ -0.42
PKP4-205ENST00000426248 FCN3O75636 299 aa12.45□□□□□ -0.42
PKP4-205ENST00000426248 SLC25A16P16260 332 aa12.45□□□□□ -0.42
PKP4-205ENST00000426248 ATRQ13535 2644 aa12.45□□□□□ -0.42
PKP4-205ENST00000426248 C8orf49Q96NF6 230 aa12.45□□□□□ -0.42
PKP4-205ENST00000426248 ATP5LO75964 103 aa12.45□□□□□ -0.42
PKP4-205ENST00000426248 UBE2E1P51965 193 aa12.45□□□□□ -0.42
PKP4-205ENST00000426248 A0A096LNJ9 63 aa12.45□□□□□ -0.42
PKP4-205ENST00000426248 H3BUX3 64 aa12.45□□□□□ -0.42
PKP4-205ENST00000426248 MGPP08493 103 aa12.45□□□□□ -0.42
PKP4-205ENST00000426248 VCX2Q9H322 139 aa12.45□□□□□ -0.42
PKP4-205ENST00000426248 IGLV1-47P01700 117 aa12.44□□□□□ -0.42
PKP4-205ENST00000426248 KRTAP10-9P60411 292 aa12.44□□□□□ -0.42
PKP4-205ENST00000426248 RAX2Q96IS3 184 aa12.44□□□□□ -0.42
PKP4-205ENST00000426248 OTORQ9NRC9 128 aa12.44□□□□□ -0.42
PKP4-205ENST00000426248 NDUFV3P56181 108 aaKnown RBP12.44□□□□□ -0.42
PKP4-205ENST00000426248 MINOS1Q5TGZ0 78 aa12.44□□□□□ -0.42
PKP4-205ENST00000426248 TEN1Q86WV5 123 aa12.44□□□□□ -0.42
PKP4-205ENST00000426248 PIP4P2Q8N4L2 257 aa12.44□□□□□ -0.42
PKP4-205ENST00000426248 MINOS1-NBL1R4GNA1 71 aa12.44□□□□□ -0.42
PKP4-205ENST00000426248 FABP5P3A8MUU1 101 aa12.44□□□□□ -0.42
PKP4-205ENST00000426248 ODF1Q14990 250 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms