RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 TWIST1Q15672 202 aa19.78■□□□□ 0.76
LDB1-202ENST00000425280 DYNLRB2Q8TF09 96 aa19.78■□□□□ 0.76
LDB1-202ENST00000425280 NAGKQ9UJ70 344 aa19.77■□□□□ 0.76
LDB1-202ENST00000425280 DEFB114Q30KQ6 69 aa19.77■□□□□ 0.75
LDB1-202ENST00000425280 EBLN2Q6P2I7 272 aa19.77■□□□□ 0.75
LDB1-202ENST00000425280 TRAV2A0A0B4J234 112 aa19.76■□□□□ 0.75
LDB1-202ENST00000425280 KCNS1Q96KK3 526 aa19.76■□□□□ 0.75
LDB1-202ENST00000425280 ODF3Q96PU9 254 aa19.76■□□□□ 0.75
LDB1-202ENST00000425280 MSRB1Q9NZV6 116 aa19.75■□□□□ 0.75
LDB1-202ENST00000425280 TCF21O43680 179 aa19.74■□□□□ 0.75
LDB1-202ENST00000425280 FAM104BQ5XKR9 115 aa19.74■□□□□ 0.75
LDB1-202ENST00000425280 FOXI2Q6ZQN5 318 aa19.74■□□□□ 0.75
LDB1-202ENST00000425280 IGKV3-20P01619 116 aa19.73■□□□□ 0.75
LDB1-202ENST00000425280 LEPP41159 167 aa19.73■□□□□ 0.75
LDB1-202ENST00000425280 ANXA2RQ3ZCQ2 193 aa19.73■□□□□ 0.75
LDB1-202ENST00000425280 AMN1Q8IY45 258 aa19.73■□□□□ 0.75
LDB1-202ENST00000425280 OR5AL1P0C617 328 aa19.72■□□□□ 0.75
LDB1-202ENST00000425280 CD300EQ496F6 205 aaPredicted RBP19.72■□□□□ 0.75
LDB1-202ENST00000425280 NIT2Q9NQR4 276 aa19.72■□□□□ 0.75
LDB1-202ENST00000425280 ADARB2-AS1A8MUL3 147 aa19.72■□□□□ 0.75
LDB1-202ENST00000425280 SNAI2O43623 268 aa19.72■□□□□ 0.75
LDB1-202ENST00000425280 DUSP14O95147 198 aaKnown RBP19.72■□□□□ 0.75
LDB1-202ENST00000425280 OR10AG1Q8NH19 301 aa19.72■□□□□ 0.75
LDB1-202ENST00000425280 SAMD10Q9BYL1 202 aa19.72■□□□□ 0.75
LDB1-202ENST00000425280 SETD2Q9BYW2 2564 aaPredicted RBP19.71■□□□□ 0.75
LDB1-202ENST00000425280 TMEM191AQ9H0A3 160 aa19.71■□□□□ 0.75
LDB1-202ENST00000425280 HIVEP1P15822 2718 aa19.71■□□□□ 0.75
LDB1-202ENST00000425280 H3BVH4 76 aa19.71■□□□□ 0.75
LDB1-202ENST00000425280 DEFB131AP59861 70 aa19.71■□□□□ 0.75
LDB1-202ENST00000425280 CDPF1Q6NVV7 123 aa19.71■□□□□ 0.75
LDB1-202ENST00000425280 SORL1Q92673 2214 aa19.7■□□□□ 0.74
LDB1-202ENST00000425280 JOSD1Q15040 202 aaPredicted RBP19.7■□□□□ 0.74
LDB1-202ENST00000425280 URB1-AS1Q96HZ7 61 aa19.69■□□□□ 0.74
LDB1-202ENST00000425280 AGRNO00468 2067 aa19.69■□□□□ 0.74
LDB1-202ENST00000425280 ZNF324O75467 553 aaPredicted RBP19.69■□□□□ 0.74
LDB1-202ENST00000425280 MRPL51Q4U2R6 128 aaKnown RBP19.69■□□□□ 0.74
LDB1-202ENST00000425280 NIT1Q86X76 327 aa19.69■□□□□ 0.74
LDB1-202ENST00000425280 U3KQK5 164 aa19.69■□□□□ 0.74
LDB1-202ENST00000425280 NSD1Q96L73 2696 aaPredicted RBP19.69■□□□□ 0.74
LDB1-202ENST00000425280 SETXQ7Z333 2677 aaKnown RBP19.68■□□□□ 0.74
LDB1-202ENST00000425280 C7orf71A4D174 169 aa19.68■□□□□ 0.74
LDB1-202ENST00000425280 KNCNA6PVL3 124 aa19.68■□□□□ 0.74
LDB1-202ENST00000425280 DMRTA1Q5VZB9 504 aa19.68■□□□□ 0.74
LDB1-202ENST00000425280 SIGLEC8Q9NYZ4 499 aa19.68■□□□□ 0.74
LDB1-202ENST00000425280 TRAV12-3A0A0B4J271 114 aa19.67■□□□□ 0.74
LDB1-202ENST00000425280 M0R2Z0 102 aa19.67■□□□□ 0.74
LDB1-202ENST00000425280 PMCHP20382 165 aa19.67■□□□□ 0.74
LDB1-202ENST00000425280 ASIPP42127 132 aa19.67■□□□□ 0.74
LDB1-202ENST00000425280 AMTP48728 403 aa19.67■□□□□ 0.74
LDB1-202ENST00000425280 KRTAP10-3P60369 221 aa19.67■□□□□ 0.74
LDB1-202ENST00000425280 RNASEKQ6P5S7 137 aaKnown RBP19.67■□□□□ 0.74
LDB1-202ENST00000425280 AMTNQ6UX39 209 aa19.67■□□□□ 0.74
LDB1-202ENST00000425280 FN1P02751 2386 aaKnown RBP19.67■□□□□ 0.74
LDB1-202ENST00000425280 IGHV4-4A0A075B6R2 117 aa19.67■□□□□ 0.74
LDB1-202ENST00000425280 NSUN5P1Q3KNT7 163 aa19.67■□□□□ 0.74
LDB1-202ENST00000425280 Q6ZWC4 215 aa19.67■□□□□ 0.74
LDB1-202ENST00000425280 SPAG8Q99932 426 aaPredicted RBP19.67■□□□□ 0.74
LDB1-202ENST00000425280 D6R8Y8 96 aa19.66■□□□□ 0.74
LDB1-202ENST00000425280 GNRH2O43555 120 aa19.66■□□□□ 0.74
LDB1-202ENST00000425280 CRLF1O75462 422 aa19.66■□□□□ 0.74
LDB1-202ENST00000425280 CACNG7P62955 275 aa19.66■□□□□ 0.74
LDB1-202ENST00000425280 FAM19A2Q8N3H0 131 aa19.66■□□□□ 0.74
LDB1-202ENST00000425280 TIMM8BQ9Y5J9 83 aaPredicted RBP19.66■□□□□ 0.74
LDB1-202ENST00000425280 TRAV12-2A0A075B6T6 113 aa19.66■□□□□ 0.74
LDB1-202ENST00000425280 TRAV25A0A0B4J276 109 aa19.66■□□□□ 0.74
LDB1-202ENST00000425280 TSPOP30536 169 aa19.66■□□□□ 0.74
LDB1-202ENST00000425280 CDKN1BP46527 198 aa19.66■□□□□ 0.74
LDB1-202ENST00000425280 SPINK13Q1W4C9 94 aa19.66■□□□□ 0.74
LDB1-202ENST00000425280 RNF185Q96GF1 192 aa19.66■□□□□ 0.74
LDB1-202ENST00000425280 MAP6D1Q9H9H5 199 aa19.66■□□□□ 0.74
LDB1-202ENST00000425280 ZNF256Q9Y2P7 627 aaPredicted RBP19.66■□□□□ 0.74
LDB1-202ENST00000425280 OR4C46A6NHA9 309 aa19.65■□□□□ 0.74
LDB1-202ENST00000425280 DNLZQ5SXM8 178 aa19.65■□□□□ 0.74
LDB1-202ENST00000425280 SPANXN1Q5VSR9 72 aa19.65■□□□□ 0.74
LDB1-202ENST00000425280 WNK1Q9H4A3 2382 aa19.65■□□□□ 0.74
LDB1-202ENST00000425280 HLA-DRB4P13762 266 aa19.64■□□□□ 0.74
LDB1-202ENST00000425280 S100A4P26447 101 aaKnown RBP19.64■□□□□ 0.74
LDB1-202ENST00000425280 ZNF124Q15973 351 aa19.64■□□□□ 0.74
LDB1-202ENST00000425280 HLA-DRB4X5D2U9 266 aa19.64■□□□□ 0.74
LDB1-202ENST00000425280 HSBP1O75506 76 aa19.64■□□□□ 0.73
LDB1-202ENST00000425280 RAB4AP20338 218 aa19.64■□□□□ 0.73
LDB1-202ENST00000425280 ORMDL3Q8N138 153 aa19.64■□□□□ 0.73
LDB1-202ENST00000425280 A8MTW9 85 aa19.63■□□□□ 0.73
LDB1-202ENST00000425280 MED14OSP0DP75 135 aa19.63■□□□□ 0.73
LDB1-202ENST00000425280 FAM159AQ6UWV7 190 aa19.63■□□□□ 0.73
LDB1-202ENST00000425280 H3BMM0 161 aa19.63■□□□□ 0.73
LDB1-202ENST00000425280 RNASE3P12724 160 aaKnown RBP19.63■□□□□ 0.73
LDB1-202ENST00000425280 PRELID3AQ96N28 172 aa19.63■□□□□ 0.73
LDB1-202ENST00000425280 SCRT2Q9NQ03 307 aa19.63■□□□□ 0.73
LDB1-202ENST00000425280 PCP4L1A6NKN8 68 aa19.62■□□□□ 0.73
LDB1-202ENST00000425280 CHCHD1Q96BP2 118 aaKnown RBP19.62■□□□□ 0.73
LDB1-202ENST00000425280 SPRY2O43597 315 aa19.61■□□□□ 0.73
LDB1-202ENST00000425280 EVI2AP22794 236 aa19.61■□□□□ 0.73
LDB1-202ENST00000425280 SMKR1H3BMG3 65 aa19.61■□□□□ 0.73
LDB1-202ENST00000425280 LINC00614P0C842 121 aa19.61■□□□□ 0.73
LDB1-202ENST00000425280 CKS2P33552 79 aa19.61■□□□□ 0.73
LDB1-202ENST00000425280 NDUFA11Q86Y39 141 aa19.6■□□□□ 0.73
LDB1-202ENST00000425280 TDRG1Q3Y452 100 aa19.6■□□□□ 0.73
LDB1-202ENST00000425280 NCR2O95944 276 aa19.59■□□□□ 0.73
LDB1-202ENST00000425280 SMIM15Q7Z3B0 74 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 192.5 ms