RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 EML6Q6ZMW3 1958 aa2.06□□□□□ -2.08
PMS1-209ENST00000424059 ANKRD36A6QL64 1941 aa2.06□□□□□ -2.08
PMS1-209ENST00000424059 ERCC6L2Q5T890 1561 aa2.06□□□□□ -2.08
PMS1-209ENST00000424059 IGHV1-69DA0A0B4J2H0 117 aa2.06□□□□□ -2.08
PMS1-209ENST00000424059 TRBV5-4A0A0C4DH59 114 aa2.06□□□□□ -2.08
PMS1-209ENST00000424059 E7EQL1 145 aa2.06□□□□□ -2.08
PMS1-209ENST00000424059 SLC25A20O43772 301 aa2.06□□□□□ -2.08
PMS1-209ENST00000424059 PEBP1P30086 187 aaKnown RBP2.06□□□□□ -2.08
PMS1-209ENST00000424059 NCBP2P52298 156 aaKnown RBP eCLIP2.06□□□□□ -2.081e-7■□□□□ 11
PMS1-209ENST00000424059 RPL30P62888 115 aaKnown RBP2.06□□□□□ -2.08
PMS1-209ENST00000424059 RBM3P98179 157 aaKnown RBP2.06□□□□□ -2.08
PMS1-209ENST00000424059 RPL18Q07020 188 aaKnown RBP2.06□□□□□ -2.08
PMS1-209ENST00000424059 RBMY1FQ15415 496 aaKnown RBP2.06□□□□□ -2.08
PMS1-209ENST00000424059 GUSBP11Q6P575 273 aa2.06□□□□□ -2.08
PMS1-209ENST00000424059 CHCHD1Q96BP2 118 aaKnown RBP2.06□□□□□ -2.08
PMS1-209ENST00000424059 ZNF702PQ9H963 129 aa2.06□□□□□ -2.08
PMS1-209ENST00000424059 GNG13Q9P2W3 67 aa2.06□□□□□ -2.08
PMS1-209ENST00000424059 IGKV1D-17A0A075B6S4 117 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 TRBV7-1A0A0A6YYK4 115 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 IGHV1OR15-9A0A0B4J2B8 117 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 CDK2AP2O75956 126 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 IL4P05112 153 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 LINC01547P58512 204 aaPredicted RBP2.05□□□□□ -2.08
PMS1-209ENST00000424059 RPS21P63220 83 aaKnown RBP2.05□□□□□ -2.08
PMS1-209ENST00000424059 CIRBPQ14011 172 aaKnown RBP2.05□□□□□ -2.08
PMS1-209ENST00000424059 Q1T7F1 81 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 ATP11AUNQ6ZP68 121 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 LINC00173Q6ZV60 143 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 FAM223AQ8IWN6 122 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 ITLN1Q8WWA0 313 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 ITLN2Q8WWU7 325 aaPredicted RBP2.05□□□□□ -2.08
PMS1-209ENST00000424059 SLC25A22Q9H936 323 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 OBSL1O75147 1896 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 KMT2BQ9UMN6 2715 aaPredicted RBP2.05□□□□□ -2.08
PMS1-209ENST00000424059 DYSFO75923 2080 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 ANKRD12Q6UB98 2062 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 TMSB15BA0A087X1C1 80 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.05□□□□□ -2.08
PMS1-209ENST00000424059 CEBPZOSA8MTT3 80 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 C9JCJ5 164 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 H3BMM0 161 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 BCE1O60756 84 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 LEPROTL1O95214 131 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 IGKV1-16P04430 117 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 FUSP35637 526 aaKnown RBP eCLIP2.05□□□□□ -2.08
PMS1-209ENST00000424059 XCL1P47992 114 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 RHOHQ15669 191 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 KISS1Q15726 138 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 C11orf71Q6IPW1 123 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 PATE2Q6UY27 113 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 PDPNQ86YL7 162 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 SPTSSAQ969W0 71 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 UBE2WQ96B02 151 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 NPCDR1Q9BY65 106 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 PROK2Q9HC23 129 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 KLK13Q9UKR3 277 aa2.05□□□□□ -2.08
PMS1-209ENST00000424059 DLG5Q8TDM6 1919 aa2.04□□□□□ -2.08
PMS1-209ENST00000424059 CD163L1Q9NR16 1453 aa2.04□□□□□ -2.08
PMS1-209ENST00000424059 NHSL1Q5SYE7 1610 aa2.04□□□□□ -2.08
PMS1-209ENST00000424059 THSD7BQ9C0I4 1608 aa2.04□□□□□ -2.08
PMS1-209ENST00000424059 TRBV7-3A0A075B6L6 115 aa2.04□□□□□ -2.08
PMS1-209ENST00000424059 J3QRE1 110 aa2.04□□□□□ -2.08
PMS1-209ENST00000424059 K7EQD1 137 aa2.04□□□□□ -2.08
PMS1-209ENST00000424059 ZNHIT1O43257 154 aa2.04□□□□□ -2.08
PMS1-209ENST00000424059 PPYP01298 95 aa2.04□□□□□ -2.08
PMS1-209ENST00000424059 PRM2P04554 102 aa2.04□□□□□ -2.08
PMS1-209ENST00000424059 CKS2P33552 79 aa2.04□□□□□ -2.08
PMS1-209ENST00000424059 UBE2AP49459 152 aa2.04□□□□□ -2.08
PMS1-209ENST00000424059 REG3AQ06141 175 aa2.04□□□□□ -2.08
PMS1-209ENST00000424059 IFI27L1Q96BM0 104 aa2.04□□□□□ -2.08
PMS1-209ENST00000424059 TOGARAM1Q9Y4F4 1720 aa2.04□□□□□ -2.08
PMS1-209ENST00000424059 POLEQ07864 2286 aa2.04□□□□□ -2.08
PMS1-209ENST00000424059 DLEC1Q9Y238 1755 aa2.04□□□□□ -2.08
PMS1-209ENST00000424059 DOCK9Q9BZ29 2069 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 IGLV3-9A0A075B6K5 115 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 TRAV13-2A0A0B4J235 113 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 A0A0B4J2C4 111 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 TRBV10-2A0A0K0K1G8 114 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 FAM223BA6NKX1 122 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 COX7A2P2O60397 106 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 WISP3O95389 354 aaPredicted RBP2.03□□□□□ -2.08
PMS1-209ENST00000424059 IGLV2-8P01709 118 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 IGHV4-39P01824 125 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 UBE2D1P51668 147 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 GNB1P62873 340 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 ZNF117Q03924 483 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 C1orf100Q5SVJ3 147 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 GDF5OSQ5U4N7 250 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 NDUFA11Q86Y39 141 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 ODF3L1Q8IXM7 274 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 NUP37Q8NFH4 326 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 ZNF714Q96N38 554 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 NABP2Q9BQ15 211 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 SLC25A2Q9BXI2 301 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 C11orf1Q9H5F2 150 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 TAS2R4Q9NYW5 299 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 MRPL35Q9NZE8 188 aaKnown RBP2.03□□□□□ -2.08
PMS1-209ENST00000424059 SIP14410 1827 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 NRXN3Q9Y4C0 1643 aa2.03□□□□□ -2.08
PMS1-209ENST00000424059 NRAPQ86VF7 1730 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms