RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 MAP1LC3CQ9BXW4 147 aa9.05□□□□□ -0.96
PTPRN-204ENST00000423636 MUC4Q99102 2169 aa9.05□□□□□ -0.96
PTPRN-204ENST00000423636 NPSP0C0P6 89 aa9.05□□□□□ -0.96
PTPRN-204ENST00000423636 S100A7AQ86SG5 101 aa9.05□□□□□ -0.96
PTPRN-204ENST00000423636 Q96MF0 132 aa9.05□□□□□ -0.96
PTPRN-204ENST00000423636 DKK2Q9UBU2 259 aa9.05□□□□□ -0.96
PTPRN-204ENST00000423636 TRAV12-3A0A0B4J271 114 aa9.05□□□□□ -0.96
PTPRN-204ENST00000423636 BMI1P35226 326 aa9.05□□□□□ -0.96
PTPRN-204ENST00000423636 RNF151Q2KHN1 245 aa9.05□□□□□ -0.96
PTPRN-204ENST00000423636 SMIM12Q96EX1 92 aa9.05□□□□□ -0.96
PTPRN-204ENST00000423636 C20orf144Q9BQM9 153 aa9.05□□□□□ -0.96
PTPRN-204ENST00000423636 TRAV9-2A0A087WT02 112 aa9.04□□□□□ -0.96
PTPRN-204ENST00000423636 IGHG2P01859 326 aa9.04□□□□□ -0.96
PTPRN-204ENST00000423636 MPV17L2Q567V2 206 aa9.04□□□□□ -0.96
PTPRN-204ENST00000423636 C16orf54Q6UWD8 224 aa9.04□□□□□ -0.96
PTPRN-204ENST00000423636 ZNF48Q96MX3 618 aaPredicted RBP9.04□□□□□ -0.96
PTPRN-204ENST00000423636 TSPOP30536 169 aa9.04□□□□□ -0.96
PTPRN-204ENST00000423636 PSMG4Q5JS54 123 aa9.04□□□□□ -0.96
PTPRN-204ENST00000423636 C2orf88Q9BSF0 95 aa9.04□□□□□ -0.96
PTPRN-204ENST00000423636 FBLL1A6NHQ2 334 aaKnown RBP9.03□□□□□ -0.96
PTPRN-204ENST00000423636 KLK9Q9UKQ9 250 aa9.03□□□□□ -0.96
PTPRN-204ENST00000423636 A0A087WWL8 130 aa9.03□□□□□ -0.96
PTPRN-204ENST00000423636 LEPP41159 167 aa9.03□□□□□ -0.96
PTPRN-204ENST00000423636 ANXA2RQ3ZCQ2 193 aa9.03□□□□□ -0.96
PTPRN-204ENST00000423636 Q5PR19 223 aa9.03□□□□□ -0.96
PTPRN-204ENST00000423636 FAM74A4Q5TZK3 123 aa9.03□□□□□ -0.96
PTPRN-204ENST00000423636 RPL39LQ96EH5 51 aaKnown RBP9.03□□□□□ -0.96
PTPRN-204ENST00000423636 RNF185Q96GF1 192 aa9.03□□□□□ -0.96
PTPRN-204ENST00000423636 UQCR10Q9UDW1 63 aa9.03□□□□□ -0.96
PTPRN-204ENST00000423636 LAMTOR2Q9Y2Q5 125 aa9.03□□□□□ -0.96
PTPRN-204ENST00000423636 NMUP48645 174 aa9.03□□□□□ -0.96
PTPRN-204ENST00000423636 MEGF9Q9H1U4 602 aa9.03□□□□□ -0.96
PTPRN-204ENST00000423636 CBY3A6NI87 242 aa9.02□□□□□ -0.97
PTPRN-204ENST00000423636 DNLZQ5SXM8 178 aa9.02□□□□□ -0.97
PTPRN-204ENST00000423636 WFDC11Q8NEX6 87 aa9.02□□□□□ -0.97
PTPRN-204ENST00000423636 ZNF747Q9BV97 191 aa9.02□□□□□ -0.97
PTPRN-204ENST00000423636 TNFRSF6BO95407 300 aa9.02□□□□□ -0.97
PTPRN-204ENST00000423636 NUDT3O95989 172 aa9.02□□□□□ -0.97
PTPRN-204ENST00000423636 ANKRD39Q53RE8 183 aa9.02□□□□□ -0.97
PTPRN-204ENST00000423636 TEP1Q99973 2627 aaKnown RBP9.02□□□□□ -0.97
PTPRN-204ENST00000423636 PRSS1P07477 247 aa9.02□□□□□ -0.97
PTPRN-204ENST00000423636 IGLC6P0CF74 106 aa9.02□□□□□ -0.97
PTPRN-204ENST00000423636 EMP1P54849 157 aa9.02□□□□□ -0.97
PTPRN-204ENST00000423636 SLURP1P55000 103 aa9.02□□□□□ -0.97
PTPRN-204ENST00000423636 OR10J6PQ8NGY7 276 aa9.02□□□□□ -0.97
PTPRN-204ENST00000423636 IGHV3-73A0A0B4J1V6 119 aa9.01□□□□□ -0.97
PTPRN-204ENST00000423636 TCF21O43680 179 aa9.01□□□□□ -0.97
PTPRN-204ENST00000423636 PCP4P48539 62 aa9.01□□□□□ -0.97
PTPRN-204ENST00000423636 ZC2HC1BQ5TFG8 222 aa9.01□□□□□ -0.97
PTPRN-204ENST00000423636 CR1P17927 2039 aa9.01□□□□□ -0.97
PTPRN-204ENST00000423636 LINC01356Q8N9X3 169 aa9.01□□□□□ -0.97
PTPRN-204ENST00000423636 C7orf71A4D174 169 aa9□□□□□ -0.97
PTPRN-204ENST00000423636 SPINK13Q1W4C9 94 aa9□□□□□ -0.97
PTPRN-204ENST00000423636 SLC50A1Q9BRV3 221 aa9□□□□□ -0.97
PTPRN-204ENST00000423636 PEF1Q9UBV8 284 aaKnown RBP9□□□□□ -0.97
PTPRN-204ENST00000423636 IGHV4OR15-8A0A075B7B6 117 aa9□□□□□ -0.97
PTPRN-204ENST00000423636 A0A087WW49 117 aa9□□□□□ -0.97
PTPRN-204ENST00000423636 IGHV7-4-1A0A0J9YVY3 117 aa9□□□□□ -0.97
PTPRN-204ENST00000423636 FAM231BA6NCW3 169 aa9□□□□□ -0.97
PTPRN-204ENST00000423636 TMEM158Q8WZ71 300 aa9□□□□□ -0.97
PTPRN-204ENST00000423636 CHCHD1Q96BP2 118 aaKnown RBP9□□□□□ -0.97
PTPRN-204ENST00000423636 TMEM208Q9BTX3 173 aa9□□□□□ -0.97
PTPRN-204ENST00000423636 PPP1R14DQ9NXH3 145 aa9□□□□□ -0.97
PTPRN-204ENST00000423636 PDZD2O15018 2839 aa9□□□□□ -0.97
PTPRN-204ENST00000423636 FAM223BA6NKX1 122 aa9□□□□□ -0.97
PTPRN-204ENST00000423636 HSBP1L1C9JCN9 74 aa9□□□□□ -0.97
PTPRN-204ENST00000423636 ATRQ13535 2644 aa9□□□□□ -0.97
PTPRN-204ENST00000423636 C19orf54Q5BKX5 351 aa9□□□□□ -0.97
PTPRN-204ENST00000423636 FAM223AQ8IWN6 122 aa9□□□□□ -0.97
PTPRN-204ENST00000423636 K7EP13 123 aa8.99□□□□□ -0.97
PTPRN-204ENST00000423636 PCP2Q8IVA1 136 aa8.99□□□□□ -0.97
PTPRN-204ENST00000423636 TMEM191AQ9H0A3 160 aa8.99□□□□□ -0.97
PTPRN-204ENST00000423636 PHLDA3Q9Y5J5 127 aa8.99□□□□□ -0.97
PTPRN-204ENST00000423636 F5H697 171 aa8.99□□□□□ -0.97
PTPRN-204ENST00000423636 ZFAND2AQ8N6M9 145 aa8.99□□□□□ -0.97
PTPRN-204ENST00000423636 DAZ1Q9NQZ3 744 aaKnown RBP8.99□□□□□ -0.97
PTPRN-204ENST00000423636 GOLT1BQ9Y3E0 138 aa8.99□□□□□ -0.97
PTPRN-204ENST00000423636 KNCNA6PVL3 124 aa8.98□□□□□ -0.97
PTPRN-204ENST00000423636 NDUFS8O00217 210 aa8.98□□□□□ -0.97
PTPRN-204ENST00000423636 OR2K2Q8NGT1 345 aa8.98□□□□□ -0.97
PTPRN-204ENST00000423636 TENM1Q9UKZ4 2725 aa8.98□□□□□ -0.97
PTPRN-204ENST00000423636 KLHDC1Q8N7A1 406 aa8.98□□□□□ -0.97
PTPRN-204ENST00000423636 HSPB8Q9UJY1 196 aa8.98□□□□□ -0.97
PTPRN-204ENST00000423636 NDUFA4O00483 81 aa8.98□□□□□ -0.97
PTPRN-204ENST00000423636 CD7P09564 240 aa8.98□□□□□ -0.97
PTPRN-204ENST00000423636 TMEM190Q8WZ59 177 aa8.98□□□□□ -0.97
PTPRN-204ENST00000423636 FOXC2Q99958 501 aa8.98□□□□□ -0.97
PTPRN-204ENST00000423636 TMEM160Q9NX00 188 aa8.98□□□□□ -0.97
PTPRN-204ENST00000423636 U3KQE9 123 aa8.98□□□□□ -0.97
PTPRN-204ENST00000423636 C20orf202A1L168 122 aa8.97□□□□□ -0.97
PTPRN-204ENST00000423636 IGHV4-31P0DP07 118 aa8.97□□□□□ -0.97
PTPRN-204ENST00000423636 S100A7P31151 101 aa8.97□□□□□ -0.97
PTPRN-204ENST00000423636 GTSCR1Q86UQ5 136 aa8.97□□□□□ -0.97
PTPRN-204ENST00000423636 IFI27L1Q96BM0 104 aa8.97□□□□□ -0.97
PTPRN-204ENST00000423636 MS4A6AQ9H2W1 248 aa8.97□□□□□ -0.97
PTPRN-204ENST00000423636 MAP1LC3AQ9H492 121 aa8.97□□□□□ -0.97
PTPRN-204ENST00000423636 TRBV6-1A0A0K0K1D8 114 aa8.97□□□□□ -0.97
PTPRN-204ENST00000423636 RAB37Q96AX2 223 aa8.97□□□□□ -0.97
PTPRN-204ENST00000423636 MDFICQ9P1T7 246 aa8.97□□□□□ -0.97
PTPRN-204ENST00000423636 SMPXQ9UHP9 88 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms