RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 KLF12Q9Y4X4 402 aa12.84□□□□□ -0.35
ECHDC3-202ENST00000420401 TRGV1A0A0A0MS02 117 aa12.83□□□□□ -0.36
ECHDC3-202ENST00000420401 SPINK4O60575 86 aa12.83□□□□□ -0.36
ECHDC3-202ENST00000420401 SULT1A2P50226 295 aa12.83□□□□□ -0.36
ECHDC3-202ENST00000420401 TMEM183BQ1AE95 376 aa12.83□□□□□ -0.36
ECHDC3-202ENST00000420401 TMEM88Q6PEY1 159 aa12.83□□□□□ -0.36
ECHDC3-202ENST00000420401 Q6ZTI0 123 aa12.83□□□□□ -0.36
ECHDC3-202ENST00000420401 TMEM183AQ8IXX5 376 aa12.83□□□□□ -0.36
ECHDC3-202ENST00000420401 KCNS1Q96KK3 526 aa12.83□□□□□ -0.36
ECHDC3-202ENST00000420401 C8orf49Q96NF6 230 aa12.83□□□□□ -0.36
ECHDC3-202ENST00000420401 RYR1P21817 5038 aa12.82□□□□□ -0.36
ECHDC3-202ENST00000420401 TRGV2A0A075B6R0 118 aa12.82□□□□□ -0.36
ECHDC3-202ENST00000420401 TRAV1-1A0A0B4J248 108 aa12.82□□□□□ -0.36
ECHDC3-202ENST00000420401 GCGP01275 180 aa12.82□□□□□ -0.36
ECHDC3-202ENST00000420401 UBE2G1P62253 170 aa12.82□□□□□ -0.36
ECHDC3-202ENST00000420401 LGALS9BQ3B8N2 356 aa12.82□□□□□ -0.36
ECHDC3-202ENST00000420401 FMC1Q96HJ9 113 aa12.82□□□□□ -0.36
ECHDC3-202ENST00000420401 KIAA1109Q2LD37 5005 aa12.81□□□□□ -0.36
ECHDC3-202ENST00000420401 PFN1P07737 140 aaKnown RBP12.81□□□□□ -0.36
ECHDC3-202ENST00000420401 P0DMU3 169 aa12.81□□□□□ -0.36
ECHDC3-202ENST00000420401 FAM231AP0DMU4 169 aa12.81□□□□□ -0.36
ECHDC3-202ENST00000420401 FAM231CP0DMU5 169 aa12.81□□□□□ -0.36
ECHDC3-202ENST00000420401 C15orf53Q8NAA6 179 aa12.81□□□□□ -0.36
ECHDC3-202ENST00000420401 C18orf15Q96N68 181 aa12.81□□□□□ -0.36
ECHDC3-202ENST00000420401 SPXQ9BT56 116 aa12.81□□□□□ -0.36
ECHDC3-202ENST00000420401 SDF2L1Q9HCN8 221 aa12.81□□□□□ -0.36
ECHDC3-202ENST00000420401 MDFICQ9P1T7 246 aa12.81□□□□□ -0.36
ECHDC3-202ENST00000420401 ZNF80P51504 273 aaPredicted RBP12.8□□□□□ -0.36
ECHDC3-202ENST00000420401 OR5I1Q13606 314 aa12.8□□□□□ -0.36
ECHDC3-202ENST00000420401 Q86TA4 180 aa12.8□□□□□ -0.36
ECHDC3-202ENST00000420401 MANBALQ9NQG1 85 aa12.8□□□□□ -0.36
ECHDC3-202ENST00000420401 ZFP30Q9Y2G7 519 aa12.8□□□□□ -0.36
ECHDC3-202ENST00000420401 VPS13DQ5THJ4 4388 aa12.79□□□□□ -0.36
ECHDC3-202ENST00000420401 TRBV6-1A0A0K0K1D8 114 aa12.79□□□□□ -0.36
ECHDC3-202ENST00000420401 GNRH2O43555 120 aa12.79□□□□□ -0.36
ECHDC3-202ENST00000420401 S100A9P06702 114 aaKnown RBP12.79□□□□□ -0.36
ECHDC3-202ENST00000420401 AKR1C3P42330 323 aa12.79□□□□□ -0.36
ECHDC3-202ENST00000420401 IGHV3-16A0A0C4DH30 117 aa12.78□□□□□ -0.36
ECHDC3-202ENST00000420401 TYMSP04818 313 aa12.78□□□□□ -0.36
ECHDC3-202ENST00000420401 CCL20P78556 96 aa12.78□□□□□ -0.36
ECHDC3-202ENST00000420401 MRPL16Q9NX20 251 aaKnown RBP12.78□□□□□ -0.36
ECHDC3-202ENST00000420401 GNG13Q9P2W3 67 aa12.78□□□□□ -0.36
ECHDC3-202ENST00000420401 FABP5P3A8MUU1 101 aa12.77□□□□□ -0.37
ECHDC3-202ENST00000420401 HOXA5P20719 270 aa12.76□□□□□ -0.37
ECHDC3-202ENST00000420401 COX8CQ7Z4L0 72 aa12.76□□□□□ -0.37
ECHDC3-202ENST00000420401 TXNDC17Q9BRA2 123 aa12.76□□□□□ -0.37
ECHDC3-202ENST00000420401 TRAV26-1A0A087WT03 109 aa12.75□□□□□ -0.37
ECHDC3-202ENST00000420401 M0R2P5 195 aa12.75□□□□□ -0.37
ECHDC3-202ENST00000420401 NUDT3O95989 172 aa12.75□□□□□ -0.37
ECHDC3-202ENST00000420401 LTAP01374 205 aa12.75□□□□□ -0.37
ECHDC3-202ENST00000420401 IFNA1P01562 189 aa12.75□□□□□ -0.37
ECHDC3-202ENST00000420401 NKX2-5P52952 324 aaPredicted RBP12.75□□□□□ -0.37
ECHDC3-202ENST00000420401 UBE2DNLQ8IWF7 75 aa12.75□□□□□ -0.37
ECHDC3-202ENST00000420401 POM121L12Q8N7R1 296 aa12.75□□□□□ -0.37
ECHDC3-202ENST00000420401 RASL10AQ92737 203 aa12.75□□□□□ -0.37
ECHDC3-202ENST00000420401 C11orf21Q9P2W6 132 aa12.75□□□□□ -0.37
ECHDC3-202ENST00000420401 SCO2A0A1W2PP80 73 aa12.74□□□□□ -0.37
ECHDC3-202ENST00000420401 FAM162BQ5T6X4 162 aa12.74□□□□□ -0.37
ECHDC3-202ENST00000420401 ZC2HC1AQ96GY0 325 aa12.74□□□□□ -0.37
ECHDC3-202ENST00000420401 H3BNG1 76 aa12.73□□□□□ -0.37
ECHDC3-202ENST00000420401 RNF212Q495C1 297 aa12.73□□□□□ -0.37
ECHDC3-202ENST00000420401 MUC4Q99102 2169 aa12.73□□□□□ -0.37
ECHDC3-202ENST00000420401 A0A0J9YY99 117 aa12.72□□□□□ -0.37
ECHDC3-202ENST00000420401 IGHV3-53P01767 116 aa12.72□□□□□ -0.37
ECHDC3-202ENST00000420401 ORM1P02763 201 aa12.72□□□□□ -0.37
ECHDC3-202ENST00000420401 TAGLN2P37802 199 aaKnown RBP12.72□□□□□ -0.37
ECHDC3-202ENST00000420401 SLAQ13239 276 aa12.72□□□□□ -0.37
ECHDC3-202ENST00000420401 ALKAL2Q6UX46 152 aa12.72□□□□□ -0.37
ECHDC3-202ENST00000420401 DNAH6Q9C0G6 4158 aa12.71□□□□□ -0.37
ECHDC3-202ENST00000420401 SH2D1AO60880 128 aa12.71□□□□□ -0.37
ECHDC3-202ENST00000420401 CRIP1P50238 77 aa12.71□□□□□ -0.37
ECHDC3-202ENST00000420401 BLOC1S1P78537 153 aa12.71□□□□□ -0.37
ECHDC3-202ENST00000420401 BAGE2Q86Y30 109 aa12.71□□□□□ -0.37
ECHDC3-202ENST00000420401 IGKV3D-20A0A0C4DH25 116 aa12.7□□□□□ -0.38
ECHDC3-202ENST00000420401 B4DEV8 164 aa12.7□□□□□ -0.38
ECHDC3-202ENST00000420401 PDE6DO43924 150 aa12.7□□□□□ -0.38
ECHDC3-202ENST00000420401 S100A4P26447 101 aaKnown RBP12.7□□□□□ -0.38
ECHDC3-202ENST00000420401 MEF2BQ02080 365 aaPredicted RBP12.7□□□□□ -0.38
ECHDC3-202ENST00000420401 ZNF674Q2M3X9 581 aa12.7□□□□□ -0.38
ECHDC3-202ENST00000420401 C11orf52Q96A22 123 aa12.7□□□□□ -0.38
ECHDC3-202ENST00000420401 C9orf85Q96MD7 179 aa12.7□□□□□ -0.38
ECHDC3-202ENST00000420401 BOLA1Q9Y3E2 137 aa12.7□□□□□ -0.38
ECHDC3-202ENST00000420401 TRAV4A0A0B4J268 109 aa12.69□□□□□ -0.38
ECHDC3-202ENST00000420401 TRGV4A0A0C4DH28 118 aa12.69□□□□□ -0.38
ECHDC3-202ENST00000420401 BCL2P10415 239 aa12.69□□□□□ -0.38
ECHDC3-202ENST00000420401 ASIPP42127 132 aa12.69□□□□□ -0.38
ECHDC3-202ENST00000420401 RPL35P42766 123 aaKnown RBP12.69□□□□□ -0.38
ECHDC3-202ENST00000420401 CCL18P55774 89 aa12.69□□□□□ -0.38
ECHDC3-202ENST00000420401 FAM3BP58499 235 aaPredicted RBP12.69□□□□□ -0.38
ECHDC3-202ENST00000420401 FHL2Q14192 279 aa12.69□□□□□ -0.38
ECHDC3-202ENST00000420401 ZNF876PQ49A33 203 aa12.69□□□□□ -0.38
ECHDC3-202ENST00000420401 NHLRC2Q8NBF2 726 aa12.69□□□□□ -0.38
ECHDC3-202ENST00000420401 OR4C5Q8NGB2 326 aa12.69□□□□□ -0.38
ECHDC3-202ENST00000420401 VSIG2Q96IQ7 327 aa12.69□□□□□ -0.38
ECHDC3-202ENST00000420401 PRO0255Q9UI72 69 aa12.69□□□□□ -0.38
ECHDC3-202ENST00000420401 VAX2Q9UIW0 290 aa12.69□□□□□ -0.38
ECHDC3-202ENST00000420401 HHLA3Q9XRX5 114 aa12.69□□□□□ -0.38
ECHDC3-202ENST00000420401 KRBOX1C9JBD0 128 aa12.68□□□□□ -0.38
ECHDC3-202ENST00000420401 C9JCJ5 164 aa12.68□□□□□ -0.38
ECHDC3-202ENST00000420401 PAX4O43316 350 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms