RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 NDUFAF1Q9Y375 327 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 CAMSAP2Q08AD1 1489 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 TCOF1Q13428 1488 aaKnown RBP-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 ITPR3Q14573 2671 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 PTPRFP10586 1907 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 APC2O95996 2303 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 SIP14410 1827 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 UNC13BO14795 1591 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 SYNMO15061 1565 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 MYO7AQ13402 2215 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 N4BP2Q86UW6 1770 aaPredicted RBP-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 ACANP16112 2415 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 DLC1Q96QB1 1528 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 SPTBN4Q9H254 2564 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 PIEZO2Q9H5I5 2752 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 A0A087WTM6 91 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 TMEM30CPA0ZSE6 113 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 C10orf142B7Z368 130 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 C5orf58C9J3I9 102 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 EDF1O60869 148 aaKnown RBP-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 IFNA21P01568 189 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 IL7P13232 177 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 EVI2AP22794 236 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 KDELR1P24390 212 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 PI4KAP42356 2102 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 GTF2A1P52655 376 aaPredicted RBP-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 DNAJB13P59910 316 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 ELOF1P60002 83 aaKnown RBP-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 RHOHQ15669 191 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 IQCJQ1A5X6 159 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 TMEM244Q5VVB8 128 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 SPINK6Q6UWN8 80 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 OR9Q1Q8NGQ5 310 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 MCEEQ96PE7 176 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 LXNQ9BS40 222 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 DDA1Q9BW61 102 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 C19orf12Q9NSK7 152 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 ATPIF1Q9UII2 106 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 LAMTOR2Q9Y2Q5 125 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 DNAJC15Q9Y5T4 150 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 WNK2Q9Y3S1 2297 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 YTHDC2Q9H6S0 1430 aaKnown RBP-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 KDM6BO15054 1643 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 MED13LQ71F56 2210 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 SPTA1P02549 2419 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 PKD1L1Q8TDX9 2849 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 MXRA5Q9NR99 2828 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 CELSR1Q9NYQ6 3014 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 TGP01266 2768 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 MYO18BQ8IUG5 2567 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 EPG5Q9HCE0 2579 aa-0.06□□□□□ -2.42
TRAPPC13-203ENST00000415825 CELSR2Q9HCU4 2923 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 AHCTF1Q8WYP5 2266 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 EP300Q09472 2414 aaPredicted RBP-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 A2MP01023 1474 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 NCAPD3P42695 1498 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 SPTBN2O15020 2390 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 IGHV1-24A0A0C4DH33 117 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 A0A0G2JMM0 328 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 LOC107986453A0A1B0GWG9 222 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 BBIP1A8MTZ0 92 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 HIGD1CA8MV81 97 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 E7EQ34 232 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 UQCRQO14949 82 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 TPST1O60507 370 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 TNFSF15O95150 251 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 CCKP06307 115 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 MPC1LP0DKB6 136 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 B2MP61769 119 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 RPS28P62857 69 aaKnown RBP-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 TFAMQ00059 246 aaKnown RBP-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 EMX2Q04743 252 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 CCSMST1Q4G0I0 132 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 TOMM20LQ6UXN7 152 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 TMEM91Q6ZNR0 172 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 C3orf62Q6ZUJ4 267 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 OR4S1Q8NGB4 309 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 DMAC1Q96GE9 116 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 CENPHQ9H3R5 247 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 PROK2Q9HC23 129 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 KMT2AQ03164 3969 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 FASNP49327 2511 aaKnown RBP-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 PTPRGP23470 1445 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 ARHGAP31Q2M1Z3 1444 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 ESPL1Q14674 2120 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 FLNBO75369 2602 aaKnown RBP-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 ATRQ13535 2644 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 ROCK1Q13464 1354 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 MED23Q9ULK4 1368 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 CHD6Q8TD26 2715 aa-0.07□□□□□ -2.42
TRAPPC13-203ENST00000415825 TANC2Q9HCD6 1990 aa-0.08□□□□□ -2.42
TRAPPC13-203ENST00000415825 LAMA2P24043 3122 aaKnown RBP-0.08□□□□□ -2.42
TRAPPC13-203ENST00000415825 USP9YO00507 2555 aaPredicted RBP-0.08□□□□□ -2.42
TRAPPC13-203ENST00000415825 CHD8Q9HCK8 2581 aa-0.08□□□□□ -2.42
TRAPPC13-203ENST00000415825 MYH3P11055 1940 aa-0.08□□□□□ -2.42
TRAPPC13-203ENST00000415825 MYH2Q9UKX2 1941 aa-0.08□□□□□ -2.42
TRAPPC13-203ENST00000415825 WDR87Q6ZQQ6 2873 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms