RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 ZNF727A8MUV8 499 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 H3BQ15 152 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 BUB1B-PAK6H3BSN5 160 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 H7C2Y5 167 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 K7EIM0 57 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 M0R1W7 72 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 MPDU1O75352 247 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 IFNA5P01569 189 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 APOA2P02652 100 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 PRB1P04280 392 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 REG1AP05451 166 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 CRYBA1P05813 215 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 PFN1P07737 140 aaKnown RBP1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 ARL14EPLP0DKL9 152 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 INAFM2P0DMQ5 153 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 LGALS3P17931 250 aaKnown RBP1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 GCHFRP30047 84 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 CDC34P49427 236 aaPredicted RBP1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 HBG1P69891 147 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 HBG2P69892 147 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 ELOBQ15370 118 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 RHEBQ15382 184 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 ATP6V1FQ16864 119 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 RTL8BQ17RB0 113 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 KLK9Q2XQG4 91 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 KHDC3LQ587J8 217 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 AKR1C8PQ5T2L2 129 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 FAM104BQ5XKR9 115 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 MORN3Q6PF18 240 aaPredicted RBP1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 SPNS3Q6ZMD2 512 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 MIR17HGQ75NE6 70 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 TMEM144Q7Z5S9 345 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 OR10P1Q8NGE3 313 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 OR8B3Q8NGG8 313 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 OR4A5Q8NH83 315 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 Q8WTZ3 238 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 SFT2D1Q8WV19 159 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 FXYD5Q96DB9 178 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 MALSU1Q96EH3 234 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 IGF2BP2-AS1Q96M15 143 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 CIB3Q96Q77 187 aaPredicted RBP1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 OR8B2Q96RD0 313 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 DERL1Q9BUN8 251 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 GGACTQ9BVM4 153 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 BPESC1Q9GZL8 116 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 SLC35B3Q9H1N7 401 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 FBXL15Q9H469 300 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 SMDT1Q9H4I9 107 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 TUBA4BQ9H853 241 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 SLC39A9Q9NUM3 307 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 GNG13Q9P2W3 67 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 KLK9Q9UKQ9 250 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 PRNDQ9UKY0 176 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 PRELID3BQ9Y3B1 194 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 OR51B2Q9Y5P1 312 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 IGSF10Q6WRI0 2623 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 CHD8Q9HCK8 2581 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 LAMA5O15230 3695 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 DOPEY1Q5JWR5 2465 aa1.73□□□□□ -2.13
HMGB1P11-201ENST00000413899 ADGRG4Q8IZF6 3080 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 UBR5O95071 2799 aaPredicted RBP1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 CFAP46Q8IYW2 2715 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 TGIF2-C20orf24A0A0A6YYL0 155 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 TRAV5A0A0B4J249 113 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 A0A1W2PNN7 141 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 TCRBV4S1A1TA0A5B7 111 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 TMEM250H0YL14 139 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 H3BRN7 92 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 I3L2K1 104 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 K7EN84 100 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 HRASP01112 189 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 IFNA10P01566 189 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 IFNA17P01571 189 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 PRH1P02810 166 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 IGLC1P0CG04 106 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 APELAP0DMC3 54 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 PRTN3P24158 256 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 OR10J1P30954 320 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 RPL27AP46776 148 aaKnown RBP1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 RAB13P51153 203 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 B2MP61769 119 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 RAB11AP62491 216 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 RPL18AQ02543 176 aaKnown RBP1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 ZNF90Q03938 601 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 PEA15Q15121 130 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 ACOT6Q3I5F7 207 aaPredicted RBP1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 CLEC2AQ6UVW9 174 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 LINC00336Q6ZUF6 198 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 VMO1Q7Z5L0 202 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 SLC35E3Q7Z769 313 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 OR4C13Q8NGP0 309 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 OR10X1Q8NGY0 326 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 UBE2E2Q96LR5 201 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 HSPB9Q9BQS6 159 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 MANBALQ9NQG1 85 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 VAX2Q9UIW0 290 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 PUS1Q9Y606 427 aaKnown RBP eCLIP1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 SOX21Q9Y651 276 aaPredicted RBP1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 ARL2-SNX15V9GYD0 113 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms