RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 LY6G5BQ8NDX9 201 aa3.96□□□□□ -1.78
HERC4-205ENST00000412272 CCDC140Q96MF4 163 aa3.96□□□□□ -1.78
HERC4-205ENST00000412272 PSMG3-AS1Q96PY0 264 aa3.96□□□□□ -1.78
HERC4-205ENST00000412272 C8orf87E5RJ46 101 aa3.96□□□□□ -1.78
HERC4-205ENST00000412272 COX6B1P14854 86 aa3.96□□□□□ -1.78
HERC4-205ENST00000412272 TCF15Q12870 199 aa3.96□□□□□ -1.78
HERC4-205ENST00000412272 PVRIGQ6DKI7 326 aa3.96□□□□□ -1.78
HERC4-205ENST00000412272 CD164L2Q6UWJ8 174 aa3.96□□□□□ -1.78
HERC4-205ENST00000412272 Q86TA4 180 aa3.96□□□□□ -1.78
HERC4-205ENST00000412272 IGKV1OR2-108A0A075B7D4 117 aa3.96□□□□□ -1.78
HERC4-205ENST00000412272 IGLV2-11P01706 119 aa3.96□□□□□ -1.78
HERC4-205ENST00000412272 IGHV3-13P01766 116 aa3.96□□□□□ -1.78
HERC4-205ENST00000412272 IGHV3-30P01768 117 aa3.96□□□□□ -1.78
HERC4-205ENST00000412272 IGHV3-30-5P0DP03 117 aa3.96□□□□□ -1.78
HERC4-205ENST00000412272 NRACQ8N912 160 aa3.96□□□□□ -1.78
HERC4-205ENST00000412272 PAXXQ9BUH6 204 aa3.96□□□□□ -1.78
HERC4-205ENST00000412272 A0A0B4J2C4 111 aa3.95□□□□□ -1.78
HERC4-205ENST00000412272 D6R8Y8 96 aa3.95□□□□□ -1.78
HERC4-205ENST00000412272 J3QT63 122 aa3.95□□□□□ -1.78
HERC4-205ENST00000412272 C16orf47Q6ZP98 133 aaPredicted RBP3.95□□□□□ -1.78
HERC4-205ENST00000412272 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.95□□□□□ -1.78
HERC4-205ENST00000412272 TMEM75Q8N9X5 138 aa3.95□□□□□ -1.78
HERC4-205ENST00000412272 TMEM263Q8WUH6 116 aaKnown RBP3.95□□□□□ -1.78
HERC4-205ENST00000412272 ZNF71Q9NQZ8 489 aaPredicted RBP3.95□□□□□ -1.78
HERC4-205ENST00000412272 IGHV4-39P01824 125 aa3.95□□□□□ -1.78
HERC4-205ENST00000412272 CNFNQ9BYD5 112 aa3.95□□□□□ -1.78
HERC4-205ENST00000412272 MOB4Q9Y3A3 225 aa3.95□□□□□ -1.78
HERC4-205ENST00000412272 TET2Q6N021 2002 aaPredicted RBP3.95□□□□□ -1.78
HERC4-205ENST00000412272 TMEM30CPA0ZSE6 113 aa3.95□□□□□ -1.78
HERC4-205ENST00000412272 USP17L23D6RBM5 183 aa3.95□□□□□ -1.78
HERC4-205ENST00000412272 PRSS1P07477 247 aa3.95□□□□□ -1.78
HERC4-205ENST00000412272 WDR86Q86TI4 376 aa3.95□□□□□ -1.78
HERC4-205ENST00000412272 SPATA3Q8NHX4 192 aa3.95□□□□□ -1.78
HERC4-205ENST00000412272 MYO15AQ9UKN7 3530 aa3.95□□□□□ -1.78
HERC4-205ENST00000412272 IGLV2-18A0A075B6J9 118 aa3.94□□□□□ -1.78
HERC4-205ENST00000412272 ARMS2P0C7Q2 107 aa3.94□□□□□ -1.78
HERC4-205ENST00000412272 ZNF32P17041 273 aa3.94□□□□□ -1.78
HERC4-205ENST00000412272 PRCDQ00LT1 54 aa3.94□□□□□ -1.78
HERC4-205ENST00000412272 TMEM14CQ9P0S9 112 aa3.94□□□□□ -1.78
HERC4-205ENST00000412272 SZT2Q5T011 3432 aa3.94□□□□□ -1.78
HERC4-205ENST00000412272 A0A087WWL8 130 aa3.94□□□□□ -1.78
HERC4-205ENST00000412272 GP9P14770 177 aa3.94□□□□□ -1.78
HERC4-205ENST00000412272 ZNF134P52741 427 aa3.94□□□□□ -1.78
HERC4-205ENST00000412272 Q9H3A6 140 aa3.94□□□□□ -1.78
HERC4-205ENST00000412272 LAMTOR3Q9UHA4 124 aa3.94□□□□□ -1.78
HERC4-205ENST00000412272 CACNA1DQ01668 2161 aa3.94□□□□□ -1.78
HERC4-205ENST00000412272 TRBV19A0A075B6N1 114 aa3.94□□□□□ -1.78
HERC4-205ENST00000412272 WNT9BO14905 357 aa3.94□□□□□ -1.78
HERC4-205ENST00000412272 XCL1P47992 114 aa3.94□□□□□ -1.78
HERC4-205ENST00000412272 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.94□□□□□ -1.78
HERC4-205ENST00000412272 XCL2Q9UBD3 114 aa3.94□□□□□ -1.78
HERC4-205ENST00000412272 A0A0J9YY99 117 aa3.94□□□□□ -1.78
HERC4-205ENST00000412272 TRBV30A0A0K0K1B3 111 aa3.94□□□□□ -1.78
HERC4-205ENST00000412272 A0A1W2PP55 124 aa3.94□□□□□ -1.78
HERC4-205ENST00000412272 C12orf77C9JDV5 145 aa3.94□□□□□ -1.78
HERC4-205ENST00000412272 E7EUB6 86 aa3.94□□□□□ -1.78
HERC4-205ENST00000412272 PATE2Q6UY27 113 aa3.94□□□□□ -1.78
HERC4-205ENST00000412272 S1PR3Q99500 378 aa3.94□□□□□ -1.78
HERC4-205ENST00000412272 BPESC1Q9GZL8 116 aa3.94□□□□□ -1.78
HERC4-205ENST00000412272 COL6A3P12111 3177 aa3.93□□□□□ -1.78
HERC4-205ENST00000412272 FAM229BQ4G0N7 80 aa3.93□□□□□ -1.78
HERC4-205ENST00000412272 MRPL51Q4U2R6 128 aaKnown RBP3.93□□□□□ -1.78
HERC4-205ENST00000412272 MORN5Q5VZ52 161 aa3.93□□□□□ -1.78
HERC4-205ENST00000412272 GUSBP11Q6P575 273 aa3.93□□□□□ -1.78
HERC4-205ENST00000412272 DEC1Q9P2X7 70 aa3.93□□□□□ -1.78
HERC4-205ENST00000412272 SPINK9Q5DT21 86 aa3.93□□□□□ -1.78
HERC4-205ENST00000412272 C10orf113Q5VZT2 155 aa3.93□□□□□ -1.78
HERC4-205ENST00000412272 KTN1-AS1Q86SY8 53 aa3.93□□□□□ -1.78
HERC4-205ENST00000412272 CCL4L1Q8NHW4 92 aa3.93□□□□□ -1.78
HERC4-205ENST00000412272 IGHV1-58A0A0C4DH39 117 aa3.93□□□□□ -1.78
HERC4-205ENST00000412272 A0A1W2PNR3 127 aa3.93□□□□□ -1.78
HERC4-205ENST00000412272 TMEM223A0PJW6 202 aa3.93□□□□□ -1.78
HERC4-205ENST00000412272 TRIAP1O43715 76 aa3.93□□□□□ -1.78
HERC4-205ENST00000412272 PROP1O75360 226 aa3.93□□□□□ -1.78
HERC4-205ENST00000412272 C11orf68Q9H3H3 251 aaKnown RBP3.93□□□□□ -1.78
HERC4-205ENST00000412272 IGLV3-12A0A075B6K2 115 aa3.92□□□□□ -1.78
HERC4-205ENST00000412272 A0A087WVE0 104 aa3.92□□□□□ -1.78
HERC4-205ENST00000412272 ZNF815PA8K554 130 aa3.92□□□□□ -1.78
HERC4-205ENST00000412272 NDUFA3O95167 84 aa3.92□□□□□ -1.78
HERC4-205ENST00000412272 RSPO4Q2I0M5 234 aaPredicted RBP3.92□□□□□ -1.78
HERC4-205ENST00000412272 DEFB110Q30KQ9 67 aa3.92□□□□□ -1.78
HERC4-205ENST00000412272 LYPD1Q8N2G4 141 aa3.92□□□□□ -1.78
HERC4-205ENST00000412272 TIMM21Q9BVV7 248 aa3.92□□□□□ -1.78
HERC4-205ENST00000412272 IGKV1D-37A0A075B6S9 117 aa3.92□□□□□ -1.78
HERC4-205ENST00000412272 IGHV1-45A0A0A0MS14 117 aa3.92□□□□□ -1.78
HERC4-205ENST00000412272 RBM3P98179 157 aaKnown RBP3.92□□□□□ -1.78
HERC4-205ENST00000412272 BEAN1Q3B7T3 259 aa3.92□□□□□ -1.78
HERC4-205ENST00000412272 Q6ZS46 218 aa3.92□□□□□ -1.78
HERC4-205ENST00000412272 RNF185Q96GF1 192 aa3.92□□□□□ -1.78
HERC4-205ENST00000412272 CTSZQ9UBR2 303 aa3.92□□□□□ -1.78
HERC4-205ENST00000412272 IBA57-AS1B1ANH7 110 aa3.92□□□□□ -1.78
HERC4-205ENST00000412272 PRSS2P07478 247 aa3.92□□□□□ -1.78
HERC4-205ENST00000412272 IGFL3Q6UXB1 125 aa3.92□□□□□ -1.78
HERC4-205ENST00000412272 COPS9Q8WXC6 57 aa3.92□□□□□ -1.78
HERC4-205ENST00000412272 IGHV3OR16-10A0A075B7F0 116 aa3.91□□□□□ -1.78
HERC4-205ENST00000412272 CCL24O00175 119 aa3.91□□□□□ -1.78
HERC4-205ENST00000412272 CXXC4Q9H2H0 198 aa3.91□□□□□ -1.78
HERC4-205ENST00000412272 DYNLRB1Q9NP97 96 aa3.91□□□□□ -1.78
HERC4-205ENST00000412272 FER1L5A0AVI2 2057 aa3.91□□□□□ -1.78
HERC4-205ENST00000412272 F8VRH5 84 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms