RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 ZNF124Q15973 351 aa8.61□□□□□ -1.03
SNRNP35-202ENST00000412157 SHISA2Q6UWI4 295 aa8.61□□□□□ -1.03
SNRNP35-202ENST00000412157 FAM110AQ9BQ89 295 aa8.61□□□□□ -1.03
SNRNP35-202ENST00000412157 GNB1LQ9BYB4 327 aa8.61□□□□□ -1.03
SNRNP35-202ENST00000412157 SORL1Q92673 2214 aa8.61□□□□□ -1.03
SNRNP35-202ENST00000412157 IGKV3D-20A0A0C4DH25 116 aa8.6□□□□□ -1.03
SNRNP35-202ENST00000412157 A0A1B0GW15 77 aa8.6□□□□□ -1.03
SNRNP35-202ENST00000412157 M0R2Z0 102 aa8.6□□□□□ -1.03
SNRNP35-202ENST00000412157 AMBPP02760 352 aa8.6□□□□□ -1.03
SNRNP35-202ENST00000412157 CTRLP40313 264 aa8.6□□□□□ -1.03
SNRNP35-202ENST00000412157 FABP9Q0Z7S8 132 aa8.6□□□□□ -1.03
SNRNP35-202ENST00000412157 BEAN1Q3B7T3 259 aa8.6□□□□□ -1.03
SNRNP35-202ENST00000412157 GFI1BQ5VTD9 330 aa8.6□□□□□ -1.03
SNRNP35-202ENST00000412157 LYZL1Q6UWQ5 148 aa8.6□□□□□ -1.03
SNRNP35-202ENST00000412157 FAM159AQ6UWV7 190 aa8.6□□□□□ -1.03
SNRNP35-202ENST00000412157 AMTNQ6UX39 209 aa8.6□□□□□ -1.03
SNRNP35-202ENST00000412157 CLUHP3Q96NS8 147 aa8.6□□□□□ -1.03
SNRNP35-202ENST00000412157 MRPL18Q9H0U6 180 aaKnown RBP8.6□□□□□ -1.03
SNRNP35-202ENST00000412157 C11orf21Q9P2W6 132 aa8.6□□□□□ -1.03
SNRNP35-202ENST00000412157 TRAV12-2A0A075B6T6 113 aa8.59□□□□□ -1.03
SNRNP35-202ENST00000412157 TRAV12-3A0A0B4J271 114 aa8.59□□□□□ -1.03
SNRNP35-202ENST00000412157 A0A1B0GXF2 115 aa8.59□□□□□ -1.03
SNRNP35-202ENST00000412157 S100A6P06703 90 aa8.59□□□□□ -1.03
SNRNP35-202ENST00000412157 ARMS2P0C7Q2 107 aa8.59□□□□□ -1.03
SNRNP35-202ENST00000412157 IGLC6P0CF74 106 aa8.59□□□□□ -1.03
SNRNP35-202ENST00000412157 S100A4P26447 101 aaKnown RBP8.59□□□□□ -1.03
SNRNP35-202ENST00000412157 ASIPP42127 132 aa8.59□□□□□ -1.03
SNRNP35-202ENST00000412157 CAMPP49913 170 aa8.59□□□□□ -1.03
SNRNP35-202ENST00000412157 FXYD7P58549 80 aa8.59□□□□□ -1.03
SNRNP35-202ENST00000412157 KIR3DS1Q14943 382 aa8.59□□□□□ -1.03
SNRNP35-202ENST00000412157 ANXA2RQ3ZCQ2 193 aa8.59□□□□□ -1.03
SNRNP35-202ENST00000412157 MUC21Q5SSG8 566 aa8.59□□□□□ -1.03
SNRNP35-202ENST00000412157 TMEM136Q6ZRR5 245 aa8.59□□□□□ -1.03
SNRNP35-202ENST00000412157 KCNS1Q96KK3 526 aa8.59□□□□□ -1.03
SNRNP35-202ENST00000412157 F2Z2F3 143 aa8.58□□□□□ -1.04
SNRNP35-202ENST00000412157 CD7P09564 240 aa8.58□□□□□ -1.04
SNRNP35-202ENST00000412157 TRGC1P0CF51 173 aa8.58□□□□□ -1.04
SNRNP35-202ENST00000412157 Q6ZQT7 251 aa8.58□□□□□ -1.04
SNRNP35-202ENST00000412157 GTSCR1Q86UQ5 136 aa8.58□□□□□ -1.04
SNRNP35-202ENST00000412157 TENM1Q9UKZ4 2725 aa8.57□□□□□ -1.04
SNRNP35-202ENST00000412157 RBMY1BA6NDE4 496 aaKnown RBP8.57□□□□□ -1.04
SNRNP35-202ENST00000412157 RBMY1EA6NEQ0 496 aaKnown RBP8.57□□□□□ -1.04
SNRNP35-202ENST00000412157 INSP01308 110 aa8.57□□□□□ -1.04
SNRNP35-202ENST00000412157 APCSP02743 223 aa8.57□□□□□ -1.04
SNRNP35-202ENST00000412157 RBMY1DP0C7P1 496 aaKnown RBP8.57□□□□□ -1.04
SNRNP35-202ENST00000412157 FRMD6-AS1P0C7T7 363 aa8.57□□□□□ -1.04
SNRNP35-202ENST00000412157 MED14OSP0DP75 135 aa8.57□□□□□ -1.04
SNRNP35-202ENST00000412157 NUTF2P61970 127 aaKnown RBP8.57□□□□□ -1.04
SNRNP35-202ENST00000412157 CACNG7P62955 275 aa8.57□□□□□ -1.04
SNRNP35-202ENST00000412157 TRPT1Q86TN4 253 aaKnown RBP8.57□□□□□ -1.04
SNRNP35-202ENST00000412157 IGHV1OR15-1A0A075B7D0 117 aa8.56□□□□□ -1.04
SNRNP35-202ENST00000412157 H3BVH4 76 aa8.56□□□□□ -1.04
SNRNP35-202ENST00000412157 SNAI2O43623 268 aa8.56□□□□□ -1.04
SNRNP35-202ENST00000412157 OR5AL1P0C617 328 aa8.56□□□□□ -1.04
SNRNP35-202ENST00000412157 DNLZQ5SXM8 178 aa8.56□□□□□ -1.04
SNRNP35-202ENST00000412157 WFDC9Q8NEX5 89 aa8.56□□□□□ -1.04
SNRNP35-202ENST00000412157 C20orf144Q9BQM9 153 aa8.56□□□□□ -1.04
SNRNP35-202ENST00000412157 TIMM8BQ9Y5J9 83 aaPredicted RBP8.56□□□□□ -1.04
SNRNP35-202ENST00000412157 MEGF8Q7Z7M0 2845 aa8.55□□□□□ -1.04
SNRNP35-202ENST00000412157 TRGV11A0A075B6L2 103 aa8.55□□□□□ -1.04
SNRNP35-202ENST00000412157 PHOX2AO14813 284 aa8.55□□□□□ -1.04
SNRNP35-202ENST00000412157 HIST1H2BKO60814 126 aa8.55□□□□□ -1.04
SNRNP35-202ENST00000412157 ZNF324O75467 553 aaPredicted RBP8.55□□□□□ -1.04
SNRNP35-202ENST00000412157 HIST1H2BJP06899 126 aa8.55□□□□□ -1.04
SNRNP35-202ENST00000412157 HIST1H2BOP23527 126 aa8.55□□□□□ -1.04
SNRNP35-202ENST00000412157 HIST1H2BBP33778 126 aa8.55□□□□□ -1.04
SNRNP35-202ENST00000412157 HIST1H2BDP58876 126 aa8.55□□□□□ -1.04
SNRNP35-202ENST00000412157 SSTP61278 116 aa8.55□□□□□ -1.04
SNRNP35-202ENST00000412157 HIST1H2BCP62807 126 aa8.55□□□□□ -1.04
SNRNP35-202ENST00000412157 TWIST1Q15672 202 aa8.55□□□□□ -1.04
SNRNP35-202ENST00000412157 HIST2H2BEQ16778 126 aa8.55□□□□□ -1.04
SNRNP35-202ENST00000412157 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.55□□□□□ -1.04
SNRNP35-202ENST00000412157 SPANXN1Q5VSR9 72 aa8.55□□□□□ -1.04
SNRNP35-202ENST00000412157 GATD1Q8NB37 220 aa8.55□□□□□ -1.04
SNRNP35-202ENST00000412157 HIST1H2BHQ93079 126 aa8.55□□□□□ -1.04
SNRNP35-202ENST00000412157 HIST1H2BNQ99877 126 aa8.55□□□□□ -1.04
SNRNP35-202ENST00000412157 HIST1H2BMQ99879 126 aa8.55□□□□□ -1.04
SNRNP35-202ENST00000412157 CNFNQ9BYD5 112 aa8.55□□□□□ -1.04
SNRNP35-202ENST00000412157 MGAM2Q2M2H8 2515 aa8.54□□□□□ -1.04
SNRNP35-202ENST00000412157 MUC21A0A0G2JKD1 596 aa8.54□□□□□ -1.04
SNRNP35-202ENST00000412157 MUC21A0A140T8X8 626 aa8.54□□□□□ -1.04
SNRNP35-202ENST00000412157 CRXO43186 299 aaPredicted RBP8.54□□□□□ -1.04
SNRNP35-202ENST00000412157 IGLL1P15814 213 aa8.54□□□□□ -1.04
SNRNP35-202ENST00000412157 NDUFA6P56556 154 aa8.54□□□□□ -1.04
SNRNP35-202ENST00000412157 TDRG1Q3Y452 100 aa8.54□□□□□ -1.04
SNRNP35-202ENST00000412157 MORN3Q6PF18 240 aaPredicted RBP8.54□□□□□ -1.04
SNRNP35-202ENST00000412157 SMIM15Q7Z3B0 74 aa8.54□□□□□ -1.04
SNRNP35-202ENST00000412157 SSBP4Q9BWG4 385 aaPredicted RBP8.54□□□□□ -1.04
SNRNP35-202ENST00000412157 WFDC10AQ9H1F0 79 aa8.54□□□□□ -1.04
SNRNP35-202ENST00000412157 C19orf73Q9NVV2 129 aa8.54□□□□□ -1.04
SNRNP35-202ENST00000412157 PHLDA3Q9Y5J5 127 aa8.54□□□□□ -1.04
SNRNP35-202ENST00000412157 CBY3A6NI87 242 aa8.53□□□□□ -1.04
SNRNP35-202ENST00000412157 GNRH2O43555 120 aa8.53□□□□□ -1.04
SNRNP35-202ENST00000412157 RPL35AP18077 110 aaKnown RBP8.53□□□□□ -1.04
SNRNP35-202ENST00000412157 NTF3P20783 257 aa8.53□□□□□ -1.04
SNRNP35-202ENST00000412157 DEFA6Q01524 100 aa8.53□□□□□ -1.04
SNRNP35-202ENST00000412157 SLAQ13239 276 aa8.53□□□□□ -1.04
SNRNP35-202ENST00000412157 KIAA1644Q3SXP7 199 aa8.53□□□□□ -1.04
SNRNP35-202ENST00000412157 ZNF493Q6ZR52 646 aa8.53□□□□□ -1.04
SNRNP35-202ENST00000412157 ZNF575Q86XF7 245 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms