RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 UPK3BQ9BT76 320 aa11.16□□□□□ -0.62
AFF3-202ENST00000409236 TRBV19A0A075B6N1 114 aa11.15□□□□□ -0.62
AFF3-202ENST00000409236 C4orf48Q5BLP8 95 aa11.15□□□□□ -0.62
AFF3-202ENST00000409236 IGKV1-9A0A0C4DH69 117 aa11.15□□□□□ -0.62
AFF3-202ENST00000409236 IGLL5B9A064 214 aa11.15□□□□□ -0.62
AFF3-202ENST00000409236 ADAMTS7Q9UKP4 1686 aa11.15□□□□□ -0.62
AFF3-202ENST00000409236 DOPEY1Q5JWR5 2465 aa11.15□□□□□ -0.62
AFF3-202ENST00000409236 USP17L23D6RBM5 183 aa11.15□□□□□ -0.62
AFF3-202ENST00000409236 LGALS9O00182 355 aa11.15□□□□□ -0.62
AFF3-202ENST00000409236 SH2D6Q7Z4S9 175 aa11.15□□□□□ -0.62
AFF3-202ENST00000409236 MPLKIPQ8TAP9 179 aa11.15□□□□□ -0.62
AFF3-202ENST00000409236 C1orf53Q5VUE5 145 aa11.15□□□□□ -0.62
AFF3-202ENST00000409236 RNF152Q8N8N0 203 aa11.15□□□□□ -0.62
AFF3-202ENST00000409236 FAM27E3Q08E93 113 aa11.15□□□□□ -0.62
AFF3-202ENST00000409236 TMEM61Q8N0U2 210 aa11.15□□□□□ -0.62
AFF3-202ENST00000409236 IGLV3-32A0A0A0MS00 114 aa11.15□□□□□ -0.62
AFF3-202ENST00000409236 LYZL4Q96KX0 146 aa11.15□□□□□ -0.62
AFF3-202ENST00000409236 RFPL3SP0C7P2 107 aa11.14□□□□□ -0.63
AFF3-202ENST00000409236 TEX22C9J3V5 150 aa11.14□□□□□ -0.63
AFF3-202ENST00000409236 RPL18AQ02543 176 aaKnown RBP11.14□□□□□ -0.63
AFF3-202ENST00000409236 TIRAPP58753 221 aa11.14□□□□□ -0.63
AFF3-202ENST00000409236 PRR31Q5SQ13 230 aa11.14□□□□□ -0.63
AFF3-202ENST00000409236 C9orf47Q6ZRZ4 202 aa11.14□□□□□ -0.63
AFF3-202ENST00000409236 TRAV26-1A0A087WT03 109 aa11.14□□□□□ -0.63
AFF3-202ENST00000409236 COL11A2P13942 1736 aaPredicted RBP11.14□□□□□ -0.63
AFF3-202ENST00000409236 A0A1B0GUS0 222 aa11.14□□□□□ -0.63
AFF3-202ENST00000409236 PAQR4Q8N4S7 273 aaPredicted RBP11.14□□□□□ -0.63
AFF3-202ENST00000409236 TRAV26-2A0A0B4J265 109 aa11.14□□□□□ -0.63
AFF3-202ENST00000409236 LTAP01374 205 aa11.13□□□□□ -0.63
AFF3-202ENST00000409236 C11orf52Q96A22 123 aa11.13□□□□□ -0.63
AFF3-202ENST00000409236 IGLC1P0CG04 106 aa11.13□□□□□ -0.63
AFF3-202ENST00000409236 PRDM6Q9NQX0 595 aa11.13□□□□□ -0.63
AFF3-202ENST00000409236 C4orf51C9J302 202 aa11.13□□□□□ -0.63
AFF3-202ENST00000409236 SLC25A45Q8N413 288 aa11.13□□□□□ -0.63
AFF3-202ENST00000409236 ZNF503Q96F45 646 aa11.13□□□□□ -0.63
AFF3-202ENST00000409236 E9PQ18 207 aa11.13□□□□□ -0.63
AFF3-202ENST00000409236 PNRC2Q9NPJ4 139 aaKnown RBP11.13□□□□□ -0.63
AFF3-202ENST00000409236 HIGD1BQ9P298 99 aa11.13□□□□□ -0.63
AFF3-202ENST00000409236 ZFP36L1Q07352 338 aaKnown RBP11.13□□□□□ -0.63
AFF3-202ENST00000409236 DEFB121Q5J5C9 76 aa11.13□□□□□ -0.63
AFF3-202ENST00000409236 FOXE3Q13461 319 aa11.13□□□□□ -0.63
AFF3-202ENST00000409236 C3orf22Q8N5N4 141 aa11.13□□□□□ -0.63
AFF3-202ENST00000409236 B4DSR2 109 aa11.12□□□□□ -0.63
AFF3-202ENST00000409236 BUB3O43684 328 aa11.12□□□□□ -0.63
AFF3-202ENST00000409236 XCL1P47992 114 aa11.12□□□□□ -0.63
AFF3-202ENST00000409236 FGFBP3Q8TAT2 258 aa11.12□□□□□ -0.63
AFF3-202ENST00000409236 GATA3P23771 443 aa11.12□□□□□ -0.63
AFF3-202ENST00000409236 LINC00643Q86TS7 51 aa11.12□□□□□ -0.63
AFF3-202ENST00000409236 TMEM178BH3BS89 294 aa11.11□□□□□ -0.63
AFF3-202ENST00000409236 SND1-IT1Q9HBX3 110 aa11.11□□□□□ -0.63
AFF3-202ENST00000409236 IGKV1D-43A0A0B4J1Z2 117 aa11.11□□□□□ -0.63
AFF3-202ENST00000409236 RBAKDNA6NC62 111 aa11.11□□□□□ -0.63
AFF3-202ENST00000409236 ZNRF2Q8NHG8 242 aa11.11□□□□□ -0.63
AFF3-202ENST00000409236 A6NED7 52 aa11.11□□□□□ -0.63
AFF3-202ENST00000409236 SPINK13Q1W4C9 94 aa11.11□□□□□ -0.63
AFF3-202ENST00000409236 C11orf44Q8N8P7 122 aa11.11□□□□□ -0.63
AFF3-202ENST00000409236 IGKV1D-8A0A087WSZ0 117 aa11.11□□□□□ -0.63
AFF3-202ENST00000409236 PATE3B3GLJ2 98 aa11.11□□□□□ -0.63
AFF3-202ENST00000409236 IGHV1-46P01743 117 aa11.11□□□□□ -0.63
AFF3-202ENST00000409236 FOXF2Q12947 444 aa11.11□□□□□ -0.63
AFF3-202ENST00000409236 PRR25Q96S07 402 aa11.1□□□□□ -0.63
AFF3-202ENST00000409236 IGHV3-16A0A0C4DH30 117 aa11.1□□□□□ -0.63
AFF3-202ENST00000409236 DAZ2Q13117 558 aaKnown RBP11.1□□□□□ -0.63
AFF3-202ENST00000409236 DAZ4Q86SG3 579 aaKnown RBP11.1□□□□□ -0.63
AFF3-202ENST00000409236 DAZ3Q9NR90 486 aaKnown RBP11.1□□□□□ -0.63
AFF3-202ENST00000409236 MRPL53Q96EL3 112 aaKnown RBP11.1□□□□□ -0.63
AFF3-202ENST00000409236 IGHV1-69DA0A0B4J2H0 117 aa11.1□□□□□ -0.63
AFF3-202ENST00000409236 LINC00479Q96M42 142 aa11.1□□□□□ -0.63
AFF3-202ENST00000409236 MST1P26927 711 aa11.1□□□□□ -0.63
AFF3-202ENST00000409236 CYYR1Q96J86 154 aa11.1□□□□□ -0.63
AFF3-202ENST00000409236 CFHR1Q03591 330 aa11.09□□□□□ -0.63
AFF3-202ENST00000409236 KLK9Q9UKQ9 250 aa11.09□□□□□ -0.63
AFF3-202ENST00000409236 H0Y9J4 135 aa11.09□□□□□ -0.63
AFF3-202ENST00000409236 ZNF883P0CG24 379 aa11.09□□□□□ -0.63
AFF3-202ENST00000409236 C1orf195Q5TG92 126 aa11.09□□□□□ -0.63
AFF3-202ENST00000409236 RETNQ9HD89 108 aa11.09□□□□□ -0.63
AFF3-202ENST00000409236 COL18A1P39060 1754 aa11.09□□□□□ -0.63
AFF3-202ENST00000409236 TRBV10-2A0A0K0K1G8 114 aa11.09□□□□□ -0.63
AFF3-202ENST00000409236 LINC00473A8K010 186 aa11.09□□□□□ -0.63
AFF3-202ENST00000409236 ZC2HC1AQ96GY0 325 aa11.09□□□□□ -0.63
AFF3-202ENST00000409236 TRAV4A0A0B4J268 109 aa11.09□□□□□ -0.63
AFF3-202ENST00000409236 IGHV1-18A0A0C4DH31 117 aa11.09□□□□□ -0.63
AFF3-202ENST00000409236 LINC01619G3V211 115 aa11.09□□□□□ -0.63
AFF3-202ENST00000409236 H3BUX3 64 aa11.09□□□□□ -0.63
AFF3-202ENST00000409236 RNF183Q96D59 192 aa11.09□□□□□ -0.63
AFF3-202ENST00000409236 GFI1Q99684 422 aa11.09□□□□□ -0.63
AFF3-202ENST00000409236 EFNA4P52798 201 aa11.09□□□□□ -0.63
AFF3-202ENST00000409236 C10orf55Q5SWW7 151 aa11.09□□□□□ -0.63
AFF3-202ENST00000409236 KLF2Q9Y5W3 355 aaPredicted RBP11.09□□□□□ -0.63
AFF3-202ENST00000409236 PSPNO60542 156 aa11.08□□□□□ -0.64
AFF3-202ENST00000409236 TNS1Q9HBL0 1735 aaKnown RBP11.08□□□□□ -0.64
AFF3-202ENST00000409236 CFHR3Q02985 330 aa11.08□□□□□ -0.64
AFF3-202ENST00000409236 FANCD2OSQ96PS1 177 aa11.07□□□□□ -0.64
AFF3-202ENST00000409236 FAM110AQ9BQ89 295 aa11.07□□□□□ -0.64
AFF3-202ENST00000409236 ANKRD39Q53RE8 183 aa11.07□□□□□ -0.64
AFF3-202ENST00000409236 BRWD3Q6RI45 1802 aa11.07□□□□□ -0.64
AFF3-202ENST00000409236 C5orf63A6NC05 138 aa11.07□□□□□ -0.64
AFF3-202ENST00000409236 NDUFA4O00483 81 aa11.07□□□□□ -0.64
AFF3-202ENST00000409236 PRR30Q53SZ7 412 aaPredicted RBP11.07□□□□□ -0.64
AFF3-202ENST00000409236 VPREB1P12018 145 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms