RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 MRPL36Q9P0J6 103 aaKnown RBP3.87□□□□□ -1.79
SCN3A-203ENST00000409101 TRBV12-3P01733 135 aa3.87□□□□□ -1.79
SCN3A-203ENST00000409101 ORAOV1Q8WV07 137 aa3.87□□□□□ -1.79
SCN3A-203ENST00000409101 MYO7BQ6PIF6 2116 aa3.87□□□□□ -1.79
SCN3A-203ENST00000409101 TYMSP04818 313 aa3.86□□□□□ -1.79
SCN3A-203ENST00000409101 AMTNQ6UX39 209 aa3.86□□□□□ -1.79
SCN3A-203ENST00000409101 TMEM61Q8N0U2 210 aa3.86□□□□□ -1.79
SCN3A-203ENST00000409101 OBSL1O75147 1896 aa3.86□□□□□ -1.79
SCN3A-203ENST00000409101 BRWD1Q9NSI6 2320 aa3.86□□□□□ -1.79
SCN3A-203ENST00000409101 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.86□□□□□ -1.79
SCN3A-203ENST00000409101 hDV102S1A0JD36 115 aa3.86□□□□□ -1.79
SCN3A-203ENST00000409101 IGKV2-29A2NJV5 120 aaPredicted RBP3.86□□□□□ -1.79
SCN3A-203ENST00000409101 Q0VG73 95 aa3.86□□□□□ -1.79
SCN3A-203ENST00000409101 KIAA1549LQ6ZVL6 1849 aa3.86□□□□□ -1.79
SCN3A-203ENST00000409101 DEFB131BA0A096LNP1 70 aa3.86□□□□□ -1.79
SCN3A-203ENST00000409101 NDUFA7O95182 113 aa3.86□□□□□ -1.79
SCN3A-203ENST00000409101 LTAP01374 205 aa3.86□□□□□ -1.79
SCN3A-203ENST00000409101 ZFAND6Q6FIF0 208 aa3.86□□□□□ -1.79
SCN3A-203ENST00000409101 TMEM263Q8WUH6 116 aaKnown RBP3.86□□□□□ -1.79
SCN3A-203ENST00000409101 APC2O95996 2303 aa3.86□□□□□ -1.79
SCN3A-203ENST00000409101 SMIM9A6NGZ8 99 aa3.86□□□□□ -1.79
SCN3A-203ENST00000409101 LY6G6CO95867 125 aa3.86□□□□□ -1.79
SCN3A-203ENST00000409101 MRPL51Q4U2R6 128 aaKnown RBP3.86□□□□□ -1.79
SCN3A-203ENST00000409101 C20orf78Q9BR46 151 aa3.86□□□□□ -1.79
SCN3A-203ENST00000409101 ZNF702PQ9H963 129 aa3.86□□□□□ -1.79
SCN3A-203ENST00000409101 SPTA1P02549 2419 aa3.86□□□□□ -1.79
SCN3A-203ENST00000409101 A0A1B0GWB2 263 aa3.86□□□□□ -1.79
SCN3A-203ENST00000409101 KRTAP10-9P60411 292 aa3.86□□□□□ -1.79
SCN3A-203ENST00000409101 GAGE2BQ13066 116 aa3.86□□□□□ -1.79
SCN3A-203ENST00000409101 C4orf48Q5BLP8 95 aa3.86□□□□□ -1.79
SCN3A-203ENST00000409101 SFTA2Q6UW10 78 aa3.86□□□□□ -1.79
SCN3A-203ENST00000409101 C22orf34Q6ZV56 151 aa3.86□□□□□ -1.79
SCN3A-203ENST00000409101 IGLV10-54A0A075B6I4 117 aa3.86□□□□□ -1.79
SCN3A-203ENST00000409101 COX7A2LO14548 114 aa3.86□□□□□ -1.79
SCN3A-203ENST00000409101 IGF1P05019 195 aa3.86□□□□□ -1.79
SCN3A-203ENST00000409101 SPINK8P0C7L1 97 aa3.86□□□□□ -1.79
SCN3A-203ENST00000409101 UBE2AP49459 152 aa3.86□□□□□ -1.79
SCN3A-203ENST00000409101 ODF3L1Q8IXM7 274 aa3.86□□□□□ -1.79
SCN3A-203ENST00000409101 LINC01006Q8NI28 216 aa3.86□□□□□ -1.79
SCN3A-203ENST00000409101 LYRM9A8MSI8 78 aa3.85□□□□□ -1.79
SCN3A-203ENST00000409101 ESDP10768 282 aa3.85□□□□□ -1.79
SCN3A-203ENST00000409101 CTAG1AP78358 180 aa3.85□□□□□ -1.79
SCN3A-203ENST00000409101 GAGE2EQ4V326 116 aa3.85□□□□□ -1.79
SCN3A-203ENST00000409101 PSMG3-AS1Q96PY0 264 aa3.85□□□□□ -1.79
SCN3A-203ENST00000409101 SCRT2Q9NQ03 307 aa3.85□□□□□ -1.79
SCN3A-203ENST00000409101 GAGE2DQ9UEU5 116 aa3.85□□□□□ -1.79
SCN3A-203ENST00000409101 TRAV10A0A0B4J240 114 aa3.85□□□□□ -1.79
SCN3A-203ENST00000409101 RNASE13Q5GAN3 156 aaKnown RBP3.85□□□□□ -1.79
SCN3A-203ENST00000409101 SMIM2Q9BVW6 85 aa3.85□□□□□ -1.79
SCN3A-203ENST00000409101 PRR20EP86478 221 aa3.85□□□□□ -1.79
SCN3A-203ENST00000409101 PRR20CP86479 221 aa3.85□□□□□ -1.79
SCN3A-203ENST00000409101 PRR20DP86480 221 aa3.85□□□□□ -1.79
SCN3A-203ENST00000409101 PRR20BP86481 221 aa3.85□□□□□ -1.79
SCN3A-203ENST00000409101 PRR20AP86496 221 aa3.85□□□□□ -1.79
SCN3A-203ENST00000409101 DEFB114Q30KQ6 69 aa3.85□□□□□ -1.79
SCN3A-203ENST00000409101 UNQ9165/PRO28630Q6UXU0 137 aa3.85□□□□□ -1.79
SCN3A-203ENST00000409101 C5orf30Q96GV9 206 aa3.85□□□□□ -1.79
SCN3A-203ENST00000409101 SPCS1Q9Y6A9 102 aa3.85□□□□□ -1.79
SCN3A-203ENST00000409101 TRAV4A0A0B4J268 109 aa3.85□□□□□ -1.79
SCN3A-203ENST00000409101 SUMO4Q6EEV6 95 aa3.85□□□□□ -1.79
SCN3A-203ENST00000409101 LINC00482Q8N8I6 264 aa3.85□□□□□ -1.79
SCN3A-203ENST00000409101 ETDCA0A1B0GVM5 59 aa3.84□□□□□ -1.79
SCN3A-203ENST00000409101 HSD52Q0P140 79 aa3.84□□□□□ -1.79
SCN3A-203ENST00000409101 PRO0255Q9UI72 69 aa3.84□□□□□ -1.79
SCN3A-203ENST00000409101 TRAV8-4A0A0B4J246 113 aa3.84□□□□□ -1.79
SCN3A-203ENST00000409101 FAM231DQ6ZW35 169 aa3.84□□□□□ -1.79
SCN3A-203ENST00000409101 Q8N1Y9 231 aa3.84□□□□□ -1.79
SCN3A-203ENST00000409101 MAP1BP46821 2468 aaKnown RBP3.84□□□□□ -1.79
SCN3A-203ENST00000409101 PROP1O75360 226 aa3.84□□□□□ -1.79
SCN3A-203ENST00000409101 MIFP14174 115 aa3.84□□□□□ -1.79
SCN3A-203ENST00000409101 CYYR1Q96J86 154 aa3.84□□□□□ -1.79
SCN3A-203ENST00000409101 COX11Q9Y6N1 276 aa3.84□□□□□ -1.79
SCN3A-203ENST00000409101 SDK2Q58EX2 2172 aa3.84□□□□□ -1.8
SCN3A-203ENST00000409101 A0A087X0K7 114 aa3.84□□□□□ -1.8
SCN3A-203ENST00000409101 LINC01548A6NM66 108 aa3.84□□□□□ -1.8
SCN3A-203ENST00000409101 K7ERU9 68 aa3.84□□□□□ -1.8
SCN3A-203ENST00000409101 NDUFA1O15239 70 aa3.84□□□□□ -1.8
SCN3A-203ENST00000409101 C9orf47Q6ZRZ4 202 aa3.84□□□□□ -1.8
SCN3A-203ENST00000409101 SPANXA1Q9NS26 97 aa3.84□□□□□ -1.8
SCN3A-203ENST00000409101 PLXNB3Q9ULL4 1909 aa3.84□□□□□ -1.8
SCN3A-203ENST00000409101 TRBV24-1A0A075B6N3 115 aa3.84□□□□□ -1.8
SCN3A-203ENST00000409101 TRAV26-1A0A087WT03 109 aa3.84□□□□□ -1.8
SCN3A-203ENST00000409101 CRYGDP07320 174 aa3.84□□□□□ -1.8
SCN3A-203ENST00000409101 EGR2P11161 476 aaPredicted RBP3.84□□□□□ -1.8
SCN3A-203ENST00000409101 DDTP30046 118 aa3.84□□□□□ -1.8
SCN3A-203ENST00000409101 SLC25A29Q8N8R3 303 aa3.84□□□□□ -1.8
SCN3A-203ENST00000409101 VSIG2Q96IQ7 327 aa3.84□□□□□ -1.8
SCN3A-203ENST00000409101 CCDC140Q96MF4 163 aa3.84□□□□□ -1.8
SCN3A-203ENST00000409101 A0A0J9YX75 114 aa3.83□□□□□ -1.8
SCN3A-203ENST00000409101 SMIM27A0A1W2PRY6 76 aa3.83□□□□□ -1.8
SCN3A-203ENST00000409101 IGKV1-17P01599 117 aa3.83□□□□□ -1.8
SCN3A-203ENST00000409101 RBMY1FQ15415 496 aaKnown RBP3.83□□□□□ -1.8
SCN3A-203ENST00000409101 DENND4CQ5VZ89 1909 aa3.83□□□□□ -1.8
SCN3A-203ENST00000409101 H3BUT2 72 aa3.83□□□□□ -1.8
SCN3A-203ENST00000409101 CDSNQ15517 529 aa3.83□□□□□ -1.8
SCN3A-203ENST00000409101 TRBV7-3A0A075B6L6 115 aa3.83□□□□□ -1.8
SCN3A-203ENST00000409101 PRB2P02812 416 aaPredicted RBP3.83□□□□□ -1.8
SCN3A-203ENST00000409101 ZNF726P1Q15940 193 aa3.83□□□□□ -1.8
SCN3A-203ENST00000409101 FAM222AQ5U5X8 452 aa3.83□□□□□ -1.8
SCN3A-203ENST00000409101 C5orf38Q86SI9 138 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms